RNA–Protein interactions for RNA: ENST00000475566.3

RN7SL448P-201, Transcript of RNA, 7SL, cytoplasmic 448, pseudogene, humanhuman

BASIC

Gene RN7SL448P, Length 295 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL448P-201ENST00000475566 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
RN7SL448P-201ENST00000475566 CCDC180Q9P1Z9 1646 aa19.23■□□□□ 0.67
RN7SL448P-201ENST00000475566 ABCC9O60706 1549 aa19.11■□□□□ 0.65
RN7SL448P-201ENST00000475566 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
RN7SL448P-201ENST00000475566 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
RN7SL448P-201ENST00000475566 NACADO15069 1562 aa18.12■□□□□ 0.49
RN7SL448P-201ENST00000475566 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
RN7SL448P-201ENST00000475566 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
RN7SL448P-201ENST00000475566 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
RN7SL448P-201ENST00000475566 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
RN7SL448P-201ENST00000475566 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
RN7SL448P-201ENST00000475566 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
RN7SL448P-201ENST00000475566 BICRAQ9NZM4 1560 aa17.68■□□□□ 0.42
RN7SL448P-201ENST00000475566 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
RN7SL448P-201ENST00000475566 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
RN7SL448P-201ENST00000475566 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
RN7SL448P-201ENST00000475566 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
RN7SL448P-201ENST00000475566 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
RN7SL448P-201ENST00000475566 SMARCA4P51532 1647 aa16.77■□□□□ 0.27
RN7SL448P-201ENST00000475566 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
RN7SL448P-201ENST00000475566 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
RN7SL448P-201ENST00000475566 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
RN7SL448P-201ENST00000475566 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
RN7SL448P-201ENST00000475566 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
RN7SL448P-201ENST00000475566 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
RN7SL448P-201ENST00000475566 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
RN7SL448P-201ENST00000475566 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
RN7SL448P-201ENST00000475566 ERCC6Q03468 1493 aa16.49■□□□□ 0.23
RN7SL448P-201ENST00000475566 NESP48681 1621 aa16.46■□□□□ 0.23
RN7SL448P-201ENST00000475566 WIZO95785 1651 aa16.43■□□□□ 0.22
RN7SL448P-201ENST00000475566 CUX2O14529 1486 aa16.34■□□□□ 0.21
RN7SL448P-201ENST00000475566 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
RN7SL448P-201ENST00000475566 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
RN7SL448P-201ENST00000475566 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
RN7SL448P-201ENST00000475566 THOC2Q8NI27 1593 aaKnown RBP16.26■□□□□ 0.19
RN7SL448P-201ENST00000475566 PDS5BQ9NTI5 1447 aa16.22■□□□□ 0.19
RN7SL448P-201ENST00000475566 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
RN7SL448P-201ENST00000475566 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
RN7SL448P-201ENST00000475566 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
RN7SL448P-201ENST00000475566 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
RN7SL448P-201ENST00000475566 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
RN7SL448P-201ENST00000475566 CFTRP13569 1480 aa16.08■□□□□ 0.16
RN7SL448P-201ENST00000475566 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
RN7SL448P-201ENST00000475566 WDR62O43379 1518 aa16.04■□□□□ 0.16
RN7SL448P-201ENST00000475566 CCDC88BA6NC98 1476 aa16.01■□□□□ 0.15
RN7SL448P-201ENST00000475566 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
RN7SL448P-201ENST00000475566 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
RN7SL448P-201ENST00000475566 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
RN7SL448P-201ENST00000475566 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
RN7SL448P-201ENST00000475566 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
RN7SL448P-201ENST00000475566 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
RN7SL448P-201ENST00000475566 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
RN7SL448P-201ENST00000475566 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
RN7SL448P-201ENST00000475566 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
RN7SL448P-201ENST00000475566 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
RN7SL448P-201ENST00000475566 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
RN7SL448P-201ENST00000475566 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
RN7SL448P-201ENST00000475566 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
RN7SL448P-201ENST00000475566 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
RN7SL448P-201ENST00000475566 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
RN7SL448P-201ENST00000475566 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
RN7SL448P-201ENST00000475566 CUX1P39880 1505 aa15.58■□□□□ 0.08
RN7SL448P-201ENST00000475566 SOGA1O94964 1423 aa15.55■□□□□ 0.08
RN7SL448P-201ENST00000475566 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
RN7SL448P-201ENST00000475566 CHD1O14646 1710 aa15.51■□□□□ 0.07
RN7SL448P-201ENST00000475566 FBLN2P98095 1184 aa15.49■□□□□ 0.07
RN7SL448P-201ENST00000475566 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
RN7SL448P-201ENST00000475566 RIMBP3CA6NJZ7 1639 aa15.45■□□□□ 0.06
RN7SL448P-201ENST00000475566 RIMBP3BA6NNM3 1639 aa15.45■□□□□ 0.06
RN7SL448P-201ENST00000475566 RIMBP3Q9UFD9 1639 aa15.45■□□□□ 0.06
RN7SL448P-201ENST00000475566 SNAPC4Q5SXM2 1469 aa15.45■□□□□ 0.06
RN7SL448P-201ENST00000475566 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
RN7SL448P-201ENST00000475566 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
RN7SL448P-201ENST00000475566 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
RN7SL448P-201ENST00000475566 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
RN7SL448P-201ENST00000475566 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
RN7SL448P-201ENST00000475566 BIVM-ERCC5R4GMW8 1640 aa15.38■□□□□ 0.05
RN7SL448P-201ENST00000475566 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
RN7SL448P-201ENST00000475566 MAGI1Q96QZ7 1491 aaPredicted RBP15.38■□□□□ 0.05
RN7SL448P-201ENST00000475566 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
RN7SL448P-201ENST00000475566 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
RN7SL448P-201ENST00000475566 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
RN7SL448P-201ENST00000475566 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
RN7SL448P-201ENST00000475566 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
RN7SL448P-201ENST00000475566 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
RN7SL448P-201ENST00000475566 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
RN7SL448P-201ENST00000475566 ARAP1Q96P48 1450 aa15.27■□□□□ 0.03
RN7SL448P-201ENST00000475566 ADAMTS12P58397 1594 aa15.25■□□□□ 0.03
RN7SL448P-201ENST00000475566 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
RN7SL448P-201ENST00000475566 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
RN7SL448P-201ENST00000475566 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
RN7SL448P-201ENST00000475566 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
RN7SL448P-201ENST00000475566 NUP160Q12769 1436 aa15.13■□□□□ 0.01
RN7SL448P-201ENST00000475566 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
RN7SL448P-201ENST00000475566 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
RN7SL448P-201ENST00000475566 KIF27Q86VH2 1401 aa15.07■□□□□ 0
RN7SL448P-201ENST00000475566 SHROOM2Q13796 1616 aa15.06■□□□□ 0
RN7SL448P-201ENST00000475566 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
RN7SL448P-201ENST00000475566 CUL7Q14999 1698 aa15.03■□□□□ -0
RN7SL448P-201ENST00000475566 IGF1RP08069 1367 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms