RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 NISCHQ9Y2I1 1504 aa23.11■■□□□ 1.29
SEMA3C-208ENST00000475955 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
SEMA3C-208ENST00000475955 ABCC9O60706 1549 aa20.39■□□□□ 0.85
SEMA3C-208ENST00000475955 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
SEMA3C-208ENST00000475955 NACADO15069 1562 aa19.42■□□□□ 0.7
SEMA3C-208ENST00000475955 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
SEMA3C-208ENST00000475955 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
SEMA3C-208ENST00000475955 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
SEMA3C-208ENST00000475955 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
SEMA3C-208ENST00000475955 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.64
SEMA3C-208ENST00000475955 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
SEMA3C-208ENST00000475955 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
SEMA3C-208ENST00000475955 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
SEMA3C-208ENST00000475955 SCRIBQ14160 1630 aa18.83■□□□□ 0.61
SEMA3C-208ENST00000475955 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
SEMA3C-208ENST00000475955 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
SEMA3C-208ENST00000475955 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
SEMA3C-208ENST00000475955 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
SEMA3C-208ENST00000475955 SMARCA4P51532 1647 aa18■□□□□ 0.47
SEMA3C-208ENST00000475955 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
SEMA3C-208ENST00000475955 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
SEMA3C-208ENST00000475955 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
SEMA3C-208ENST00000475955 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
SEMA3C-208ENST00000475955 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
SEMA3C-208ENST00000475955 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
SEMA3C-208ENST00000475955 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
SEMA3C-208ENST00000475955 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
SEMA3C-208ENST00000475955 WIZO95785 1651 aa17.67■□□□□ 0.42
SEMA3C-208ENST00000475955 NESP48681 1621 aa17.62■□□□□ 0.41
SEMA3C-208ENST00000475955 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
SEMA3C-208ENST00000475955 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
SEMA3C-208ENST00000475955 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
SEMA3C-208ENST00000475955 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
SEMA3C-208ENST00000475955 CUX2O14529 1486 aa17.43■□□□□ 0.38
SEMA3C-208ENST00000475955 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
SEMA3C-208ENST00000475955 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
SEMA3C-208ENST00000475955 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
SEMA3C-208ENST00000475955 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
SEMA3C-208ENST00000475955 CFTRP13569 1480 aa17.25■□□□□ 0.35
SEMA3C-208ENST00000475955 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
SEMA3C-208ENST00000475955 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
SEMA3C-208ENST00000475955 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
SEMA3C-208ENST00000475955 PRDM2Q13029 1718 aa17.19■□□□□ 0.34
SEMA3C-208ENST00000475955 WDR62O43379 1518 aa17.18■□□□□ 0.34
SEMA3C-208ENST00000475955 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
SEMA3C-208ENST00000475955 DNAJC5Q9H3Z4 198 aa17.15■□□□□ 0.34
SEMA3C-208ENST00000475955 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.32
SEMA3C-208ENST00000475955 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
SEMA3C-208ENST00000475955 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
SEMA3C-208ENST00000475955 DNMBPQ6XZF7 1577 aa16.87■□□□□ 0.29
SEMA3C-208ENST00000475955 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
SEMA3C-208ENST00000475955 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.28
SEMA3C-208ENST00000475955 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
SEMA3C-208ENST00000475955 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
SEMA3C-208ENST00000475955 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
SEMA3C-208ENST00000475955 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
SEMA3C-208ENST00000475955 CUX1P39880 1505 aa16.75■□□□□ 0.27
SEMA3C-208ENST00000475955 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
SEMA3C-208ENST00000475955 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
SEMA3C-208ENST00000475955 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEMA3C-208ENST00000475955 SOGA1O94964 1423 aa16.66■□□□□ 0.26
SEMA3C-208ENST00000475955 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
SEMA3C-208ENST00000475955 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
SEMA3C-208ENST00000475955 CHD1O14646 1710 aa16.62■□□□□ 0.25
SEMA3C-208ENST00000475955 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
SEMA3C-208ENST00000475955 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
SEMA3C-208ENST00000475955 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
SEMA3C-208ENST00000475955 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
SEMA3C-208ENST00000475955 TOP2BQ02880 1626 aa16.52■□□□□ 0.24
SEMA3C-208ENST00000475955 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
SEMA3C-208ENST00000475955 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
SEMA3C-208ENST00000475955 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
SEMA3C-208ENST00000475955 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
SEMA3C-208ENST00000475955 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
SEMA3C-208ENST00000475955 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
SEMA3C-208ENST00000475955 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
SEMA3C-208ENST00000475955 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
SEMA3C-208ENST00000475955 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
SEMA3C-208ENST00000475955 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
SEMA3C-208ENST00000475955 FBLN2P98095 1184 aa16.46■□□□□ 0.23
SEMA3C-208ENST00000475955 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
SEMA3C-208ENST00000475955 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
SEMA3C-208ENST00000475955 SYNJ2O15056 1496 aa16.4■□□□□ 0.22
SEMA3C-208ENST00000475955 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
SEMA3C-208ENST00000475955 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
SEMA3C-208ENST00000475955 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
SEMA3C-208ENST00000475955 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
SEMA3C-208ENST00000475955 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
SEMA3C-208ENST00000475955 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
SEMA3C-208ENST00000475955 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
SEMA3C-208ENST00000475955 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
SEMA3C-208ENST00000475955 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
SEMA3C-208ENST00000475955 NUP160Q12769 1436 aa16.23■□□□□ 0.19
SEMA3C-208ENST00000475955 ERCC6L2Q5T890 1561 aa16.2■□□□□ 0.18
SEMA3C-208ENST00000475955 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
SEMA3C-208ENST00000475955 IGF1RP08069 1367 aa16.15■□□□□ 0.18
SEMA3C-208ENST00000475955 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
SEMA3C-208ENST00000475955 CUL7Q14999 1698 aa16.11■□□□□ 0.17
SEMA3C-208ENST00000475955 RUSC2Q8N2Y8 1516 aa16.11■□□□□ 0.17
SEMA3C-208ENST00000475955 PRG4Q92954 1404 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms