RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.68
SNX5-208ENST00000475716 ABCC9O60706 1549 aa23.69■■□□□ 1.38
SNX5-208ENST00000475716 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
SNX5-208ENST00000475716 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
SNX5-208ENST00000475716 RB1CC1Q8TDY2 1594 aa22.19■■□□□ 1.14
SNX5-208ENST00000475716 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
SNX5-208ENST00000475716 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
SNX5-208ENST00000475716 NACADO15069 1562 aa21.93■■□□□ 1.1
SNX5-208ENST00000475716 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
SNX5-208ENST00000475716 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
SNX5-208ENST00000475716 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
SNX5-208ENST00000475716 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
SNX5-208ENST00000475716 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
SNX5-208ENST00000475716 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
SNX5-208ENST00000475716 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
SNX5-208ENST00000475716 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
SNX5-208ENST00000475716 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
SNX5-208ENST00000475716 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
SNX5-208ENST00000475716 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
SNX5-208ENST00000475716 CUX2O14529 1486 aa20.5■□□□□ 0.87
SNX5-208ENST00000475716 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
SNX5-208ENST00000475716 NCAPD3P42695 1498 aa20.33■□□□□ 0.85
SNX5-208ENST00000475716 NESP48681 1621 aa20.23■□□□□ 0.83
SNX5-208ENST00000475716 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
SNX5-208ENST00000475716 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
SNX5-208ENST00000475716 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
SNX5-208ENST00000475716 HMGXB3Q12766 1538 aa20.02■□□□□ 0.8
SNX5-208ENST00000475716 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
SNX5-208ENST00000475716 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
SNX5-208ENST00000475716 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
SNX5-208ENST00000475716 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
SNX5-208ENST00000475716 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
SNX5-208ENST00000475716 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
SNX5-208ENST00000475716 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
SNX5-208ENST00000475716 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
SNX5-208ENST00000475716 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
SNX5-208ENST00000475716 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
SNX5-208ENST00000475716 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
SNX5-208ENST00000475716 OSCARQ8IYS5 282 aa19.64■□□□□ 0.73
SNX5-208ENST00000475716 WDR62O43379 1518 aa19.61■□□□□ 0.73
SNX5-208ENST00000475716 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
SNX5-208ENST00000475716 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
SNX5-208ENST00000475716 WIZO95785 1651 aa19.44■□□□□ 0.7
SNX5-208ENST00000475716 CFTRP13569 1480 aa19.36■□□□□ 0.69
SNX5-208ENST00000475716 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
SNX5-208ENST00000475716 RIMBP3CA6NJZ7 1639 aa19.31■□□□□ 0.68
SNX5-208ENST00000475716 RIMBP3BA6NNM3 1639 aa19.31■□□□□ 0.68
SNX5-208ENST00000475716 RIMBP3Q9UFD9 1639 aa19.31■□□□□ 0.68
SNX5-208ENST00000475716 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
SNX5-208ENST00000475716 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
SNX5-208ENST00000475716 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
SNX5-208ENST00000475716 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
SNX5-208ENST00000475716 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
SNX5-208ENST00000475716 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
SNX5-208ENST00000475716 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
SNX5-208ENST00000475716 FBLN2P98095 1184 aa19.06■□□□□ 0.64
SNX5-208ENST00000475716 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
SNX5-208ENST00000475716 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.643e-7■■■□□ 19.1
SNX5-208ENST00000475716 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.63
SNX5-208ENST00000475716 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
SNX5-208ENST00000475716 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
SNX5-208ENST00000475716 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
SNX5-208ENST00000475716 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
SNX5-208ENST00000475716 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
SNX5-208ENST00000475716 CHD1O14646 1710 aa18.9■□□□□ 0.62
SNX5-208ENST00000475716 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
SNX5-208ENST00000475716 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
SNX5-208ENST00000475716 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
SNX5-208ENST00000475716 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
SNX5-208ENST00000475716 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
SNX5-208ENST00000475716 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
SNX5-208ENST00000475716 SOGA1O94964 1423 aa18.79■□□□□ 0.6
SNX5-208ENST00000475716 SNAPC4Q5SXM2 1469 aa18.74■□□□□ 0.59
SNX5-208ENST00000475716 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
SNX5-208ENST00000475716 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
SNX5-208ENST00000475716 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
SNX5-208ENST00000475716 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
SNX5-208ENST00000475716 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
SNX5-208ENST00000475716 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
SNX5-208ENST00000475716 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
SNX5-208ENST00000475716 CUX1P39880 1505 aa18.55■□□□□ 0.56
SNX5-208ENST00000475716 WDR97A6NE52 1622 aa18.52■□□□□ 0.55
SNX5-208ENST00000475716 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
SNX5-208ENST00000475716 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
SNX5-208ENST00000475716 ABCA10Q8WWZ4 1543 aa18.37■□□□□ 0.53
SNX5-208ENST00000475716 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
SNX5-208ENST00000475716 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
SNX5-208ENST00000475716 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
SNX5-208ENST00000475716 NUP160Q12769 1436 aa18.32■□□□□ 0.52
SNX5-208ENST00000475716 FAM69CQ0P6D2 419 aa18.3■□□□□ 0.52
SNX5-208ENST00000475716 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
SNX5-208ENST00000475716 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
SNX5-208ENST00000475716 KIF13AQ9H1H9 1805 aa18.25■□□□□ 0.51
SNX5-208ENST00000475716 PRG4Q92954 1404 aaPredicted RBP18.24■□□□□ 0.51
SNX5-208ENST00000475716 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
SNX5-208ENST00000475716 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
SNX5-208ENST00000475716 ADAMTS12P58397 1594 aa18.23■□□□□ 0.51
SNX5-208ENST00000475716 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
SNX5-208ENST00000475716 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
SNX5-208ENST00000475716 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms