RNA–Protein interactions for RNA: ENST00000475831.1

GBX1-202, Transcript of gastrulation brain homeobox 1, humanhuman

TSL 4

Gene GBX1, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-202ENST00000475831 NISCHQ9Y2I1 1504 aa41.8■■■■■ 4.28
GBX1-202ENST00000475831 CCDC180Q9P1Z9 1646 aa37.05■■■■□ 3.52
GBX1-202ENST00000475831 ABCC9O60706 1549 aa36.52■■■■□ 3.44
GBX1-202ENST00000475831 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
GBX1-202ENST00000475831 RB1CC1Q8TDY2 1594 aa34.98■■■■□ 3.19
GBX1-202ENST00000475831 NACADO15069 1562 aa34.92■■■■□ 3.18
GBX1-202ENST00000475831 ZCCHC6Q5VYS8 1495 aaKnown RBP34.75■■■■□ 3.15
GBX1-202ENST00000475831 MYO15BQ96JP2 1530 aa34.63■■■■□ 3.13
GBX1-202ENST00000475831 DCAF1Q9Y4B6 1507 aa34.49■■■■□ 3.11
GBX1-202ENST00000475831 PABPN1Q86U42 306 aaKnown RBP eCLIP34.23■■■■□ 3.07
GBX1-202ENST00000475831 UNC13AQ9UPW8 1703 aa34.19■■■■□ 3.06
GBX1-202ENST00000475831 BICRAQ9NZM4 1560 aa33.97■■■■□ 3.03
GBX1-202ENST00000475831 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
GBX1-202ENST00000475831 DNAJC5BQ9UF47 199 aa33.71■■■□□ 2.99
GBX1-202ENST00000475831 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
GBX1-202ENST00000475831 EIF4G1Q04637 1599 aaKnown RBP33.05■■■□□ 2.88
GBX1-202ENST00000475831 CC2D2AQ9P2K1 1620 aa32.96■■■□□ 2.87
GBX1-202ENST00000475831 CECR2Q9BXF3 1484 aa32.78■■■□□ 2.84
GBX1-202ENST00000475831 SMARCA4P51532 1647 aa32.41■■■□□ 2.78
GBX1-202ENST00000475831 BAZ1AQ9NRL2 1556 aaPredicted RBP32.35■■■□□ 2.77
GBX1-202ENST00000475831 ATAD2BQ9ULI0 1458 aa32.3■■■□□ 2.76
GBX1-202ENST00000475831 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
GBX1-202ENST00000475831 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
GBX1-202ENST00000475831 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
GBX1-202ENST00000475831 PEG3Q9GZU2 1588 aa32.04■■■□□ 2.72
GBX1-202ENST00000475831 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
GBX1-202ENST00000475831 BAZ1BQ9UIG0 1483 aaKnown RBP32.02■■■□□ 2.72
GBX1-202ENST00000475831 WIZO95785 1651 aa31.89■■■□□ 2.7
GBX1-202ENST00000475831 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
GBX1-202ENST00000475831 NESP48681 1621 aa31.59■■■□□ 2.65
GBX1-202ENST00000475831 TOP2AP11388 1531 aaKnown RBP31.48■■■□□ 2.63
GBX1-202ENST00000475831 ERCC6Q03468 1493 aa31.44■■■□□ 2.62
GBX1-202ENST00000475831 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
GBX1-202ENST00000475831 LAMC3Q9Y6N6 1575 aa31.38■■■□□ 2.61
GBX1-202ENST00000475831 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
GBX1-202ENST00000475831 CCDC88BA6NC98 1476 aa31.22■■■□□ 2.59
GBX1-202ENST00000475831 SUPT5HO00267 1087 aaKnown RBP31.2■■■□□ 2.59
GBX1-202ENST00000475831 CFTRP13569 1480 aa31.13■■■□□ 2.57
GBX1-202ENST00000475831 KIF21AQ7Z4S6 1674 aa31.13■■■□□ 2.57
GBX1-202ENST00000475831 CUX2O14529 1486 aa31.05■■■□□ 2.56
GBX1-202ENST00000475831 FANCD2Q9BXW9 1451 aa30.99■■■□□ 2.55
GBX1-202ENST00000475831 THOC2Q8NI27 1593 aaKnown RBP30.99■■■□□ 2.55
GBX1-202ENST00000475831 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
GBX1-202ENST00000475831 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.53
GBX1-202ENST00000475831 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
GBX1-202ENST00000475831 WDR62O43379 1518 aa30.75■■■□□ 2.51
GBX1-202ENST00000475831 URB2Q14146 1524 aaKnown RBP30.69■■■□□ 2.5
GBX1-202ENST00000475831 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
GBX1-202ENST00000475831 ABCC8Q09428 1581 aa30.44■■■□□ 2.46
GBX1-202ENST00000475831 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
GBX1-202ENST00000475831 DNAJC5Q9H3Z4 198 aa30.34■■■□□ 2.45
GBX1-202ENST00000475831 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
GBX1-202ENST00000475831 CUX1P39880 1505 aa30.24■■■□□ 2.43
GBX1-202ENST00000475831 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
GBX1-202ENST00000475831 POLA1P09884 1462 aaPredicted RBP30.21■■■□□ 2.43
GBX1-202ENST00000475831 RAD54L2Q9Y4B4 1467 aa30.17■■■□□ 2.42
GBX1-202ENST00000475831 SOGA1O94964 1423 aa30.16■■■□□ 2.42
GBX1-202ENST00000475831 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
GBX1-202ENST00000475831 TARBP1Q13395 1621 aaKnown RBP30.12■■■□□ 2.41
GBX1-202ENST00000475831 AQRO60306 1485 aaKnown RBP eCLIP30.08■■■□□ 2.41
GBX1-202ENST00000475831 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
GBX1-202ENST00000475831 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
GBX1-202ENST00000475831 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
GBX1-202ENST00000475831 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
GBX1-202ENST00000475831 OSCARQ8IYS5 282 aa29.93■■■□□ 2.38
GBX1-202ENST00000475831 TOP2BQ02880 1626 aa29.91■■■□□ 2.38
GBX1-202ENST00000475831 BIVM-ERCC5R4GMW8 1640 aa29.89■■■□□ 2.37
GBX1-202ENST00000475831 FBLN2P98095 1184 aa29.82■■■□□ 2.36
GBX1-202ENST00000475831 ABCA10Q8WWZ4 1543 aa29.81■■■□□ 2.36
GBX1-202ENST00000475831 WDR97A6NE52 1622 aa29.79■■■□□ 2.36
GBX1-202ENST00000475831 GAPVD1Q14C86 1478 aa29.77■■■□□ 2.36
GBX1-202ENST00000475831 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
GBX1-202ENST00000475831 SNAPC4Q5SXM2 1469 aa29.72■■■□□ 2.35
GBX1-202ENST00000475831 CHMP7Q8WUX9 453 aaPredicted RBP29.68■■■□□ 2.34
GBX1-202ENST00000475831 ABCA5Q8WWZ7 1642 aa29.66■■■□□ 2.34
GBX1-202ENST00000475831 CHD1O14646 1710 aa29.65■■■□□ 2.34
GBX1-202ENST00000475831 MAGI1Q96QZ7 1491 aaPredicted RBP29.63■■■□□ 2.33
GBX1-202ENST00000475831 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
GBX1-202ENST00000475831 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
GBX1-202ENST00000475831 ERICH3Q5RHP9 1530 aa29.44■■■□□ 2.3
GBX1-202ENST00000475831 TRIM41Q8WV44 630 aa29.42■■■□□ 2.3
GBX1-202ENST00000475831 KIF27Q86VH2 1401 aa29.41■■■□□ 2.3
GBX1-202ENST00000475831 FHAD1B1AJZ9 1412 aa29.4■■■□□ 2.3
GBX1-202ENST00000475831 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
GBX1-202ENST00000475831 IGF1RP08069 1367 aa29.38■■■□□ 2.29
GBX1-202ENST00000475831 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
GBX1-202ENST00000475831 RIMBP3CA6NJZ7 1639 aa29.34■■■□□ 2.29
GBX1-202ENST00000475831 RIMBP3BA6NNM3 1639 aa29.34■■■□□ 2.29
GBX1-202ENST00000475831 RIMBP3Q9UFD9 1639 aa29.34■■■□□ 2.29
GBX1-202ENST00000475831 ARHGEF11O15085 1522 aa29.32■■■□□ 2.28
GBX1-202ENST00000475831 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
GBX1-202ENST00000475831 CYB5RLQ6IPT4 315 aa29.23■■■□□ 2.27
GBX1-202ENST00000475831 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
GBX1-202ENST00000475831 NUP160Q12769 1436 aa29.21■■■□□ 2.27
GBX1-202ENST00000475831 CEP170Q5SW79 1584 aa29.21■■■□□ 2.27
GBX1-202ENST00000475831 CARMIL1Q5VZK9 1371 aa29.18■■■□□ 2.26
GBX1-202ENST00000475831 CUL7Q14999 1698 aa29.12■■■□□ 2.25
GBX1-202ENST00000475831 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
GBX1-202ENST00000475831 JPH4Q96JJ6 628 aa29.07■■■□□ 2.24
GBX1-202ENST00000475831 CHIC1Q5VXU3 224 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms