RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
TUBA4A-209ENST00000475683 ABCC9O60706 1549 aa30.27■■■□□ 2.44
TUBA4A-209ENST00000475683 CCDC180Q9P1Z9 1646 aa30.03■■■□□ 2.4
TUBA4A-209ENST00000475683 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
TUBA4A-209ENST00000475683 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
TUBA4A-209ENST00000475683 NACADO15069 1562 aa28.37■■■□□ 2.13
TUBA4A-209ENST00000475683 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
TUBA4A-209ENST00000475683 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
TUBA4A-209ENST00000475683 PABPN1Q86U42 306 aaKnown RBP eCLIP28.11■■■□□ 2.09
TUBA4A-209ENST00000475683 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
TUBA4A-209ENST00000475683 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
TUBA4A-209ENST00000475683 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
TUBA4A-209ENST00000475683 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
TUBA4A-209ENST00000475683 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
TUBA4A-209ENST00000475683 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
TUBA4A-209ENST00000475683 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
TUBA4A-209ENST00000475683 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
TUBA4A-209ENST00000475683 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
TUBA4A-209ENST00000475683 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
TUBA4A-209ENST00000475683 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
TUBA4A-209ENST00000475683 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
TUBA4A-209ENST00000475683 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
TUBA4A-209ENST00000475683 CUX2O14529 1486 aa26.09■■□□□ 1.77
TUBA4A-209ENST00000475683 ERCC6Q03468 1493 aa26.08■■□□□ 1.77
TUBA4A-209ENST00000475683 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
TUBA4A-209ENST00000475683 SMARCA2P51531 1590 aa26■■□□□ 1.75
TUBA4A-209ENST00000475683 NESP48681 1621 aa25.99■■□□□ 1.75
TUBA4A-209ENST00000475683 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
TUBA4A-209ENST00000475683 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
TUBA4A-209ENST00000475683 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
TUBA4A-209ENST00000475683 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
TUBA4A-209ENST00000475683 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
TUBA4A-209ENST00000475683 KIF21AQ7Z4S6 1674 aa25.69■■□□□ 1.7
TUBA4A-209ENST00000475683 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
TUBA4A-209ENST00000475683 WIZO95785 1651 aa25.47■■□□□ 1.67
TUBA4A-209ENST00000475683 PDS5BQ9NTI5 1447 aa25.45■■□□□ 1.66
TUBA4A-209ENST00000475683 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
TUBA4A-209ENST00000475683 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
TUBA4A-209ENST00000475683 WDR62O43379 1518 aa25.29■■□□□ 1.64
TUBA4A-209ENST00000475683 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
TUBA4A-209ENST00000475683 FANCD2Q9BXW9 1451 aa25.13■■□□□ 1.61
TUBA4A-209ENST00000475683 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
TUBA4A-209ENST00000475683 CFTRP13569 1480 aa25.07■■□□□ 1.6
TUBA4A-209ENST00000475683 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
TUBA4A-209ENST00000475683 TOP2AP11388 1531 aaKnown RBP25.03■■□□□ 1.6
TUBA4A-209ENST00000475683 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
TUBA4A-209ENST00000475683 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
TUBA4A-209ENST00000475683 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
TUBA4A-209ENST00000475683 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
TUBA4A-209ENST00000475683 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
TUBA4A-209ENST00000475683 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
TUBA4A-209ENST00000475683 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
TUBA4A-209ENST00000475683 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
TUBA4A-209ENST00000475683 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
TUBA4A-209ENST00000475683 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
TUBA4A-209ENST00000475683 EIF4G3O43432 1585 aaKnown RBP24.6■■□□□ 1.53
TUBA4A-209ENST00000475683 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
TUBA4A-209ENST00000475683 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
TUBA4A-209ENST00000475683 CHD1O14646 1710 aa24.52■■□□□ 1.52
TUBA4A-209ENST00000475683 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
TUBA4A-209ENST00000475683 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
TUBA4A-209ENST00000475683 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
TUBA4A-209ENST00000475683 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
TUBA4A-209ENST00000475683 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
TUBA4A-209ENST00000475683 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
TUBA4A-209ENST00000475683 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
TUBA4A-209ENST00000475683 FBLN2P98095 1184 aa24.26■■□□□ 1.47
TUBA4A-209ENST00000475683 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
TUBA4A-209ENST00000475683 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
TUBA4A-209ENST00000475683 SOGA1O94964 1423 aa24.21■■□□□ 1.47
TUBA4A-209ENST00000475683 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
TUBA4A-209ENST00000475683 CUX1P39880 1505 aa24.19■■□□□ 1.46
TUBA4A-209ENST00000475683 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
TUBA4A-209ENST00000475683 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
TUBA4A-209ENST00000475683 TRHP20396 242 aaPredicted RBP24.08■■□□□ 1.45
TUBA4A-209ENST00000475683 PBRM1Q86U86 1689 aa24.08■■□□□ 1.44
TUBA4A-209ENST00000475683 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
TUBA4A-209ENST00000475683 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
TUBA4A-209ENST00000475683 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
TUBA4A-209ENST00000475683 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
TUBA4A-209ENST00000475683 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
TUBA4A-209ENST00000475683 SYNJ2O15056 1496 aa24■■□□□ 1.43
TUBA4A-209ENST00000475683 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
TUBA4A-209ENST00000475683 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
TUBA4A-209ENST00000475683 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
TUBA4A-209ENST00000475683 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
TUBA4A-209ENST00000475683 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
TUBA4A-209ENST00000475683 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
TUBA4A-209ENST00000475683 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
TUBA4A-209ENST00000475683 BIVM-ERCC5R4GMW8 1640 aa23.75■■□□□ 1.39
TUBA4A-209ENST00000475683 TOP2BQ02880 1626 aa23.72■■□□□ 1.39
TUBA4A-209ENST00000475683 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
TUBA4A-209ENST00000475683 NUP160Q12769 1436 aa23.67■■□□□ 1.38
TUBA4A-209ENST00000475683 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
TUBA4A-209ENST00000475683 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
TUBA4A-209ENST00000475683 ERICH3Q5RHP9 1530 aa23.57■■□□□ 1.36
TUBA4A-209ENST00000475683 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
TUBA4A-209ENST00000475683 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
TUBA4A-209ENST00000475683 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
TUBA4A-209ENST00000475683 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms