RNA–Protein interactions for RNA: ENST00000476109.5

SUPT20H-213, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 769 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-213ENST00000476109 NISCHQ9Y2I1 1504 aa49.45■■■■■ 5.51
SUPT20H-213ENST00000476109 ABCC9O60706 1549 aa44.4■■■■■ 4.7
SUPT20H-213ENST00000476109 CCDC180Q9P1Z9 1646 aa44.35■■■■■ 4.69
SUPT20H-213ENST00000476109 RB1CC1Q8TDY2 1594 aa42.16■■■■■ 4.34
SUPT20H-213ENST00000476109 NACADO15069 1562 aa41.87■■■■■ 4.29
SUPT20H-213ENST00000476109 DCAF8L2P0C7V8 631 aa41.67■■■■■ 4.26
SUPT20H-213ENST00000476109 DNAJC5BQ9UF47 199 aa41.67■■■■■ 4.26
SUPT20H-213ENST00000476109 UNC13AQ9UPW8 1703 aa41.41■■■■■ 4.22
SUPT20H-213ENST00000476109 PABPN1Q86U42 306 aaKnown RBP eCLIP41.33■■■■■ 4.21
SUPT20H-213ENST00000476109 MYO15BQ96JP2 1530 aa41.25■■■■■ 4.19
SUPT20H-213ENST00000476109 BICRAQ9NZM4 1560 aa41.08■■■■■ 4.17
SUPT20H-213ENST00000476109 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
SUPT20H-213ENST00000476109 DCAF1Q9Y4B6 1507 aa40.77■■■■■ 4.12
SUPT20H-213ENST00000476109 SCRIBQ14160 1630 aa40.53■■■■■ 4.08
SUPT20H-213ENST00000476109 SHROOM4Q9ULL8 1493 aa40.3■■■■■ 4.04
SUPT20H-213ENST00000476109 CC2D2AQ9P2K1 1620 aa40.1■■■■■ 4.01
SUPT20H-213ENST00000476109 EIF4G1Q04637 1599 aaKnown RBP40.01■■■■□ 3.99
SUPT20H-213ENST00000476109 CECR2Q9BXF3 1484 aa39.94■■■■□ 3.98
SUPT20H-213ENST00000476109 NCAPD3P42695 1498 aa38.66■■■■□ 3.78
SUPT20H-213ENST00000476109 SMARCA4P51532 1647 aa38.61■■■■□ 3.77
SUPT20H-213ENST00000476109 ATAD2BQ9ULI0 1458 aa38.6■■■■□ 3.77
SUPT20H-213ENST00000476109 SMARCA2P51531 1590 aa38.44■■■■□ 3.74
SUPT20H-213ENST00000476109 HMGXB3Q12766 1538 aa38.41■■■■□ 3.74
SUPT20H-213ENST00000476109 BAZ1AQ9NRL2 1556 aaPredicted RBP38.34■■■■□ 3.73
SUPT20H-213ENST00000476109 ERCC6Q03468 1493 aa38.24■■■■□ 3.71
SUPT20H-213ENST00000476109 BAZ1BQ9UIG0 1483 aaKnown RBP38.22■■■■□ 3.71
SUPT20H-213ENST00000476109 NESP48681 1621 aa38.2■■■■□ 3.71
SUPT20H-213ENST00000476109 PEG3Q9GZU2 1588 aa38.19■■■■□ 3.7
SUPT20H-213ENST00000476109 MROH2BQ7Z745 1585 aa38.18■■■■□ 3.7
SUPT20H-213ENST00000476109 CUX2O14529 1486 aa38.13■■■■□ 3.69
SUPT20H-213ENST00000476109 DNAJC5Q9H3Z4 198 aa38.08■■■■□ 3.69
SUPT20H-213ENST00000476109 THOC2Q8NI27 1593 aaKnown RBP37.79■■■■□ 3.64
SUPT20H-213ENST00000476109 LAMC3Q9Y6N6 1575 aa37.79■■■■□ 3.64
SUPT20H-213ENST00000476109 WIZO95785 1651 aa37.75■■■■□ 3.63
SUPT20H-213ENST00000476109 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
SUPT20H-213ENST00000476109 PDS5BQ9NTI5 1447 aa37.51■■■■□ 3.59
SUPT20H-213ENST00000476109 CADPSQ9ULU8 1353 aa37.48■■■■□ 3.59
SUPT20H-213ENST00000476109 RSF1Q96T23 1441 aaPredicted RBP37.35■■■■□ 3.57
SUPT20H-213ENST00000476109 MRC2Q9UBG0 1479 aa37.28■■■■□ 3.56
SUPT20H-213ENST00000476109 WDR62O43379 1518 aa37.21■■■■□ 3.55
SUPT20H-213ENST00000476109 TOP2AP11388 1531 aaKnown RBP37.2■■■■□ 3.55
SUPT20H-213ENST00000476109 CEP164Q9UPV0 1460 aa37.13■■■■□ 3.53
SUPT20H-213ENST00000476109 FANCD2Q9BXW9 1451 aa37.11■■■■□ 3.53
SUPT20H-213ENST00000476109 CFTRP13569 1480 aa37.09■■■■□ 3.53
SUPT20H-213ENST00000476109 URB2Q14146 1524 aaKnown RBP36.87■■■■□ 3.49
SUPT20H-213ENST00000476109 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
SUPT20H-213ENST00000476109 CCDC88BA6NC98 1476 aa36.78■■■■□ 3.48
SUPT20H-213ENST00000476109 TRIM41Q8WV44 630 aa36.49■■■■□ 3.43
SUPT20H-213ENST00000476109 TOPBP1Q92547 1522 aa36.44■■■■□ 3.42
SUPT20H-213ENST00000476109 ZNF608Q9ULD9 1512 aaPredicted RBP36.44■■■■□ 3.42
SUPT20H-213ENST00000476109 IFT140Q96RY7 1462 aa36.36■■■■□ 3.41
SUPT20H-213ENST00000476109 OSCARQ8IYS5 282 aa36.33■■■■□ 3.41
SUPT20H-213ENST00000476109 DNMBPQ6XZF7 1577 aa36.28■■■■□ 3.4
SUPT20H-213ENST00000476109 EIF4G3O43432 1585 aaKnown RBP36.22■■■■□ 3.39
SUPT20H-213ENST00000476109 ABCC8Q09428 1581 aa36.19■■■■□ 3.38
SUPT20H-213ENST00000476109 TARBP1Q13395 1621 aaKnown RBP36.15■■■■□ 3.38
SUPT20H-213ENST00000476109 POLA1P09884 1462 aaPredicted RBP36.07■■■■□ 3.37
SUPT20H-213ENST00000476109 AQRO60306 1485 aaKnown RBP eCLIP36.05■■■■□ 3.368e-6■■■■□ 23.2
SUPT20H-213ENST00000476109 RIMBP3CA6NJZ7 1639 aa36.05■■■■□ 3.36
SUPT20H-213ENST00000476109 RIMBP3BA6NNM3 1639 aa36.05■■■■□ 3.36
SUPT20H-213ENST00000476109 RIMBP3Q9UFD9 1639 aa36.05■■■■□ 3.36
SUPT20H-213ENST00000476109 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
SUPT20H-213ENST00000476109 CHD1O14646 1710 aa35.97■■■■□ 3.35
SUPT20H-213ENST00000476109 ARHGEF11O15085 1522 aa35.9■■■■□ 3.34
SUPT20H-213ENST00000476109 CUX1P39880 1505 aa35.87■■■■□ 3.33
SUPT20H-213ENST00000476109 FGD5Q6ZNL6 1462 aa35.86■■■■□ 3.33
SUPT20H-213ENST00000476109 SOGA1O94964 1423 aa35.83■■■■□ 3.33
SUPT20H-213ENST00000476109 TDRD9Q8NDG6 1382 aaKnown RBP35.82■■■■□ 3.32
SUPT20H-213ENST00000476109 FBLN2P98095 1184 aa35.72■■■■□ 3.31
SUPT20H-213ENST00000476109 SNAPC4Q5SXM2 1469 aa35.69■■■■□ 3.3
SUPT20H-213ENST00000476109 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
SUPT20H-213ENST00000476109 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
SUPT20H-213ENST00000476109 ARAP1Q96P48 1450 aa35.59■■■■□ 3.29
SUPT20H-213ENST00000476109 CYB5RLQ6IPT4 315 aa35.56■■■■□ 3.28
SUPT20H-213ENST00000476109 GRIN2BQ13224 1484 aa35.52■■■■□ 3.28
SUPT20H-213ENST00000476109 CLASP1Q7Z460 1538 aa35.52■■■■□ 3.28
SUPT20H-213ENST00000476109 MAGI1Q96QZ7 1491 aaPredicted RBP35.51■■■■□ 3.28
SUPT20H-213ENST00000476109 PBRM1Q86U86 1689 aa35.5■■■■□ 3.27
SUPT20H-213ENST00000476109 CHMP7Q8WUX9 453 aaPredicted RBP35.42■■■■□ 3.26
SUPT20H-213ENST00000476109 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
SUPT20H-213ENST00000476109 SYNJ2O15056 1496 aa35.41■■■■□ 3.26
SUPT20H-213ENST00000476109 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
SUPT20H-213ENST00000476109 ABCA10Q8WWZ4 1543 aa35.41■■■■□ 3.26
SUPT20H-213ENST00000476109 SYNJ1O43426 1573 aa35.4■■■■□ 3.26
SUPT20H-213ENST00000476109 BIVM-ERCC5R4GMW8 1640 aa35.27■■■■□ 3.24
SUPT20H-213ENST00000476109 TOP2BQ02880 1626 aa35.24■■■■□ 3.23
SUPT20H-213ENST00000476109 WRNQ14191 1432 aaPredicted RBP eCLIP35.21■■■■□ 3.23
SUPT20H-213ENST00000476109 ADAMTS12P58397 1594 aa35.16■■■■□ 3.22
SUPT20H-213ENST00000476109 TRHP20396 242 aaPredicted RBP35.12■■■■□ 3.21
SUPT20H-213ENST00000476109 GRIN2AQ12879 1464 aa35.1■■■■□ 3.21
SUPT20H-213ENST00000476109 ERCC6L2Q5T890 1561 aa35.07■■■■□ 3.2
SUPT20H-213ENST00000476109 CEP170Q5SW79 1584 aa35.06■■■■□ 3.2
SUPT20H-213ENST00000476109 NUP160Q12769 1436 aa34.98■■■■□ 3.19
SUPT20H-213ENST00000476109 FHAD1B1AJZ9 1412 aa34.95■■■■□ 3.19
SUPT20H-213ENST00000476109 ERICH3Q5RHP9 1530 aa34.93■■■■□ 3.18
SUPT20H-213ENST00000476109 SHROOM2Q13796 1616 aa34.87■■■■□ 3.17
SUPT20H-213ENST00000476109 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
SUPT20H-213ENST00000476109 PRG4Q92954 1404 aaPredicted RBP34.64■■■■□ 3.14
SUPT20H-213ENST00000476109 JPH4Q96JJ6 628 aa34.55■■■■□ 3.12
SUPT20H-213ENST00000476109 IGF1RP08069 1367 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms