RNA–Protein interactions for RNA: ENST00000475884.5

PGAP2-216, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 2

Gene PGAP2, Length 745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-216ENST00000475884 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
PGAP2-216ENST00000475884 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
PGAP2-216ENST00000475884 ABCC9O60706 1549 aa24.1■■□□□ 1.45
PGAP2-216ENST00000475884 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
PGAP2-216ENST00000475884 NACADO15069 1562 aa22.91■■□□□ 1.26
PGAP2-216ENST00000475884 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
PGAP2-216ENST00000475884 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
PGAP2-216ENST00000475884 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
PGAP2-216ENST00000475884 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
PGAP2-216ENST00000475884 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
PGAP2-216ENST00000475884 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
PGAP2-216ENST00000475884 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
PGAP2-216ENST00000475884 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
PGAP2-216ENST00000475884 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
PGAP2-216ENST00000475884 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
PGAP2-216ENST00000475884 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
PGAP2-216ENST00000475884 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
PGAP2-216ENST00000475884 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
PGAP2-216ENST00000475884 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
PGAP2-216ENST00000475884 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
PGAP2-216ENST00000475884 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
PGAP2-216ENST00000475884 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
PGAP2-216ENST00000475884 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
PGAP2-216ENST00000475884 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
PGAP2-216ENST00000475884 CUX2O14529 1486 aa20.91■□□□□ 0.94
PGAP2-216ENST00000475884 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
PGAP2-216ENST00000475884 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
PGAP2-216ENST00000475884 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
PGAP2-216ENST00000475884 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
PGAP2-216ENST00000475884 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
PGAP2-216ENST00000475884 NESP48681 1621 aa20.67■□□□□ 0.9
PGAP2-216ENST00000475884 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
PGAP2-216ENST00000475884 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
PGAP2-216ENST00000475884 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
PGAP2-216ENST00000475884 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
PGAP2-216ENST00000475884 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
PGAP2-216ENST00000475884 WIZO95785 1651 aa20.39■□□□□ 0.86
PGAP2-216ENST00000475884 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
PGAP2-216ENST00000475884 WDR62O43379 1518 aa20.3■□□□□ 0.84
PGAP2-216ENST00000475884 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
PGAP2-216ENST00000475884 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
PGAP2-216ENST00000475884 CFTRP13569 1480 aa20.24■□□□□ 0.83
PGAP2-216ENST00000475884 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
PGAP2-216ENST00000475884 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
PGAP2-216ENST00000475884 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.79
PGAP2-216ENST00000475884 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
PGAP2-216ENST00000475884 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
PGAP2-216ENST00000475884 OSCARQ8IYS5 282 aa19.9■□□□□ 0.78
PGAP2-216ENST00000475884 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
PGAP2-216ENST00000475884 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
PGAP2-216ENST00000475884 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
PGAP2-216ENST00000475884 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
PGAP2-216ENST00000475884 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
PGAP2-216ENST00000475884 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
PGAP2-216ENST00000475884 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
PGAP2-216ENST00000475884 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
PGAP2-216ENST00000475884 POLA1P09884 1462 aaPredicted RBP19.62■□□□□ 0.73
PGAP2-216ENST00000475884 RIMBP3CA6NJZ7 1639 aa19.58■□□□□ 0.73
PGAP2-216ENST00000475884 RIMBP3BA6NNM3 1639 aa19.58■□□□□ 0.73
PGAP2-216ENST00000475884 RIMBP3Q9UFD9 1639 aa19.58■□□□□ 0.73
PGAP2-216ENST00000475884 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.72
PGAP2-216ENST00000475884 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
PGAP2-216ENST00000475884 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
PGAP2-216ENST00000475884 SOGA1O94964 1423 aa19.52■□□□□ 0.72
PGAP2-216ENST00000475884 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
PGAP2-216ENST00000475884 CHD1O14646 1710 aa19.48■□□□□ 0.71
PGAP2-216ENST00000475884 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
PGAP2-216ENST00000475884 CUX1P39880 1505 aa19.45■□□□□ 0.7
PGAP2-216ENST00000475884 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
PGAP2-216ENST00000475884 MAGI1Q96QZ7 1491 aaPredicted RBP19.43■□□□□ 0.7
PGAP2-216ENST00000475884 FBLN2P98095 1184 aa19.42■□□□□ 0.7
PGAP2-216ENST00000475884 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
PGAP2-216ENST00000475884 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
PGAP2-216ENST00000475884 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
PGAP2-216ENST00000475884 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
PGAP2-216ENST00000475884 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
PGAP2-216ENST00000475884 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
PGAP2-216ENST00000475884 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
PGAP2-216ENST00000475884 SYNJ2O15056 1496 aa19.34■□□□□ 0.69
PGAP2-216ENST00000475884 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
PGAP2-216ENST00000475884 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
PGAP2-216ENST00000475884 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
PGAP2-216ENST00000475884 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
PGAP2-216ENST00000475884 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
PGAP2-216ENST00000475884 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.679e-6■■■■■ 50.1
PGAP2-216ENST00000475884 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
PGAP2-216ENST00000475884 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
PGAP2-216ENST00000475884 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
PGAP2-216ENST00000475884 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
PGAP2-216ENST00000475884 ADAMTS12P58397 1594 aa19.11■□□□□ 0.65
PGAP2-216ENST00000475884 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
PGAP2-216ENST00000475884 NUP160Q12769 1436 aa19.09■□□□□ 0.65
PGAP2-216ENST00000475884 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
PGAP2-216ENST00000475884 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
PGAP2-216ENST00000475884 SHROOM2Q13796 1616 aa18.99■□□□□ 0.63
PGAP2-216ENST00000475884 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
PGAP2-216ENST00000475884 PRG4Q92954 1404 aaPredicted RBP18.86■□□□□ 0.61
PGAP2-216ENST00000475884 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
PGAP2-216ENST00000475884 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
PGAP2-216ENST00000475884 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms