RNA–Protein interactions for RNA: ENST00000476050.5

TRAF3IP3-211, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 2

Gene TRAF3IP3, Length 3,302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-211ENST00000476050 NISCHQ9Y2I1 1504 aa20.3■□□□□ 0.84
TRAF3IP3-211ENST00000476050 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.4
TRAF3IP3-211ENST00000476050 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
TRAF3IP3-211ENST00000476050 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
TRAF3IP3-211ENST00000476050 SHROOM4Q9ULL8 1493 aa17.03■□□□□ 0.32
TRAF3IP3-211ENST00000476050 ABCC9O60706 1549 aa16.68■□□□□ 0.26
TRAF3IP3-211ENST00000476050 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
TRAF3IP3-211ENST00000476050 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
TRAF3IP3-211ENST00000476050 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
TRAF3IP3-211ENST00000476050 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
TRAF3IP3-211ENST00000476050 NACADO15069 1562 aa16.32■□□□□ 0.2
TRAF3IP3-211ENST00000476050 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
TRAF3IP3-211ENST00000476050 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
TRAF3IP3-211ENST00000476050 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
TRAF3IP3-211ENST00000476050 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRAF3IP3-211ENST00000476050 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
TRAF3IP3-211ENST00000476050 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
TRAF3IP3-211ENST00000476050 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
TRAF3IP3-211ENST00000476050 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
TRAF3IP3-211ENST00000476050 WIZO95785 1651 aa15.7■□□□□ 0.1
TRAF3IP3-211ENST00000476050 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
TRAF3IP3-211ENST00000476050 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
TRAF3IP3-211ENST00000476050 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
TRAF3IP3-211ENST00000476050 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
TRAF3IP3-211ENST00000476050 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
TRAF3IP3-211ENST00000476050 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
TRAF3IP3-211ENST00000476050 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
TRAF3IP3-211ENST00000476050 ATAD2BQ9ULI0 1458 aa15.3■□□□□ 0.04
TRAF3IP3-211ENST00000476050 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
TRAF3IP3-211ENST00000476050 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
TRAF3IP3-211ENST00000476050 FAM9AQ8IZU1 332 aaPredicted RBP15.27■□□□□ 0.03
TRAF3IP3-211ENST00000476050 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
TRAF3IP3-211ENST00000476050 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
TRAF3IP3-211ENST00000476050 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
TRAF3IP3-211ENST00000476050 NCAPD3P42695 1498 aa15.08■□□□□ 0
TRAF3IP3-211ENST00000476050 HMGXB3Q12766 1538 aa15.07■□□□□ 0
TRAF3IP3-211ENST00000476050 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
TRAF3IP3-211ENST00000476050 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
TRAF3IP3-211ENST00000476050 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
TRAF3IP3-211ENST00000476050 SOGA1O94964 1423 aa14.9□□□□□ -0.02
TRAF3IP3-211ENST00000476050 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
TRAF3IP3-211ENST00000476050 CFTRP13569 1480 aa14.82□□□□□ -0.04
TRAF3IP3-211ENST00000476050 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
TRAF3IP3-211ENST00000476050 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
TRAF3IP3-211ENST00000476050 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
TRAF3IP3-211ENST00000476050 PCGF6Q9BYE7 350 aa14.77□□□□□ -0.04
TRAF3IP3-211ENST00000476050 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
TRAF3IP3-211ENST00000476050 TOP2BQ02880 1626 aa14.75□□□□□ -0.05
TRAF3IP3-211ENST00000476050 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
TRAF3IP3-211ENST00000476050 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
TRAF3IP3-211ENST00000476050 CUX1P39880 1505 aa14.73□□□□□ -0.05
TRAF3IP3-211ENST00000476050 NESP48681 1621 aa14.72□□□□□ -0.05
TRAF3IP3-211ENST00000476050 EEA1Q15075 1411 aa14.69□□□□□ -0.06
TRAF3IP3-211ENST00000476050 PPARGC1BQ86YN6 1023 aaKnown RBP14.68□□□□□ -0.06
TRAF3IP3-211ENST00000476050 RANGAP1P46060 587 aaPredicted RBP14.64□□□□□ -0.07
TRAF3IP3-211ENST00000476050 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
TRAF3IP3-211ENST00000476050 GOLGA3Q08378 1498 aa14.59□□□□□ -0.07
TRAF3IP3-211ENST00000476050 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
TRAF3IP3-211ENST00000476050 TNIKQ9UKE5 1360 aa14.57□□□□□ -0.08
TRAF3IP3-211ENST00000476050 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
TRAF3IP3-211ENST00000476050 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
TRAF3IP3-211ENST00000476050 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
TRAF3IP3-211ENST00000476050 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
TRAF3IP3-211ENST00000476050 RAPGEF2Q9Y4G8 1499 aa14.55□□□□□ -0.08
TRAF3IP3-211ENST00000476050 KIF21AQ7Z4S6 1674 aa14.53□□□□□ -0.08
TRAF3IP3-211ENST00000476050 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
TRAF3IP3-211ENST00000476050 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
TRAF3IP3-211ENST00000476050 KIF21BO75037 1637 aa14.52□□□□□ -0.09
TRAF3IP3-211ENST00000476050 CUX2O14529 1486 aa14.5□□□□□ -0.09
TRAF3IP3-211ENST00000476050 DNMBPQ6XZF7 1577 aa14.48□□□□□ -0.09
TRAF3IP3-211ENST00000476050 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
TRAF3IP3-211ENST00000476050 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
TRAF3IP3-211ENST00000476050 RAD54L2Q9Y4B4 1467 aa14.46□□□□□ -0.09
TRAF3IP3-211ENST00000476050 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
TRAF3IP3-211ENST00000476050 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
TRAF3IP3-211ENST00000476050 CLIP1P30622 1438 aa14.43□□□□□ -0.1
TRAF3IP3-211ENST00000476050 PRXQ9BXM0 1461 aa14.43□□□□□ -0.1
TRAF3IP3-211ENST00000476050 IGF1RP08069 1367 aa14.4□□□□□ -0.1
TRAF3IP3-211ENST00000476050 HRCP23327 699 aa14.36□□□□□ -0.11
TRAF3IP3-211ENST00000476050 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
TRAF3IP3-211ENST00000476050 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
TRAF3IP3-211ENST00000476050 CARMIL1Q5VZK9 1371 aa14.35□□□□□ -0.11
TRAF3IP3-211ENST00000476050 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
TRAF3IP3-211ENST00000476050 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
TRAF3IP3-211ENST00000476050 APLP2Q06481 763 aa14.28□□□□□ -0.12
TRAF3IP3-211ENST00000476050 VPS8Q8N3P4 1428 aa14.28□□□□□ -0.12
TRAF3IP3-211ENST00000476050 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.12
TRAF3IP3-211ENST00000476050 MRC2Q9UBG0 1479 aa14.27□□□□□ -0.13
TRAF3IP3-211ENST00000476050 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
TRAF3IP3-211ENST00000476050 P3H3Q8IVL6 736 aa14.25□□□□□ -0.13
TRAF3IP3-211ENST00000476050 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
TRAF3IP3-211ENST00000476050 ARAP1Q96P48 1450 aa14.23□□□□□ -0.13
TRAF3IP3-211ENST00000476050 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
TRAF3IP3-211ENST00000476050 WDR62O43379 1518 aa14.2□□□□□ -0.14
TRAF3IP3-211ENST00000476050 ARHGAP35Q9NRY4 1499 aa14.2□□□□□ -0.14
TRAF3IP3-211ENST00000476050 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAF3IP3-211ENST00000476050 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
TRAF3IP3-211ENST00000476050 CUL7Q14999 1698 aa14.19□□□□□ -0.14
TRAF3IP3-211ENST00000476050 PBRM1Q86U86 1689 aa14.17□□□□□ -0.14
TRAF3IP3-211ENST00000476050 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms