RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 NISCHQ9Y2I1 1504 aa46.89■■■■■ 5.1
PDE6B-209ENST00000476034 CCDC180Q9P1Z9 1646 aa41.79■■■■■ 4.28
PDE6B-209ENST00000476034 ABCC9O60706 1549 aa40.75■■■■■ 4.11
PDE6B-209ENST00000476034 RB1CC1Q8TDY2 1594 aa39.29■■■■□ 3.88
PDE6B-209ENST00000476034 NACADO15069 1562 aa39.23■■■■□ 3.87
PDE6B-209ENST00000476034 ZCCHC6Q5VYS8 1495 aaKnown RBP39.08■■■■□ 3.85
PDE6B-209ENST00000476034 DCAF8L2P0C7V8 631 aa39.05■■■■□ 3.84
PDE6B-209ENST00000476034 MYO15BQ96JP2 1530 aa39.01■■■■□ 3.84
PDE6B-209ENST00000476034 DCAF1Q9Y4B6 1507 aa38.84■■■■□ 3.81
PDE6B-209ENST00000476034 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
PDE6B-209ENST00000476034 BICRAQ9NZM4 1560 aa38.07■■■■□ 3.69
PDE6B-209ENST00000476034 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
PDE6B-209ENST00000476034 PABPN1Q86U42 306 aaKnown RBP eCLIP38.01■■■■□ 3.68
PDE6B-209ENST00000476034 SHROOM4Q9ULL8 1493 aa37.73■■■■□ 3.63
PDE6B-209ENST00000476034 DNAJC5BQ9UF47 199 aa37.31■■■■□ 3.56
PDE6B-209ENST00000476034 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
PDE6B-209ENST00000476034 CC2D2AQ9P2K1 1620 aa36.92■■■■□ 3.5
PDE6B-209ENST00000476034 CECR2Q9BXF3 1484 aa36.63■■■■□ 3.45
PDE6B-209ENST00000476034 SMARCA4P51532 1647 aa36.42■■■■□ 3.42
PDE6B-209ENST00000476034 BAZ1AQ9NRL2 1556 aaPredicted RBP36.38■■■■□ 3.41
PDE6B-209ENST00000476034 SMARCA2P51531 1590 aa36.18■■■■□ 3.38
PDE6B-209ENST00000476034 ATAD2BQ9ULI0 1458 aa36.17■■■■□ 3.38
PDE6B-209ENST00000476034 NCAPD3P42695 1498 aa36.15■■■■□ 3.38
PDE6B-209ENST00000476034 MROH2BQ7Z745 1585 aa36.12■■■■□ 3.37
PDE6B-209ENST00000476034 PEG3Q9GZU2 1588 aa36.08■■■■□ 3.37
PDE6B-209ENST00000476034 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
PDE6B-209ENST00000476034 BAZ1BQ9UIG0 1483 aaKnown RBP35.9■■■■□ 3.34
PDE6B-209ENST00000476034 WIZO95785 1651 aa35.76■■■■□ 3.32
PDE6B-209ENST00000476034 RSF1Q96T23 1441 aaPredicted RBP35.69■■■■□ 3.3
PDE6B-209ENST00000476034 TOP2AP11388 1531 aaKnown RBP35.4■■■■□ 3.26
PDE6B-209ENST00000476034 NESP48681 1621 aa35.27■■■■□ 3.24
PDE6B-209ENST00000476034 LAMC3Q9Y6N6 1575 aa35.25■■■■□ 3.23
PDE6B-209ENST00000476034 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
PDE6B-209ENST00000476034 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
PDE6B-209ENST00000476034 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
PDE6B-209ENST00000476034 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
PDE6B-209ENST00000476034 CCDC88BA6NC98 1476 aa34.93■■■■□ 3.18
PDE6B-209ENST00000476034 CFTRP13569 1480 aa34.9■■■■□ 3.18
PDE6B-209ENST00000476034 CUX2O14529 1486 aa34.81■■■■□ 3.16
PDE6B-209ENST00000476034 THOC2Q8NI27 1593 aaKnown RBP34.81■■■■□ 3.16
PDE6B-209ENST00000476034 PRDM2Q13029 1718 aa34.77■■■■□ 3.16
PDE6B-209ENST00000476034 SUPT5HO00267 1087 aaKnown RBP34.72■■■■□ 3.15
PDE6B-209ENST00000476034 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
PDE6B-209ENST00000476034 CEP164Q9UPV0 1460 aa34.68■■■■□ 3.14
PDE6B-209ENST00000476034 MRC2Q9UBG0 1479 aa34.63■■■■□ 3.13
PDE6B-209ENST00000476034 WDR62O43379 1518 aa34.54■■■■□ 3.12
PDE6B-209ENST00000476034 URB2Q14146 1524 aaKnown RBP34.35■■■■□ 3.09
PDE6B-209ENST00000476034 ABCC8Q09428 1581 aa34.18■■■■□ 3.06
PDE6B-209ENST00000476034 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
PDE6B-209ENST00000476034 TOPBP1Q92547 1522 aa34.15■■■■□ 3.06
PDE6B-209ENST00000476034 IFT140Q96RY7 1462 aa33.95■■■■□ 3.02
PDE6B-209ENST00000476034 CUX1P39880 1505 aa33.9■■■■□ 3.02
PDE6B-209ENST00000476034 POLA1P09884 1462 aaPredicted RBP33.86■■■■□ 3.01
PDE6B-209ENST00000476034 TARBP1Q13395 1621 aaKnown RBP33.82■■■■□ 3
PDE6B-209ENST00000476034 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
PDE6B-209ENST00000476034 ZNF608Q9ULD9 1512 aaPredicted RBP33.76■■■■□ 3
PDE6B-209ENST00000476034 EIF4G3O43432 1585 aaKnown RBP33.71■■■□□ 2.99
PDE6B-209ENST00000476034 SOGA1O94964 1423 aa33.7■■■□□ 2.98
PDE6B-209ENST00000476034 RAD54L2Q9Y4B4 1467 aa33.68■■■□□ 2.98
PDE6B-209ENST00000476034 BIVM-ERCC5R4GMW8 1640 aa33.68■■■□□ 2.98
PDE6B-209ENST00000476034 WRNQ14191 1432 aaPredicted RBP eCLIP33.67■■■□□ 2.98
PDE6B-209ENST00000476034 TOP2BQ02880 1626 aa33.64■■■□□ 2.98
PDE6B-209ENST00000476034 DNAJC5Q9H3Z4 198 aa33.64■■■□□ 2.98
PDE6B-209ENST00000476034 SYNJ1O43426 1573 aa33.62■■■□□ 2.97
PDE6B-209ENST00000476034 WDR97A6NE52 1622 aa33.6■■■□□ 2.97
PDE6B-209ENST00000476034 AQRO60306 1485 aaKnown RBP eCLIP33.55■■■□□ 2.96
PDE6B-209ENST00000476034 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
PDE6B-209ENST00000476034 ABCA10Q8WWZ4 1543 aa33.47■■■□□ 2.95
PDE6B-209ENST00000476034 ABCA5Q8WWZ7 1642 aa33.38■■■□□ 2.93
PDE6B-209ENST00000476034 PBRM1Q86U86 1689 aa33.35■■■□□ 2.93
PDE6B-209ENST00000476034 GRIN2BQ13224 1484 aa33.33■■■□□ 2.93
PDE6B-209ENST00000476034 GAPVD1Q14C86 1478 aa33.33■■■□□ 2.93
PDE6B-209ENST00000476034 CHD1O14646 1710 aa33.29■■■□□ 2.92
PDE6B-209ENST00000476034 OSCARQ8IYS5 282 aa33.29■■■□□ 2.92
PDE6B-209ENST00000476034 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
PDE6B-209ENST00000476034 MAGI1Q96QZ7 1491 aaPredicted RBP33.27■■■□□ 2.92
PDE6B-209ENST00000476034 SYNJ2O15056 1496 aa33.12■■■□□ 2.89
PDE6B-209ENST00000476034 FBLN2P98095 1184 aa33.12■■■□□ 2.89
PDE6B-209ENST00000476034 ERICH3Q5RHP9 1530 aa33.09■■■□□ 2.89
PDE6B-209ENST00000476034 ADAMTS12P58397 1594 aa33.05■■■□□ 2.88
PDE6B-209ENST00000476034 CHMP7Q8WUX9 453 aaPredicted RBP33.04■■■□□ 2.88
PDE6B-209ENST00000476034 KIF27Q86VH2 1401 aa32.97■■■□□ 2.87
PDE6B-209ENST00000476034 FHAD1B1AJZ9 1412 aa32.94■■■□□ 2.86
PDE6B-209ENST00000476034 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
PDE6B-209ENST00000476034 CLASP1Q7Z460 1538 aa32.91■■■□□ 2.86
PDE6B-209ENST00000476034 RIMBP3CA6NJZ7 1639 aa32.84■■■□□ 2.85
PDE6B-209ENST00000476034 RIMBP3BA6NNM3 1639 aa32.84■■■□□ 2.85
PDE6B-209ENST00000476034 RIMBP3Q9UFD9 1639 aa32.84■■■□□ 2.85
PDE6B-209ENST00000476034 CUL7Q14999 1698 aa32.83■■■□□ 2.85
PDE6B-209ENST00000476034 TRIM41Q8WV44 630 aa32.82■■■□□ 2.84
PDE6B-209ENST00000476034 ARHGEF11O15085 1522 aa32.82■■■□□ 2.84
PDE6B-209ENST00000476034 IGF1RP08069 1367 aa32.79■■■□□ 2.84
PDE6B-209ENST00000476034 NUP160Q12769 1436 aa32.76■■■□□ 2.83
PDE6B-209ENST00000476034 CEP170Q5SW79 1584 aa32.75■■■□□ 2.83
PDE6B-209ENST00000476034 RUSC2Q8N2Y8 1516 aa32.63■■■□□ 2.81
PDE6B-209ENST00000476034 CARMIL1Q5VZK9 1371 aa32.61■■■□□ 2.81
PDE6B-209ENST00000476034 SHROOM2Q13796 1616 aa32.56■■■□□ 2.8
PDE6B-209ENST00000476034 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
PDE6B-209ENST00000476034 RAPGEF2Q9Y4G8 1499 aa32.45■■■□□ 2.79
PDE6B-209ENST00000476034 KIAA0586Q9BVV6 1533 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms