RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 NISCHQ9Y2I1 1504 aa31.33■■■□□ 2.61
CCDC57-208ENST00000475635 ABCC9O60706 1549 aa28.23■■■□□ 2.11
CCDC57-208ENST00000475635 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
CCDC57-208ENST00000475635 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
CCDC57-208ENST00000475635 NACADO15069 1562 aa26.65■■□□□ 1.86
CCDC57-208ENST00000475635 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
CCDC57-208ENST00000475635 DCAF8L2P0C7V8 631 aa26.45■■□□□ 1.82
CCDC57-208ENST00000475635 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
CCDC57-208ENST00000475635 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
CCDC57-208ENST00000475635 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
CCDC57-208ENST00000475635 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
CCDC57-208ENST00000475635 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
CCDC57-208ENST00000475635 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
CCDC57-208ENST00000475635 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
CCDC57-208ENST00000475635 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
CCDC57-208ENST00000475635 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
CCDC57-208ENST00000475635 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
CCDC57-208ENST00000475635 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
CCDC57-208ENST00000475635 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
CCDC57-208ENST00000475635 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
CCDC57-208ENST00000475635 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
CCDC57-208ENST00000475635 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
CCDC57-208ENST00000475635 HMGXB3Q12766 1538 aa24.41■■□□□ 1.5
CCDC57-208ENST00000475635 DNAJC5Q9H3Z4 198 aa24.41■■□□□ 1.5
CCDC57-208ENST00000475635 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
CCDC57-208ENST00000475635 CUX2O14529 1486 aa24.37■■□□□ 1.49
CCDC57-208ENST00000475635 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.49
CCDC57-208ENST00000475635 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
CCDC57-208ENST00000475635 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
CCDC57-208ENST00000475635 NESP48681 1621 aa24.24■■□□□ 1.47
CCDC57-208ENST00000475635 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
CCDC57-208ENST00000475635 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
CCDC57-208ENST00000475635 THOC2Q8NI27 1593 aaKnown RBP24.05■■□□□ 1.44
CCDC57-208ENST00000475635 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
CCDC57-208ENST00000475635 WIZO95785 1651 aa23.9■■□□□ 1.42
CCDC57-208ENST00000475635 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
CCDC57-208ENST00000475635 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
CCDC57-208ENST00000475635 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
CCDC57-208ENST00000475635 WDR62O43379 1518 aa23.68■■□□□ 1.38
CCDC57-208ENST00000475635 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
CCDC57-208ENST00000475635 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
CCDC57-208ENST00000475635 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
CCDC57-208ENST00000475635 TOP2AP11388 1531 aaKnown RBP23.55■■□□□ 1.36
CCDC57-208ENST00000475635 CFTRP13569 1480 aa23.54■■□□□ 1.36
CCDC57-208ENST00000475635 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
CCDC57-208ENST00000475635 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
CCDC57-208ENST00000475635 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
CCDC57-208ENST00000475635 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
CCDC57-208ENST00000475635 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
CCDC57-208ENST00000475635 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
CCDC57-208ENST00000475635 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
CCDC57-208ENST00000475635 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
CCDC57-208ENST00000475635 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
CCDC57-208ENST00000475635 DNMBPQ6XZF7 1577 aa23.05■■□□□ 1.28
CCDC57-208ENST00000475635 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
CCDC57-208ENST00000475635 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
CCDC57-208ENST00000475635 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
CCDC57-208ENST00000475635 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
CCDC57-208ENST00000475635 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
CCDC57-208ENST00000475635 CHD1O14646 1710 aa22.93■■□□□ 1.26
CCDC57-208ENST00000475635 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
CCDC57-208ENST00000475635 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.25
CCDC57-208ENST00000475635 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
CCDC57-208ENST00000475635 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
CCDC57-208ENST00000475635 SOGA1O94964 1423 aa22.74■■□□□ 1.23
CCDC57-208ENST00000475635 FBLN2P98095 1184 aa22.73■■□□□ 1.23
CCDC57-208ENST00000475635 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
CCDC57-208ENST00000475635 TDRD9Q8NDG6 1382 aaKnown RBP22.71■■□□□ 1.23
CCDC57-208ENST00000475635 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
CCDC57-208ENST00000475635 CUX1P39880 1505 aa22.7■■□□□ 1.22
CCDC57-208ENST00000475635 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
CCDC57-208ENST00000475635 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
CCDC57-208ENST00000475635 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
CCDC57-208ENST00000475635 MAGI1Q96QZ7 1491 aaPredicted RBP22.59■■□□□ 1.21
CCDC57-208ENST00000475635 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
CCDC57-208ENST00000475635 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
CCDC57-208ENST00000475635 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
CCDC57-208ENST00000475635 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
CCDC57-208ENST00000475635 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
CCDC57-208ENST00000475635 SYNJ2O15056 1496 aa22.51■■□□□ 1.19
CCDC57-208ENST00000475635 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
CCDC57-208ENST00000475635 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
CCDC57-208ENST00000475635 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
CCDC57-208ENST00000475635 TRHP20396 242 aaPredicted RBP22.46■■□□□ 1.19
CCDC57-208ENST00000475635 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
CCDC57-208ENST00000475635 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
CCDC57-208ENST00000475635 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
CCDC57-208ENST00000475635 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
CCDC57-208ENST00000475635 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
CCDC57-208ENST00000475635 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
CCDC57-208ENST00000475635 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
CCDC57-208ENST00000475635 ERCC6L2Q5T890 1561 aa22.23■■□□□ 1.15
CCDC57-208ENST00000475635 NUP160Q12769 1436 aa22.21■■□□□ 1.15
CCDC57-208ENST00000475635 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
CCDC57-208ENST00000475635 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
CCDC57-208ENST00000475635 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
CCDC57-208ENST00000475635 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
CCDC57-208ENST00000475635 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
CCDC57-208ENST00000475635 KIF13AQ9H1H9 1805 aa21.99■■□□□ 1.11
CCDC57-208ENST00000475635 JPH4Q96JJ6 628 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms