RNA–Protein interactions for RNA: ENST00000476041.1

LSM10-202, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-202ENST00000476041 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
LSM10-202ENST00000476041 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
LSM10-202ENST00000476041 ABCC9O60706 1549 aa31.22■■■□□ 2.59
LSM10-202ENST00000476041 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
LSM10-202ENST00000476041 RB1CC1Q8TDY2 1594 aa29.84■■■□□ 2.37
LSM10-202ENST00000476041 NACADO15069 1562 aa29.69■■■□□ 2.34
LSM10-202ENST00000476041 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
LSM10-202ENST00000476041 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
LSM10-202ENST00000476041 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
LSM10-202ENST00000476041 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
LSM10-202ENST00000476041 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
LSM10-202ENST00000476041 DCAF1Q9Y4B6 1507 aa29.06■■■□□ 2.24
LSM10-202ENST00000476041 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
LSM10-202ENST00000476041 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.17
LSM10-202ENST00000476041 SCRIBQ14160 1630 aa28.63■■■□□ 2.17
LSM10-202ENST00000476041 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
LSM10-202ENST00000476041 CC2D2AQ9P2K1 1620 aa28.24■■■□□ 2.11
LSM10-202ENST00000476041 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
LSM10-202ENST00000476041 CECR2Q9BXF3 1484 aa28.12■■■□□ 2.09
LSM10-202ENST00000476041 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
LSM10-202ENST00000476041 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
LSM10-202ENST00000476041 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
LSM10-202ENST00000476041 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
LSM10-202ENST00000476041 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
LSM10-202ENST00000476041 HMGXB3Q12766 1538 aa27.23■■□□□ 1.95
LSM10-202ENST00000476041 CUX2O14529 1486 aa27.13■■□□□ 1.93
LSM10-202ENST00000476041 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
LSM10-202ENST00000476041 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
LSM10-202ENST00000476041 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
LSM10-202ENST00000476041 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
LSM10-202ENST00000476041 NESP48681 1621 aa26.87■■□□□ 1.89
LSM10-202ENST00000476041 LAMC3Q9Y6N6 1575 aa26.76■■□□□ 1.87
LSM10-202ENST00000476041 WIZO95785 1651 aa26.73■■□□□ 1.87
LSM10-202ENST00000476041 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
LSM10-202ENST00000476041 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
LSM10-202ENST00000476041 PDS5BQ9NTI5 1447 aa26.58■■□□□ 1.85
LSM10-202ENST00000476041 CADPSQ9ULU8 1353 aa26.57■■□□□ 1.84
LSM10-202ENST00000476041 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
LSM10-202ENST00000476041 KIF21AQ7Z4S6 1674 aa26.56■■□□□ 1.84
LSM10-202ENST00000476041 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
LSM10-202ENST00000476041 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
LSM10-202ENST00000476041 CFTRP13569 1480 aa26.31■■□□□ 1.8
LSM10-202ENST00000476041 WDR62O43379 1518 aa26.29■■□□□ 1.8
LSM10-202ENST00000476041 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
LSM10-202ENST00000476041 FANCD2Q9BXW9 1451 aa26.26■■□□□ 1.79
LSM10-202ENST00000476041 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
LSM10-202ENST00000476041 PRDM2Q13029 1718 aa26.08■■□□□ 1.77
LSM10-202ENST00000476041 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
LSM10-202ENST00000476041 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
LSM10-202ENST00000476041 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
LSM10-202ENST00000476041 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
LSM10-202ENST00000476041 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
LSM10-202ENST00000476041 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
LSM10-202ENST00000476041 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
LSM10-202ENST00000476041 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
LSM10-202ENST00000476041 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
LSM10-202ENST00000476041 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
LSM10-202ENST00000476041 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
LSM10-202ENST00000476041 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
LSM10-202ENST00000476041 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
LSM10-202ENST00000476041 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
LSM10-202ENST00000476041 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.674e-8■■■■□ 22.5
LSM10-202ENST00000476041 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
LSM10-202ENST00000476041 SOGA1O94964 1423 aa25.41■■□□□ 1.66
LSM10-202ENST00000476041 CUX1P39880 1505 aa25.41■■□□□ 1.66
LSM10-202ENST00000476041 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
LSM10-202ENST00000476041 ARHGEF11O15085 1522 aa25.35■■□□□ 1.65
LSM10-202ENST00000476041 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
LSM10-202ENST00000476041 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
LSM10-202ENST00000476041 CHD1O14646 1710 aa25.32■■□□□ 1.64
LSM10-202ENST00000476041 AEBP2Q6ZN18 517 aaPredicted RBP25.32■■□□□ 1.64
LSM10-202ENST00000476041 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
LSM10-202ENST00000476041 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
LSM10-202ENST00000476041 FBLN2P98095 1184 aa25.21■■□□□ 1.63
LSM10-202ENST00000476041 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
LSM10-202ENST00000476041 MAGI1Q96QZ7 1491 aaPredicted RBP25.18■■□□□ 1.62
LSM10-202ENST00000476041 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
LSM10-202ENST00000476041 CYB5RLQ6IPT4 315 aa25.14■■□□□ 1.62
LSM10-202ENST00000476041 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
LSM10-202ENST00000476041 PBRM1Q86U86 1689 aa25.1■■□□□ 1.61
LSM10-202ENST00000476041 ABCA5Q8WWZ7 1642 aa25.09■■□□□ 1.61
LSM10-202ENST00000476041 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
LSM10-202ENST00000476041 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
LSM10-202ENST00000476041 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.6
LSM10-202ENST00000476041 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
LSM10-202ENST00000476041 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
LSM10-202ENST00000476041 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
LSM10-202ENST00000476041 SYNJ1O43426 1573 aa25.05■■□□□ 1.6
LSM10-202ENST00000476041 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
LSM10-202ENST00000476041 ADAMTS12P58397 1594 aa24.88■■□□□ 1.57
LSM10-202ENST00000476041 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
LSM10-202ENST00000476041 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
LSM10-202ENST00000476041 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
LSM10-202ENST00000476041 NUP160Q12769 1436 aa24.78■■□□□ 1.56
LSM10-202ENST00000476041 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
LSM10-202ENST00000476041 SHROOM2Q13796 1616 aa24.67■■□□□ 1.54
LSM10-202ENST00000476041 ERCC6L2Q5T890 1561 aa24.66■■□□□ 1.54
LSM10-202ENST00000476041 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
LSM10-202ENST00000476041 IGF1RP08069 1367 aa24.54■■□□□ 1.52
LSM10-202ENST00000476041 RUSC2Q8N2Y8 1516 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms