RNA–Protein interactions for RNA: ENST00000476237.5

NMD3-208, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 5

Gene NMD3, Length 685 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-208ENST00000476237 NISCHQ9Y2I1 1504 aa53.93■■■■■ 6.22
NMD3-208ENST00000476237 CCDC180Q9P1Z9 1646 aa48.07■■■■■ 5.29
NMD3-208ENST00000476237 ABCC9O60706 1549 aa47.53■■■■■ 5.2
NMD3-208ENST00000476237 RB1CC1Q8TDY2 1594 aa45.49■■■■■ 4.87
NMD3-208ENST00000476237 NACADO15069 1562 aa45.35■■■■■ 4.85
NMD3-208ENST00000476237 DCAF8L2P0C7V8 631 aa45.28■■■■■ 4.84
NMD3-208ENST00000476237 MYO15BQ96JP2 1530 aa44.95■■■■■ 4.79
NMD3-208ENST00000476237 ZCCHC6Q5VYS8 1495 aaKnown RBP44.82■■■■■ 4.77
NMD3-208ENST00000476237 DCAF1Q9Y4B6 1507 aa44.6■■■■■ 4.73
NMD3-208ENST00000476237 UNC13AQ9UPW8 1703 aa44.39■■■■■ 4.7
NMD3-208ENST00000476237 PABPN1Q86U42 306 aaKnown RBP eCLIP44.38■■■■■ 4.7
NMD3-208ENST00000476237 BICRAQ9NZM4 1560 aa44.15■■■■■ 4.66
NMD3-208ENST00000476237 DNAJC5BQ9UF47 199 aa44.09■■■■■ 4.65
NMD3-208ENST00000476237 SCRIBQ14160 1630 aa43.85■■■■■ 4.61
NMD3-208ENST00000476237 SHROOM4Q9ULL8 1493 aa43.64■■■■■ 4.58
NMD3-208ENST00000476237 EIF4G1Q04637 1599 aaKnown RBP43.01■■■■■ 4.48
NMD3-208ENST00000476237 CC2D2AQ9P2K1 1620 aa42.94■■■■■ 4.46
NMD3-208ENST00000476237 CECR2Q9BXF3 1484 aa42.75■■■■■ 4.43
NMD3-208ENST00000476237 SMARCA4P51532 1647 aa41.91■■■■■ 4.3
NMD3-208ENST00000476237 NCAPD3P42695 1498 aa41.89■■■■■ 4.3
NMD3-208ENST00000476237 ATAD2BQ9ULI0 1458 aa41.84■■■■■ 4.29
NMD3-208ENST00000476237 BAZ1AQ9NRL2 1556 aaPredicted RBP41.8■■■■■ 4.28
NMD3-208ENST00000476237 SMARCA2P51531 1590 aa41.73■■■■■ 4.27
NMD3-208ENST00000476237 HMGXB3Q12766 1538 aa41.59■■■■■ 4.25
NMD3-208ENST00000476237 MROH2BQ7Z745 1585 aa41.56■■■■■ 4.24
NMD3-208ENST00000476237 PEG3Q9GZU2 1588 aa41.52■■■■■ 4.24
NMD3-208ENST00000476237 BAZ1BQ9UIG0 1483 aaKnown RBP41.44■■■■■ 4.22
NMD3-208ENST00000476237 WIZO95785 1651 aa41.05■■■■■ 4.16
NMD3-208ENST00000476237 NESP48681 1621 aa41■■■■■ 4.15
NMD3-208ENST00000476237 ERCC6Q03468 1493 aa40.98■■■■■ 4.15
NMD3-208ENST00000476237 RSF1Q96T23 1441 aaPredicted RBP40.94■■■■■ 4.14
NMD3-208ENST00000476237 LAMC3Q9Y6N6 1575 aa40.8■■■■■ 4.12
NMD3-208ENST00000476237 CUX2O14529 1486 aa40.71■■■■■ 4.11
NMD3-208ENST00000476237 CADPSQ9ULU8 1353 aa40.65■■■■■ 4.1
NMD3-208ENST00000476237 TOP2AP11388 1531 aaKnown RBP40.6■■■■■ 4.09
NMD3-208ENST00000476237 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
NMD3-208ENST00000476237 THOC2Q8NI27 1593 aaKnown RBP40.44■■■■■ 4.06
NMD3-208ENST00000476237 KIF21AQ7Z4S6 1674 aa40.43■■■■■ 4.06
NMD3-208ENST00000476237 CFTRP13569 1480 aa40.31■■■■■ 4.04
NMD3-208ENST00000476237 MRC2Q9UBG0 1479 aa40.18■■■■■ 4.02
NMD3-208ENST00000476237 CCDC88BA6NC98 1476 aa40.17■■■■■ 4.02
NMD3-208ENST00000476237 FANCD2Q9BXW9 1451 aa40.16■■■■■ 4.02
NMD3-208ENST00000476237 CEP164Q9UPV0 1460 aa40.13■■■■■ 4.02
NMD3-208ENST00000476237 WDR62O43379 1518 aa40.05■■■■■ 4
NMD3-208ENST00000476237 DNAJC5Q9H3Z4 198 aa40.04■■■■■ 4
NMD3-208ENST00000476237 PRDM2Q13029 1718 aa39.84■■■■□ 3.97
NMD3-208ENST00000476237 URB2Q14146 1524 aaKnown RBP39.79■■■■□ 3.96
NMD3-208ENST00000476237 SUPT5HO00267 1087 aaKnown RBP39.59■■■■□ 3.93
NMD3-208ENST00000476237 TOPBP1Q92547 1522 aa39.46■■■■□ 3.91
NMD3-208ENST00000476237 ABCC8Q09428 1581 aa39.43■■■■□ 3.9
NMD3-208ENST00000476237 DNMBPQ6XZF7 1577 aa39.36■■■■□ 3.89
NMD3-208ENST00000476237 IFT140Q96RY7 1462 aa39.33■■■■□ 3.89
NMD3-208ENST00000476237 ZNF608Q9ULD9 1512 aaPredicted RBP39.2■■■■□ 3.87
NMD3-208ENST00000476237 POLA1P09884 1462 aaPredicted RBP39.11■■■■□ 3.85
NMD3-208ENST00000476237 TARBP1Q13395 1621 aaKnown RBP39.05■■■■□ 3.84
NMD3-208ENST00000476237 CUX1P39880 1505 aa39.01■■■■□ 3.84
NMD3-208ENST00000476237 OSCARQ8IYS5 282 aa39■■■■□ 3.83
NMD3-208ENST00000476237 EIF4G3O43432 1585 aaKnown RBP38.97■■■■□ 3.83
NMD3-208ENST00000476237 RAD54L2Q9Y4B4 1467 aa38.96■■■■□ 3.83
NMD3-208ENST00000476237 SOGA1O94964 1423 aa38.96■■■■□ 3.83
NMD3-208ENST00000476237 AQRO60306 1485 aaKnown RBP eCLIP38.94■■■■□ 3.82
NMD3-208ENST00000476237 FGD5Q6ZNL6 1462 aa38.94■■■■□ 3.82
NMD3-208ENST00000476237 TDRD9Q8NDG6 1382 aaKnown RBP38.8■■■■□ 3.8
NMD3-208ENST00000476237 WDR97A6NE52 1622 aa38.7■■■■□ 3.79
NMD3-208ENST00000476237 WRNQ14191 1432 aaPredicted RBP eCLIP38.6■■■■□ 3.77
NMD3-208ENST00000476237 FBLN2P98095 1184 aa38.56■■■■□ 3.76
NMD3-208ENST00000476237 ABCA10Q8WWZ4 1543 aa38.55■■■■□ 3.76
NMD3-208ENST00000476237 GRIN2BQ13224 1484 aa38.54■■■■□ 3.76
NMD3-208ENST00000476237 SNAPC4Q5SXM2 1469 aa38.54■■■■□ 3.76
NMD3-208ENST00000476237 TOP2BQ02880 1626 aa38.53■■■■□ 3.76
NMD3-208ENST00000476237 CHD1O14646 1710 aa38.53■■■■□ 3.76
NMD3-208ENST00000476237 TRIM41Q8WV44 630 aa38.51■■■■□ 3.76
NMD3-208ENST00000476237 BIVM-ERCC5R4GMW8 1640 aa38.51■■■■□ 3.76
NMD3-208ENST00000476237 SYNJ1O43426 1573 aa38.5■■■■□ 3.75
NMD3-208ENST00000476237 GAPVD1Q14C86 1478 aa38.48■■■■□ 3.75
NMD3-208ENST00000476237 MAGI1Q96QZ7 1491 aaPredicted RBP38.47■■■■□ 3.75
NMD3-208ENST00000476237 ABCA5Q8WWZ7 1642 aa38.4■■■■□ 3.74
NMD3-208ENST00000476237 CHMP7Q8WUX9 453 aaPredicted RBP38.39■■■■□ 3.74
NMD3-208ENST00000476237 RIMBP3CA6NJZ7 1639 aa38.35■■■■□ 3.73
NMD3-208ENST00000476237 RIMBP3BA6NNM3 1639 aa38.35■■■■□ 3.73
NMD3-208ENST00000476237 RIMBP3Q9UFD9 1639 aa38.35■■■■□ 3.73
NMD3-208ENST00000476237 PBRM1Q86U86 1689 aa38.35■■■■□ 3.73
NMD3-208ENST00000476237 SYNJ2O15056 1496 aa38.34■■■■□ 3.73
NMD3-208ENST00000476237 ARHGEF11O15085 1522 aa38.32■■■■□ 3.72
NMD3-208ENST00000476237 CLASP1Q7Z460 1538 aa38.17■■■■□ 3.7
NMD3-208ENST00000476237 ERICH3Q5RHP9 1530 aa38.07■■■■□ 3.68
NMD3-208ENST00000476237 ADAMTS12P58397 1594 aa38.06■■■■□ 3.68
NMD3-208ENST00000476237 CYB5RLQ6IPT4 315 aa38.04■■■■□ 3.68
NMD3-208ENST00000476237 FHAD1B1AJZ9 1412 aa38.03■■■■□ 3.68
NMD3-208ENST00000476237 GRIN2AQ12879 1464 aa38.03■■■■□ 3.68
NMD3-208ENST00000476237 ARAP1Q96P48 1450 aa37.99■■■■□ 3.67
NMD3-208ENST00000476237 NUP160Q12769 1436 aa37.9■■■■□ 3.66
NMD3-208ENST00000476237 CEP170Q5SW79 1584 aa37.85■■■■□ 3.65
NMD3-208ENST00000476237 KIF27Q86VH2 1401 aa37.83■■■■□ 3.65
NMD3-208ENST00000476237 IGF1RP08069 1367 aa37.78■■■■□ 3.64
NMD3-208ENST00000476237 ERCC6L2Q5T890 1561 aa37.62■■■■□ 3.61
NMD3-208ENST00000476237 SHROOM2Q13796 1616 aa37.61■■■■□ 3.61
NMD3-208ENST00000476237 CUL7Q14999 1698 aa37.6■■■■□ 3.61
NMD3-208ENST00000476237 JPH4Q96JJ6 628 aa37.55■■■■□ 3.6
NMD3-208ENST00000476237 CARMIL1Q5VZK9 1371 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms