RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.21
SLC48A1-204ENST00000476104 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
SLC48A1-204ENST00000476104 ABCC9O60706 1549 aa31.25■■■□□ 2.59
SLC48A1-204ENST00000476104 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
SLC48A1-204ENST00000476104 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
SLC48A1-204ENST00000476104 NACADO15069 1562 aa29.65■■■□□ 2.34
SLC48A1-204ENST00000476104 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
SLC48A1-204ENST00000476104 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
SLC48A1-204ENST00000476104 DNAJC5BQ9UF47 199 aa29.13■■■□□ 2.25
SLC48A1-204ENST00000476104 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
SLC48A1-204ENST00000476104 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
SLC48A1-204ENST00000476104 DCAF1Q9Y4B6 1507 aa28.97■■■□□ 2.23
SLC48A1-204ENST00000476104 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
SLC48A1-204ENST00000476104 SCRIBQ14160 1630 aa28.62■■■□□ 2.17
SLC48A1-204ENST00000476104 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
SLC48A1-204ENST00000476104 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
SLC48A1-204ENST00000476104 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.1
SLC48A1-204ENST00000476104 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
SLC48A1-204ENST00000476104 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
SLC48A1-204ENST00000476104 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
SLC48A1-204ENST00000476104 ATAD2BQ9ULI0 1458 aa27.31■■□□□ 1.96
SLC48A1-204ENST00000476104 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
SLC48A1-204ENST00000476104 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
SLC48A1-204ENST00000476104 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
SLC48A1-204ENST00000476104 BAZ1BQ9UIG0 1483 aaKnown RBP27.09■■□□□ 1.93
SLC48A1-204ENST00000476104 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
SLC48A1-204ENST00000476104 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
SLC48A1-204ENST00000476104 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
SLC48A1-204ENST00000476104 CUX2O14529 1486 aa26.87■■□□□ 1.89
SLC48A1-204ENST00000476104 NESP48681 1621 aa26.87■■□□□ 1.89
SLC48A1-204ENST00000476104 LAMC3Q9Y6N6 1575 aa26.73■■□□□ 1.87
SLC48A1-204ENST00000476104 WIZO95785 1651 aa26.7■■□□□ 1.86
SLC48A1-204ENST00000476104 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
SLC48A1-204ENST00000476104 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
SLC48A1-204ENST00000476104 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.84
SLC48A1-204ENST00000476104 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
SLC48A1-204ENST00000476104 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
SLC48A1-204ENST00000476104 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
SLC48A1-204ENST00000476104 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.82
SLC48A1-204ENST00000476104 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
SLC48A1-204ENST00000476104 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
SLC48A1-204ENST00000476104 CFTRP13569 1480 aa26.28■■□□□ 1.8
SLC48A1-204ENST00000476104 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
SLC48A1-204ENST00000476104 WDR62O43379 1518 aa26.24■■□□□ 1.79
SLC48A1-204ENST00000476104 CCDC88BA6NC98 1476 aa26.1■■□□□ 1.77
SLC48A1-204ENST00000476104 URB2Q14146 1524 aaKnown RBP26■■□□□ 1.75
SLC48A1-204ENST00000476104 PRDM2Q13029 1718 aa26■■□□□ 1.75
SLC48A1-204ENST00000476104 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
SLC48A1-204ENST00000476104 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
SLC48A1-204ENST00000476104 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
SLC48A1-204ENST00000476104 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
SLC48A1-204ENST00000476104 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
SLC48A1-204ENST00000476104 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
SLC48A1-204ENST00000476104 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
SLC48A1-204ENST00000476104 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
SLC48A1-204ENST00000476104 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
SLC48A1-204ENST00000476104 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
SLC48A1-204ENST00000476104 TARBP1Q13395 1621 aaKnown RBP25.49■■□□□ 1.67
SLC48A1-204ENST00000476104 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.67
SLC48A1-204ENST00000476104 SOGA1O94964 1423 aa25.45■■□□□ 1.66
SLC48A1-204ENST00000476104 RAD54L2Q9Y4B4 1467 aa25.43■■□□□ 1.66
SLC48A1-204ENST00000476104 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
SLC48A1-204ENST00000476104 CUX1P39880 1505 aa25.37■■□□□ 1.65
SLC48A1-204ENST00000476104 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
SLC48A1-204ENST00000476104 FBLN2P98095 1184 aa25.37■■□□□ 1.65
SLC48A1-204ENST00000476104 CHD1O14646 1710 aa25.29■■□□□ 1.64
SLC48A1-204ENST00000476104 RIMBP3CA6NJZ7 1639 aa25.29■■□□□ 1.64
SLC48A1-204ENST00000476104 RIMBP3BA6NNM3 1639 aa25.29■■□□□ 1.64
SLC48A1-204ENST00000476104 RIMBP3Q9UFD9 1639 aa25.29■■□□□ 1.64
SLC48A1-204ENST00000476104 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
SLC48A1-204ENST00000476104 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
SLC48A1-204ENST00000476104 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
SLC48A1-204ENST00000476104 CHMP7Q8WUX9 453 aaPredicted RBP25.2■■□□□ 1.62
SLC48A1-204ENST00000476104 GRIN2BQ13224 1484 aa25.2■■□□□ 1.62
SLC48A1-204ENST00000476104 MAGI1Q96QZ7 1491 aaPredicted RBP25.18■■□□□ 1.62
SLC48A1-204ENST00000476104 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
SLC48A1-204ENST00000476104 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
SLC48A1-204ENST00000476104 ABCA10Q8WWZ4 1543 aa25.11■■□□□ 1.61
SLC48A1-204ENST00000476104 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
SLC48A1-204ENST00000476104 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
SLC48A1-204ENST00000476104 SYNJ1O43426 1573 aa25.06■■□□□ 1.6
SLC48A1-204ENST00000476104 PBRM1Q86U86 1689 aa25.05■■□□□ 1.6
SLC48A1-204ENST00000476104 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
SLC48A1-204ENST00000476104 ABCA5Q8WWZ7 1642 aa25.02■■□□□ 1.6
SLC48A1-204ENST00000476104 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
SLC48A1-204ENST00000476104 BIVM-ERCC5R4GMW8 1640 aa25■■□□□ 1.59
SLC48A1-204ENST00000476104 ARAP1Q96P48 1450 aa24.99■■□□□ 1.59
SLC48A1-204ENST00000476104 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
SLC48A1-204ENST00000476104 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
SLC48A1-204ENST00000476104 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
SLC48A1-204ENST00000476104 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
SLC48A1-204ENST00000476104 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
SLC48A1-204ENST00000476104 NUP160Q12769 1436 aa24.75■■□□□ 1.55
SLC48A1-204ENST00000476104 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
SLC48A1-204ENST00000476104 ERCC6L2Q5T890 1561 aa24.62■■□□□ 1.53
SLC48A1-204ENST00000476104 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
SLC48A1-204ENST00000476104 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
SLC48A1-204ENST00000476104 JPH4Q96JJ6 628 aa24.56■■□□□ 1.52
SLC48A1-204ENST00000476104 PRG4Q92954 1404 aaPredicted RBP24.54■■□□□ 1.52
SLC48A1-204ENST00000476104 IGF1RP08069 1367 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms