RNA–Protein interactions for RNA: ENST00000476010.5

SFI1-220, Transcript of SFI1 centrin binding protein, humanhuman

TSL 4

Gene SFI1, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-220ENST00000476010 NISCHQ9Y2I1 1504 aa29.57■■■□□ 2.32
SFI1-220ENST00000476010 ABCC9O60706 1549 aa27.25■■□□□ 1.95
SFI1-220ENST00000476010 CCDC180Q9P1Z9 1646 aa26.92■■□□□ 1.9
SFI1-220ENST00000476010 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
SFI1-220ENST00000476010 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
SFI1-220ENST00000476010 NACADO15069 1562 aa25.55■■□□□ 1.68
SFI1-220ENST00000476010 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.62
SFI1-220ENST00000476010 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
SFI1-220ENST00000476010 MYO15BQ96JP2 1530 aa25.09■■□□□ 1.61
SFI1-220ENST00000476010 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
SFI1-220ENST00000476010 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
SFI1-220ENST00000476010 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
SFI1-220ENST00000476010 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
SFI1-220ENST00000476010 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
SFI1-220ENST00000476010 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
SFI1-220ENST00000476010 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
SFI1-220ENST00000476010 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
SFI1-220ENST00000476010 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
SFI1-220ENST00000476010 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
SFI1-220ENST00000476010 CUX2O14529 1486 aa23.9■■□□□ 1.42
SFI1-220ENST00000476010 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
SFI1-220ENST00000476010 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
SFI1-220ENST00000476010 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
SFI1-220ENST00000476010 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
SFI1-220ENST00000476010 SMARCA2P51531 1590 aa23.33■■□□□ 1.33
SFI1-220ENST00000476010 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
SFI1-220ENST00000476010 NESP48681 1621 aa23.22■■□□□ 1.31
SFI1-220ENST00000476010 SMARCA4P51532 1647 aa23.21■■□□□ 1.31
SFI1-220ENST00000476010 LAMC3Q9Y6N6 1575 aa23.15■■□□□ 1.3
SFI1-220ENST00000476010 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
SFI1-220ENST00000476010 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
SFI1-220ENST00000476010 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
SFI1-220ENST00000476010 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
SFI1-220ENST00000476010 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
SFI1-220ENST00000476010 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
SFI1-220ENST00000476010 MRC2Q9UBG0 1479 aa22.82■■□□□ 1.24
SFI1-220ENST00000476010 WDR62O43379 1518 aa22.82■■□□□ 1.24
SFI1-220ENST00000476010 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
SFI1-220ENST00000476010 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
SFI1-220ENST00000476010 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
SFI1-220ENST00000476010 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
SFI1-220ENST00000476010 FANCD2Q9BXW9 1451 aa22.5■■□□□ 1.19
SFI1-220ENST00000476010 CFTRP13569 1480 aa22.41■■□□□ 1.18
SFI1-220ENST00000476010 WIZO95785 1651 aa22.4■■□□□ 1.18
SFI1-220ENST00000476010 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.17
SFI1-220ENST00000476010 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.17
SFI1-220ENST00000476010 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.17
SFI1-220ENST00000476010 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
SFI1-220ENST00000476010 ARHGEF11O15085 1522 aa22.27■■□□□ 1.16
SFI1-220ENST00000476010 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
SFI1-220ENST00000476010 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
SFI1-220ENST00000476010 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
SFI1-220ENST00000476010 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
SFI1-220ENST00000476010 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
SFI1-220ENST00000476010 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
SFI1-220ENST00000476010 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
SFI1-220ENST00000476010 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
SFI1-220ENST00000476010 CYB5RLQ6IPT4 315 aa22■■□□□ 1.11
SFI1-220ENST00000476010 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
SFI1-220ENST00000476010 CHD1O14646 1710 aa21.97■■□□□ 1.11
SFI1-220ENST00000476010 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
SFI1-220ENST00000476010 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
SFI1-220ENST00000476010 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
SFI1-220ENST00000476010 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
SFI1-220ENST00000476010 AQRO60306 1485 aaKnown RBP eCLIP21.82■■□□□ 1.08
SFI1-220ENST00000476010 WDR97A6NE52 1622 aa21.77■■□□□ 1.08
SFI1-220ENST00000476010 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
SFI1-220ENST00000476010 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
SFI1-220ENST00000476010 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
SFI1-220ENST00000476010 FBLN2P98095 1184 aa21.72■■□□□ 1.07
SFI1-220ENST00000476010 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
SFI1-220ENST00000476010 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
SFI1-220ENST00000476010 SNAPC4Q5SXM2 1469 aa21.64■■□□□ 1.05
SFI1-220ENST00000476010 SOGA1O94964 1423 aa21.6■■□□□ 1.05
SFI1-220ENST00000476010 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
SFI1-220ENST00000476010 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
SFI1-220ENST00000476010 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
SFI1-220ENST00000476010 CHMP7Q8WUX9 453 aaPredicted RBP21.55■■□□□ 1.04
SFI1-220ENST00000476010 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
SFI1-220ENST00000476010 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
SFI1-220ENST00000476010 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
SFI1-220ENST00000476010 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
SFI1-220ENST00000476010 CUX1P39880 1505 aa21.39■■□□□ 1.02
SFI1-220ENST00000476010 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
SFI1-220ENST00000476010 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
SFI1-220ENST00000476010 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
SFI1-220ENST00000476010 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
SFI1-220ENST00000476010 ERCC6L2Q5T890 1561 aa21.24■□□□□ 0.99
SFI1-220ENST00000476010 SHROOM2Q13796 1616 aa21.24■□□□□ 0.99
SFI1-220ENST00000476010 NUP160Q12769 1436 aa21.23■□□□□ 0.99
SFI1-220ENST00000476010 KIF13AQ9H1H9 1805 aa21.23■□□□□ 0.99
SFI1-220ENST00000476010 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
SFI1-220ENST00000476010 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
SFI1-220ENST00000476010 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
SFI1-220ENST00000476010 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
SFI1-220ENST00000476010 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
SFI1-220ENST00000476010 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
SFI1-220ENST00000476010 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
SFI1-220ENST00000476010 DIP2BQ9P265 1576 aa20.99■□□□□ 0.95
SFI1-220ENST00000476010 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms