RNA–Protein interactions for RNA: ENST00000475930.1

SNAP47-207, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 792 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-207ENST00000475930 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
SNAP47-207ENST00000475930 ABCC9O60706 1549 aa31.07■■■□□ 2.56
SNAP47-207ENST00000475930 CCDC180Q9P1Z9 1646 aa31.03■■■□□ 2.56
SNAP47-207ENST00000475930 RB1CC1Q8TDY2 1594 aa29.57■■■□□ 2.32
SNAP47-207ENST00000475930 NACADO15069 1562 aa29.38■■■□□ 2.29
SNAP47-207ENST00000475930 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
SNAP47-207ENST00000475930 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
SNAP47-207ENST00000475930 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
SNAP47-207ENST00000475930 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
SNAP47-207ENST00000475930 UNC13AQ9UPW8 1703 aa28.86■■■□□ 2.21
SNAP47-207ENST00000475930 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
SNAP47-207ENST00000475930 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
SNAP47-207ENST00000475930 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
SNAP47-207ENST00000475930 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
SNAP47-207ENST00000475930 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
SNAP47-207ENST00000475930 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
SNAP47-207ENST00000475930 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
SNAP47-207ENST00000475930 EIF4G1Q04637 1599 aaKnown RBP28.01■■■□□ 2.07
SNAP47-207ENST00000475930 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
SNAP47-207ENST00000475930 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
SNAP47-207ENST00000475930 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
SNAP47-207ENST00000475930 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
SNAP47-207ENST00000475930 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
SNAP47-207ENST00000475930 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
SNAP47-207ENST00000475930 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
SNAP47-207ENST00000475930 CUX2O14529 1486 aa26.84■■□□□ 1.89
SNAP47-207ENST00000475930 BAZ1AQ9NRL2 1556 aaPredicted RBP26.84■■□□□ 1.89
SNAP47-207ENST00000475930 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
SNAP47-207ENST00000475930 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
SNAP47-207ENST00000475930 NESP48681 1621 aa26.67■■□□□ 1.86
SNAP47-207ENST00000475930 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
SNAP47-207ENST00000475930 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
SNAP47-207ENST00000475930 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
SNAP47-207ENST00000475930 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
SNAP47-207ENST00000475930 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
SNAP47-207ENST00000475930 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
SNAP47-207ENST00000475930 WIZO95785 1651 aa26.28■■□□□ 1.8
SNAP47-207ENST00000475930 MRC2Q9UBG0 1479 aa26.13■■□□□ 1.77
SNAP47-207ENST00000475930 WDR62O43379 1518 aa26.08■■□□□ 1.77
SNAP47-207ENST00000475930 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
SNAP47-207ENST00000475930 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
SNAP47-207ENST00000475930 CFTRP13569 1480 aa25.99■■□□□ 1.75
SNAP47-207ENST00000475930 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
SNAP47-207ENST00000475930 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
SNAP47-207ENST00000475930 URB2Q14146 1524 aaKnown RBP25.76■■□□□ 1.71
SNAP47-207ENST00000475930 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
SNAP47-207ENST00000475930 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
SNAP47-207ENST00000475930 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
SNAP47-207ENST00000475930 OSCARQ8IYS5 282 aa25.62■■□□□ 1.69
SNAP47-207ENST00000475930 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
SNAP47-207ENST00000475930 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
SNAP47-207ENST00000475930 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
SNAP47-207ENST00000475930 ZNF608Q9ULD9 1512 aaPredicted RBP25.45■■□□□ 1.66
SNAP47-207ENST00000475930 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
SNAP47-207ENST00000475930 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
SNAP47-207ENST00000475930 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
SNAP47-207ENST00000475930 RIMBP3CA6NJZ7 1639 aa25.24■■□□□ 1.63
SNAP47-207ENST00000475930 RIMBP3BA6NNM3 1639 aa25.24■■□□□ 1.63
SNAP47-207ENST00000475930 RIMBP3Q9UFD9 1639 aa25.24■■□□□ 1.63
SNAP47-207ENST00000475930 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.63
SNAP47-207ENST00000475930 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
SNAP47-207ENST00000475930 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
SNAP47-207ENST00000475930 SOGA1O94964 1423 aa25.12■■□□□ 1.61
SNAP47-207ENST00000475930 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
SNAP47-207ENST00000475930 CHD1O14646 1710 aa25.1■■□□□ 1.61
SNAP47-207ENST00000475930 FBLN2P98095 1184 aa25.06■■□□□ 1.6
SNAP47-207ENST00000475930 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
SNAP47-207ENST00000475930 FGD5Q6ZNL6 1462 aa25.04■■□□□ 1.6
SNAP47-207ENST00000475930 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
SNAP47-207ENST00000475930 CUX1P39880 1505 aa25.01■■□□□ 1.59
SNAP47-207ENST00000475930 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
SNAP47-207ENST00000475930 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
SNAP47-207ENST00000475930 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
SNAP47-207ENST00000475930 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
SNAP47-207ENST00000475930 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
SNAP47-207ENST00000475930 CHMP7Q8WUX9 453 aaPredicted RBP24.9■■□□□ 1.58
SNAP47-207ENST00000475930 CLASP1Q7Z460 1538 aa24.85■■□□□ 1.57
SNAP47-207ENST00000475930 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
SNAP47-207ENST00000475930 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
SNAP47-207ENST00000475930 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
SNAP47-207ENST00000475930 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
SNAP47-207ENST00000475930 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
SNAP47-207ENST00000475930 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
SNAP47-207ENST00000475930 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
SNAP47-207ENST00000475930 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
SNAP47-207ENST00000475930 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
SNAP47-207ENST00000475930 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
SNAP47-207ENST00000475930 BIVM-ERCC5R4GMW8 1640 aa24.59■■□□□ 1.53
SNAP47-207ENST00000475930 GRIN2AQ12879 1464 aa24.58■■□□□ 1.52
SNAP47-207ENST00000475930 ADAMTS12P58397 1594 aa24.53■■□□□ 1.52
SNAP47-207ENST00000475930 NUP160Q12769 1436 aa24.51■■□□□ 1.51
SNAP47-207ENST00000475930 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
SNAP47-207ENST00000475930 ERICH3Q5RHP9 1530 aa24.47■■□□□ 1.51
SNAP47-207ENST00000475930 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
SNAP47-207ENST00000475930 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
SNAP47-207ENST00000475930 SHROOM2Q13796 1616 aa24.39■■□□□ 1.49
SNAP47-207ENST00000475930 JPH4Q96JJ6 628 aa24.27■■□□□ 1.48
SNAP47-207ENST00000475930 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
SNAP47-207ENST00000475930 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
SNAP47-207ENST00000475930 IGF1RP08069 1367 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms