RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 NISCHQ9Y2I1 1504 aa40.74■■■■■ 4.11
VPS8-222ENST00000475580 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
VPS8-222ENST00000475580 ABCC9O60706 1549 aa35.67■■■■□ 3.3
VPS8-222ENST00000475580 RB1CC1Q8TDY2 1594 aa34.22■■■■□ 3.07
VPS8-222ENST00000475580 NACADO15069 1562 aa34.15■■■■□ 3.06
VPS8-222ENST00000475580 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
VPS8-222ENST00000475580 ZCCHC6Q5VYS8 1495 aaKnown RBP33.91■■■■□ 3.02
VPS8-222ENST00000475580 MYO15BQ96JP2 1530 aa33.9■■■■□ 3.02
VPS8-222ENST00000475580 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
VPS8-222ENST00000475580 UNC13AQ9UPW8 1703 aa33.52■■■□□ 2.96
VPS8-222ENST00000475580 PABPN1Q86U42 306 aaKnown RBP eCLIP33.29■■■□□ 2.92
VPS8-222ENST00000475580 BICRAQ9NZM4 1560 aa33.27■■■□□ 2.92
VPS8-222ENST00000475580 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
VPS8-222ENST00000475580 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
VPS8-222ENST00000475580 SHROOM4Q9ULL8 1493 aa32.84■■■□□ 2.85
VPS8-222ENST00000475580 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
VPS8-222ENST00000475580 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
VPS8-222ENST00000475580 CECR2Q9BXF3 1484 aa32.06■■■□□ 2.72
VPS8-222ENST00000475580 SMARCA4P51532 1647 aa31.65■■■□□ 2.66
VPS8-222ENST00000475580 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
VPS8-222ENST00000475580 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
VPS8-222ENST00000475580 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
VPS8-222ENST00000475580 SMARCA2P51531 1590 aa31.44■■■□□ 2.62
VPS8-222ENST00000475580 MROH2BQ7Z745 1585 aa31.41■■■□□ 2.62
VPS8-222ENST00000475580 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
VPS8-222ENST00000475580 HMGXB3Q12766 1538 aa31.35■■■□□ 2.61
VPS8-222ENST00000475580 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
VPS8-222ENST00000475580 WIZO95785 1651 aa31.06■■■□□ 2.56
VPS8-222ENST00000475580 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
VPS8-222ENST00000475580 NESP48681 1621 aa30.84■■■□□ 2.53
VPS8-222ENST00000475580 ERCC6Q03468 1493 aa30.71■■■□□ 2.51
VPS8-222ENST00000475580 TOP2AP11388 1531 aaKnown RBP30.71■■■□□ 2.51
VPS8-222ENST00000475580 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
VPS8-222ENST00000475580 CADPSQ9ULU8 1353 aa30.57■■■□□ 2.48
VPS8-222ENST00000475580 CUX2O14529 1486 aa30.49■■■□□ 2.47
VPS8-222ENST00000475580 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
VPS8-222ENST00000475580 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
VPS8-222ENST00000475580 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
VPS8-222ENST00000475580 CFTRP13569 1480 aa30.38■■■□□ 2.45
VPS8-222ENST00000475580 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
VPS8-222ENST00000475580 FANCD2Q9BXW9 1451 aa30.23■■■□□ 2.43
VPS8-222ENST00000475580 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.43
VPS8-222ENST00000475580 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
VPS8-222ENST00000475580 PRDM2Q13029 1718 aa30.15■■■□□ 2.42
VPS8-222ENST00000475580 WDR62O43379 1518 aa30.14■■■□□ 2.42
VPS8-222ENST00000475580 URB2Q14146 1524 aaKnown RBP29.98■■■□□ 2.39
VPS8-222ENST00000475580 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
VPS8-222ENST00000475580 DNAJC5Q9H3Z4 198 aa29.76■■■□□ 2.35
VPS8-222ENST00000475580 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
VPS8-222ENST00000475580 DNMBPQ6XZF7 1577 aa29.69■■■□□ 2.34
VPS8-222ENST00000475580 ABCC8Q09428 1581 aa29.68■■■□□ 2.34
VPS8-222ENST00000475580 IFT140Q96RY7 1462 aa29.58■■■□□ 2.33
VPS8-222ENST00000475580 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
VPS8-222ENST00000475580 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
VPS8-222ENST00000475580 CUX1P39880 1505 aa29.47■■■□□ 2.31
VPS8-222ENST00000475580 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
VPS8-222ENST00000475580 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
VPS8-222ENST00000475580 EIF4G3O43432 1585 aaKnown RBP29.37■■■□□ 2.29
VPS8-222ENST00000475580 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
VPS8-222ENST00000475580 SOGA1O94964 1423 aa29.32■■■□□ 2.28
VPS8-222ENST00000475580 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
VPS8-222ENST00000475580 WDR97A6NE52 1622 aa29.2■■■□□ 2.26
VPS8-222ENST00000475580 TDRD9Q8NDG6 1382 aaKnown RBP29.19■■■□□ 2.26
VPS8-222ENST00000475580 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
VPS8-222ENST00000475580 BIVM-ERCC5R4GMW8 1640 aa29.17■■■□□ 2.26
VPS8-222ENST00000475580 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
VPS8-222ENST00000475580 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
VPS8-222ENST00000475580 OSCARQ8IYS5 282 aa29.15■■■□□ 2.26
VPS8-222ENST00000475580 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
VPS8-222ENST00000475580 CHD1O14646 1710 aa29.04■■■□□ 2.24
VPS8-222ENST00000475580 SNAPC4Q5SXM2 1469 aa29.02■■■□□ 2.24
VPS8-222ENST00000475580 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
VPS8-222ENST00000475580 GRIN2BQ13224 1484 aa29.01■■■□□ 2.23
VPS8-222ENST00000475580 GAPVD1Q14C86 1478 aa28.98■■■□□ 2.23
VPS8-222ENST00000475580 PBRM1Q86U86 1689 aa28.97■■■□□ 2.23
VPS8-222ENST00000475580 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
VPS8-222ENST00000475580 FBLN2P98095 1184 aa28.89■■■□□ 2.22
VPS8-222ENST00000475580 SYNJ2O15056 1496 aa28.85■■■□□ 2.21
VPS8-222ENST00000475580 CHMP7Q8WUX9 453 aaPredicted RBP28.8■■■□□ 2.2
VPS8-222ENST00000475580 RIMBP3CA6NJZ7 1639 aa28.78■■■□□ 2.2
VPS8-222ENST00000475580 RIMBP3BA6NNM3 1639 aa28.78■■■□□ 2.2
VPS8-222ENST00000475580 RIMBP3Q9UFD9 1639 aa28.78■■■□□ 2.2
VPS8-222ENST00000475580 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
VPS8-222ENST00000475580 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
VPS8-222ENST00000475580 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
VPS8-222ENST00000475580 ERICH3Q5RHP9 1530 aa28.73■■■□□ 2.19
VPS8-222ENST00000475580 TRIM41Q8WV44 630 aa28.66■■■□□ 2.18
VPS8-222ENST00000475580 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
VPS8-222ENST00000475580 GRIN2AQ12879 1464 aa28.65■■■□□ 2.18
VPS8-222ENST00000475580 CEP170Q5SW79 1584 aa28.55■■■□□ 2.16
VPS8-222ENST00000475580 NUP160Q12769 1436 aa28.55■■■□□ 2.16
VPS8-222ENST00000475580 KIF27Q86VH2 1401 aa28.55■■■□□ 2.16
VPS8-222ENST00000475580 ARAP1Q96P48 1450 aa28.52■■■□□ 2.16
VPS8-222ENST00000475580 IGF1RP08069 1367 aa28.5■■■□□ 2.15
VPS8-222ENST00000475580 CUL7Q14999 1698 aa28.42■■■□□ 2.14
VPS8-222ENST00000475580 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
VPS8-222ENST00000475580 SHROOM2Q13796 1616 aa28.38■■■□□ 2.13
VPS8-222ENST00000475580 ERCC6L2Q5T890 1561 aa28.34■■■□□ 2.13
VPS8-222ENST00000475580 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
VPS8-222ENST00000475580 CARMIL1Q5VZK9 1371 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms