RNA–Protein interactions for RNA: ENST00000475695.1

CAD-207, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 3

Gene CAD, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-207ENST00000475695 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
CAD-207ENST00000475695 ABCC9O60706 1549 aa37.56■■■■□ 3.6
CAD-207ENST00000475695 CCDC180Q9P1Z9 1646 aa37.47■■■■□ 3.59
CAD-207ENST00000475695 RB1CC1Q8TDY2 1594 aa35.65■■■■□ 3.3
CAD-207ENST00000475695 DNAJC5BQ9UF47 199 aa35.4■■■■□ 3.26
CAD-207ENST00000475695 NACADO15069 1562 aa35.37■■■■□ 3.25
CAD-207ENST00000475695 UNC13AQ9UPW8 1703 aa35.12■■■■□ 3.21
CAD-207ENST00000475695 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
CAD-207ENST00000475695 PABPN1Q86U42 306 aaKnown RBP eCLIP34.91■■■■□ 3.18
CAD-207ENST00000475695 MYO15BQ96JP2 1530 aa34.82■■■■□ 3.16
CAD-207ENST00000475695 BICRAQ9NZM4 1560 aa34.78■■■■□ 3.16
CAD-207ENST00000475695 ZCCHC6Q5VYS8 1495 aaKnown RBP34.52■■■■□ 3.12
CAD-207ENST00000475695 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
CAD-207ENST00000475695 SCRIBQ14160 1630 aa34.16■■■■□ 3.06
CAD-207ENST00000475695 SHROOM4Q9ULL8 1493 aa34.08■■■■□ 3.05
CAD-207ENST00000475695 CC2D2AQ9P2K1 1620 aa33.97■■■■□ 3.03
CAD-207ENST00000475695 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
CAD-207ENST00000475695 CECR2Q9BXF3 1484 aa33.81■■■■□ 3
CAD-207ENST00000475695 NCAPD3P42695 1498 aa32.65■■■□□ 2.82
CAD-207ENST00000475695 ATAD2BQ9ULI0 1458 aa32.57■■■□□ 2.8
CAD-207ENST00000475695 SMARCA4P51532 1647 aa32.57■■■□□ 2.8
CAD-207ENST00000475695 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
CAD-207ENST00000475695 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
CAD-207ENST00000475695 SMARCA2P51531 1590 aa32.43■■■□□ 2.78
CAD-207ENST00000475695 CUX2O14529 1486 aa32.35■■■□□ 2.77
CAD-207ENST00000475695 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
CAD-207ENST00000475695 BAZ1AQ9NRL2 1556 aaPredicted RBP32.3■■■□□ 2.76
CAD-207ENST00000475695 NESP48681 1621 aa32.29■■■□□ 2.76
CAD-207ENST00000475695 PEG3Q9GZU2 1588 aa32.23■■■□□ 2.75
CAD-207ENST00000475695 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
CAD-207ENST00000475695 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
CAD-207ENST00000475695 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
CAD-207ENST00000475695 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
CAD-207ENST00000475695 KIF21AQ7Z4S6 1674 aa31.94■■■□□ 2.7
CAD-207ENST00000475695 WIZO95785 1651 aa31.8■■■□□ 2.68
CAD-207ENST00000475695 PDS5BQ9NTI5 1447 aa31.67■■■□□ 2.66
CAD-207ENST00000475695 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
CAD-207ENST00000475695 MRC2Q9UBG0 1479 aa31.49■■■□□ 2.63
CAD-207ENST00000475695 WDR62O43379 1518 aa31.49■■■□□ 2.63
CAD-207ENST00000475695 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
CAD-207ENST00000475695 CEP164Q9UPV0 1460 aa31.33■■■□□ 2.61
CAD-207ENST00000475695 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
CAD-207ENST00000475695 TOP2AP11388 1531 aaKnown RBP31.3■■■□□ 2.6
CAD-207ENST00000475695 CFTRP13569 1480 aa31.28■■■□□ 2.6
CAD-207ENST00000475695 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.57
CAD-207ENST00000475695 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
CAD-207ENST00000475695 TRIM41Q8WV44 630 aa30.97■■■□□ 2.55
CAD-207ENST00000475695 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
CAD-207ENST00000475695 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
CAD-207ENST00000475695 OSCARQ8IYS5 282 aa30.76■■■□□ 2.51
CAD-207ENST00000475695 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
CAD-207ENST00000475695 IFT140Q96RY7 1462 aa30.69■■■□□ 2.5
CAD-207ENST00000475695 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
CAD-207ENST00000475695 DNMBPQ6XZF7 1577 aa30.61■■■□□ 2.49
CAD-207ENST00000475695 RIMBP3CA6NJZ7 1639 aa30.6■■■□□ 2.49
CAD-207ENST00000475695 RIMBP3BA6NNM3 1639 aa30.6■■■□□ 2.49
CAD-207ENST00000475695 RIMBP3Q9UFD9 1639 aa30.6■■■□□ 2.49
CAD-207ENST00000475695 TARBP1Q13395 1621 aaKnown RBP30.54■■■□□ 2.48
CAD-207ENST00000475695 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
CAD-207ENST00000475695 CHD1O14646 1710 aa30.47■■■□□ 2.47
CAD-207ENST00000475695 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
CAD-207ENST00000475695 AQRO60306 1485 aaKnown RBP eCLIP30.42■■■□□ 2.462e-6■■■□□ 18.1
CAD-207ENST00000475695 POLA1P09884 1462 aaPredicted RBP30.42■■■□□ 2.46
CAD-207ENST00000475695 RAD54L2Q9Y4B4 1467 aa30.33■■■□□ 2.45
CAD-207ENST00000475695 CUX1P39880 1505 aa30.21■■■□□ 2.43
CAD-207ENST00000475695 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
CAD-207ENST00000475695 SOGA1O94964 1423 aa30.19■■■□□ 2.42
CAD-207ENST00000475695 TDRD9Q8NDG6 1382 aaKnown RBP30.18■■■□□ 2.42
CAD-207ENST00000475695 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
CAD-207ENST00000475695 WDR97A6NE52 1622 aa30.13■■■□□ 2.41
CAD-207ENST00000475695 FBLN2P98095 1184 aa30.12■■■□□ 2.41
CAD-207ENST00000475695 SNAPC4Q5SXM2 1469 aa30.12■■■□□ 2.41
CAD-207ENST00000475695 CYB5RLQ6IPT4 315 aa30.11■■■□□ 2.41
CAD-207ENST00000475695 CLASP1Q7Z460 1538 aa30.05■■■□□ 2.4
CAD-207ENST00000475695 PBRM1Q86U86 1689 aa30■■■□□ 2.39
CAD-207ENST00000475695 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
CAD-207ENST00000475695 GRIN2BQ13224 1484 aa29.95■■■□□ 2.39
CAD-207ENST00000475695 SYNJ1O43426 1573 aa29.93■■■□□ 2.38
CAD-207ENST00000475695 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
CAD-207ENST00000475695 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
CAD-207ENST00000475695 CHMP7Q8WUX9 453 aaPredicted RBP29.85■■■□□ 2.37
CAD-207ENST00000475695 GAPVD1Q14C86 1478 aa29.85■■■□□ 2.37
CAD-207ENST00000475695 ABCA10Q8WWZ4 1543 aa29.83■■■□□ 2.37
CAD-207ENST00000475695 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
CAD-207ENST00000475695 TRHP20396 242 aaPredicted RBP29.75■■■□□ 2.35
CAD-207ENST00000475695 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
CAD-207ENST00000475695 TOP2BQ02880 1626 aa29.66■■■□□ 2.34
CAD-207ENST00000475695 ADAMTS12P58397 1594 aa29.65■■■□□ 2.34
CAD-207ENST00000475695 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.34
CAD-207ENST00000475695 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
CAD-207ENST00000475695 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
CAD-207ENST00000475695 WRNQ14191 1432 aaPredicted RBP eCLIP29.6■■■□□ 2.33
CAD-207ENST00000475695 NUP160Q12769 1436 aa29.53■■■□□ 2.32
CAD-207ENST00000475695 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
CAD-207ENST00000475695 ERICH3Q5RHP9 1530 aa29.44■■■□□ 2.3
CAD-207ENST00000475695 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
CAD-207ENST00000475695 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
CAD-207ENST00000475695 KIF13AQ9H1H9 1805 aa29.24■■■□□ 2.27
CAD-207ENST00000475695 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.27
CAD-207ENST00000475695 JPH4Q96JJ6 628 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms