RNA–Protein interactions for RNA: ENST00000476209.3

RN7SL60P-201, Transcript of RNA, 7SL, cytoplasmic 60, pseudogene, humanhuman

BASIC

Gene RN7SL60P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL60P-201ENST00000476209 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
RN7SL60P-201ENST00000476209 CCDC180Q9P1Z9 1646 aa25.32■■□□□ 1.64
RN7SL60P-201ENST00000476209 ABCC9O60706 1549 aa24.72■■□□□ 1.55
RN7SL60P-201ENST00000476209 NACADO15069 1562 aa23.83■■□□□ 1.41
RN7SL60P-201ENST00000476209 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
RN7SL60P-201ENST00000476209 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
RN7SL60P-201ENST00000476209 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
RN7SL60P-201ENST00000476209 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
RN7SL60P-201ENST00000476209 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
RN7SL60P-201ENST00000476209 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
RN7SL60P-201ENST00000476209 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.3
RN7SL60P-201ENST00000476209 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
RN7SL60P-201ENST00000476209 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
RN7SL60P-201ENST00000476209 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
RN7SL60P-201ENST00000476209 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
RN7SL60P-201ENST00000476209 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
RN7SL60P-201ENST00000476209 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
RN7SL60P-201ENST00000476209 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
RN7SL60P-201ENST00000476209 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
RN7SL60P-201ENST00000476209 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
RN7SL60P-201ENST00000476209 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
RN7SL60P-201ENST00000476209 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
RN7SL60P-201ENST00000476209 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
RN7SL60P-201ENST00000476209 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
RN7SL60P-201ENST00000476209 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
RN7SL60P-201ENST00000476209 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
RN7SL60P-201ENST00000476209 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
RN7SL60P-201ENST00000476209 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
RN7SL60P-201ENST00000476209 WIZO95785 1651 aa21.6■■□□□ 1.05
RN7SL60P-201ENST00000476209 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
RN7SL60P-201ENST00000476209 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
RN7SL60P-201ENST00000476209 NESP48681 1621 aa21.39■■□□□ 1.01
RN7SL60P-201ENST00000476209 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
RN7SL60P-201ENST00000476209 ERCC6Q03468 1493 aa21.3■■□□□ 1
RN7SL60P-201ENST00000476209 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
RN7SL60P-201ENST00000476209 CUX2O14529 1486 aa21.21■□□□□ 0.99
RN7SL60P-201ENST00000476209 CFTRP13569 1480 aa21.2■□□□□ 0.98
RN7SL60P-201ENST00000476209 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
RN7SL60P-201ENST00000476209 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
RN7SL60P-201ENST00000476209 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.97
RN7SL60P-201ENST00000476209 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
RN7SL60P-201ENST00000476209 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
RN7SL60P-201ENST00000476209 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
RN7SL60P-201ENST00000476209 PRDM2Q13029 1718 aa21■□□□□ 0.95
RN7SL60P-201ENST00000476209 WDR62O43379 1518 aa20.99■□□□□ 0.95
RN7SL60P-201ENST00000476209 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
RN7SL60P-201ENST00000476209 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
RN7SL60P-201ENST00000476209 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
RN7SL60P-201ENST00000476209 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
RN7SL60P-201ENST00000476209 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
RN7SL60P-201ENST00000476209 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
RN7SL60P-201ENST00000476209 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
RN7SL60P-201ENST00000476209 POLA1P09884 1462 aaPredicted RBP20.53■□□□□ 0.88
RN7SL60P-201ENST00000476209 CUX1P39880 1505 aa20.53■□□□□ 0.88
RN7SL60P-201ENST00000476209 TARBP1Q13395 1621 aaKnown RBP20.51■□□□□ 0.87
RN7SL60P-201ENST00000476209 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
RN7SL60P-201ENST00000476209 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
RN7SL60P-201ENST00000476209 SOGA1O94964 1423 aa20.42■□□□□ 0.86
RN7SL60P-201ENST00000476209 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
RN7SL60P-201ENST00000476209 WDR97A6NE52 1622 aa20.39■□□□□ 0.86
RN7SL60P-201ENST00000476209 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
RN7SL60P-201ENST00000476209 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
RN7SL60P-201ENST00000476209 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
RN7SL60P-201ENST00000476209 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.85
RN7SL60P-201ENST00000476209 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
RN7SL60P-201ENST00000476209 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
RN7SL60P-201ENST00000476209 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
RN7SL60P-201ENST00000476209 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
RN7SL60P-201ENST00000476209 OSCARQ8IYS5 282 aa20.26■□□□□ 0.83
RN7SL60P-201ENST00000476209 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
RN7SL60P-201ENST00000476209 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
RN7SL60P-201ENST00000476209 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
RN7SL60P-201ENST00000476209 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
RN7SL60P-201ENST00000476209 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
RN7SL60P-201ENST00000476209 CHD1O14646 1710 aa20.13■□□□□ 0.81
RN7SL60P-201ENST00000476209 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
RN7SL60P-201ENST00000476209 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
RN7SL60P-201ENST00000476209 ERICH3Q5RHP9 1530 aa20.05■□□□□ 0.8
RN7SL60P-201ENST00000476209 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
RN7SL60P-201ENST00000476209 FBLN2P98095 1184 aa20.01■□□□□ 0.79
RN7SL60P-201ENST00000476209 ADAMTS12P58397 1594 aa20■□□□□ 0.79
RN7SL60P-201ENST00000476209 CLASP1Q7Z460 1538 aa19.99■□□□□ 0.79
RN7SL60P-201ENST00000476209 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
RN7SL60P-201ENST00000476209 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
RN7SL60P-201ENST00000476209 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
RN7SL60P-201ENST00000476209 KIF27Q86VH2 1401 aa19.94■□□□□ 0.78
RN7SL60P-201ENST00000476209 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
RN7SL60P-201ENST00000476209 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
RN7SL60P-201ENST00000476209 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
RN7SL60P-201ENST00000476209 NUP160Q12769 1436 aa19.92■□□□□ 0.78
RN7SL60P-201ENST00000476209 IGF1RP08069 1367 aa19.89■□□□□ 0.77
RN7SL60P-201ENST00000476209 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
RN7SL60P-201ENST00000476209 CUL7Q14999 1698 aa19.82■□□□□ 0.76
RN7SL60P-201ENST00000476209 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
RN7SL60P-201ENST00000476209 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
RN7SL60P-201ENST00000476209 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
RN7SL60P-201ENST00000476209 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
RN7SL60P-201ENST00000476209 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
RN7SL60P-201ENST00000476209 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
RN7SL60P-201ENST00000476209 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms