RNA–Protein interactions for RNA: ENST00000475959.1

GTPBP1-208, Transcript of GTP binding protein 1, humanhuman

TSL 2

Gene GTPBP1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP1-208ENST00000475959 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
GTPBP1-208ENST00000475959 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
GTPBP1-208ENST00000475959 ABCC9O60706 1549 aa24.01■■□□□ 1.43
GTPBP1-208ENST00000475959 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
GTPBP1-208ENST00000475959 NACADO15069 1562 aa22.98■■□□□ 1.27
GTPBP1-208ENST00000475959 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
GTPBP1-208ENST00000475959 MYO15BQ96JP2 1530 aa22.8■■□□□ 1.24
GTPBP1-208ENST00000475959 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
GTPBP1-208ENST00000475959 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
GTPBP1-208ENST00000475959 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
GTPBP1-208ENST00000475959 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
GTPBP1-208ENST00000475959 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
GTPBP1-208ENST00000475959 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
GTPBP1-208ENST00000475959 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
GTPBP1-208ENST00000475959 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
GTPBP1-208ENST00000475959 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
GTPBP1-208ENST00000475959 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.07
GTPBP1-208ENST00000475959 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
GTPBP1-208ENST00000475959 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
GTPBP1-208ENST00000475959 BAZ1AQ9NRL2 1556 aaPredicted RBP21.3■■□□□ 1
GTPBP1-208ENST00000475959 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
GTPBP1-208ENST00000475959 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
GTPBP1-208ENST00000475959 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
GTPBP1-208ENST00000475959 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
GTPBP1-208ENST00000475959 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
GTPBP1-208ENST00000475959 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
GTPBP1-208ENST00000475959 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
GTPBP1-208ENST00000475959 WIZO95785 1651 aa21.05■□□□□ 0.96
GTPBP1-208ENST00000475959 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
GTPBP1-208ENST00000475959 NESP48681 1621 aa20.81■□□□□ 0.92
GTPBP1-208ENST00000475959 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
GTPBP1-208ENST00000475959 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
GTPBP1-208ENST00000475959 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
GTPBP1-208ENST00000475959 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
GTPBP1-208ENST00000475959 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
GTPBP1-208ENST00000475959 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
GTPBP1-208ENST00000475959 PRDM2Q13029 1718 aa20.48■□□□□ 0.87
GTPBP1-208ENST00000475959 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
GTPBP1-208ENST00000475959 CUX2O14529 1486 aa20.45■□□□□ 0.86
GTPBP1-208ENST00000475959 CFTRP13569 1480 aa20.44■□□□□ 0.86
GTPBP1-208ENST00000475959 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
GTPBP1-208ENST00000475959 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
GTPBP1-208ENST00000475959 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
GTPBP1-208ENST00000475959 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
GTPBP1-208ENST00000475959 WDR62O43379 1518 aa20.32■□□□□ 0.84
GTPBP1-208ENST00000475959 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
GTPBP1-208ENST00000475959 SUPT5HO00267 1087 aaKnown RBP20.21■□□□□ 0.83
GTPBP1-208ENST00000475959 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
GTPBP1-208ENST00000475959 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
GTPBP1-208ENST00000475959 CUX1P39880 1505 aa19.92■□□□□ 0.78
GTPBP1-208ENST00000475959 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
GTPBP1-208ENST00000475959 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
GTPBP1-208ENST00000475959 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
GTPBP1-208ENST00000475959 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
GTPBP1-208ENST00000475959 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
GTPBP1-208ENST00000475959 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
GTPBP1-208ENST00000475959 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
GTPBP1-208ENST00000475959 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
GTPBP1-208ENST00000475959 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
GTPBP1-208ENST00000475959 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
GTPBP1-208ENST00000475959 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
GTPBP1-208ENST00000475959 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
GTPBP1-208ENST00000475959 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
GTPBP1-208ENST00000475959 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.755e-8■■■□□ 15.2
GTPBP1-208ENST00000475959 SOGA1O94964 1423 aa19.69■□□□□ 0.74
GTPBP1-208ENST00000475959 CHD1O14646 1710 aa19.68■□□□□ 0.74
GTPBP1-208ENST00000475959 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
GTPBP1-208ENST00000475959 PBRM1Q86U86 1689 aa19.66■□□□□ 0.74
GTPBP1-208ENST00000475959 ABCA5Q8WWZ7 1642 aa19.64■□□□□ 0.73
GTPBP1-208ENST00000475959 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
GTPBP1-208ENST00000475959 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
GTPBP1-208ENST00000475959 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
GTPBP1-208ENST00000475959 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
GTPBP1-208ENST00000475959 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
GTPBP1-208ENST00000475959 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
GTPBP1-208ENST00000475959 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
GTPBP1-208ENST00000475959 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
GTPBP1-208ENST00000475959 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
GTPBP1-208ENST00000475959 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
GTPBP1-208ENST00000475959 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
GTPBP1-208ENST00000475959 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
GTPBP1-208ENST00000475959 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
GTPBP1-208ENST00000475959 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
GTPBP1-208ENST00000475959 FBLN2P98095 1184 aa19.36■□□□□ 0.69
GTPBP1-208ENST00000475959 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
GTPBP1-208ENST00000475959 GRIN2AQ12879 1464 aa19.31■□□□□ 0.68
GTPBP1-208ENST00000475959 CEP170Q5SW79 1584 aa19.3■□□□□ 0.68
GTPBP1-208ENST00000475959 CHMP7Q8WUX9 453 aaPredicted RBP19.27■□□□□ 0.68
GTPBP1-208ENST00000475959 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
GTPBP1-208ENST00000475959 CUL7Q14999 1698 aa19.24■□□□□ 0.67
GTPBP1-208ENST00000475959 NUP160Q12769 1436 aa19.22■□□□□ 0.67
GTPBP1-208ENST00000475959 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
GTPBP1-208ENST00000475959 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
GTPBP1-208ENST00000475959 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
GTPBP1-208ENST00000475959 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
GTPBP1-208ENST00000475959 ERCC6L2Q5T890 1561 aa19.16■□□□□ 0.66
GTPBP1-208ENST00000475959 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
GTPBP1-208ENST00000475959 IGF1RP08069 1367 aa19.15■□□□□ 0.66
GTPBP1-208ENST00000475959 CARMIL1Q5VZK9 1371 aa19.03■□□□□ 0.64
GTPBP1-208ENST00000475959 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms