RNA–Protein interactions for RNA: ENST00000475475.1

REEP1-204, Transcript of receptor accessory protein 1, humanhuman

TSL 4

Gene REEP1, Length 465 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP1-204ENST00000475475 NISCHQ9Y2I1 1504 aa46.03■■■■■ 4.96
REEP1-204ENST00000475475 CCDC180Q9P1Z9 1646 aa41■■■■■ 4.15
REEP1-204ENST00000475475 ABCC9O60706 1549 aa40.56■■■■■ 4.08
REEP1-204ENST00000475475 RB1CC1Q8TDY2 1594 aa38.81■■■■□ 3.8
REEP1-204ENST00000475475 NACADO15069 1562 aa38.68■■■■□ 3.78
REEP1-204ENST00000475475 DCAF8L2P0C7V8 631 aa38.67■■■■□ 3.78
REEP1-204ENST00000475475 MYO15BQ96JP2 1530 aa38.33■■■■□ 3.73
REEP1-204ENST00000475475 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.72
REEP1-204ENST00000475475 DCAF1Q9Y4B6 1507 aa38.04■■■■□ 3.68
REEP1-204ENST00000475475 PABPN1Q86U42 306 aaKnown RBP eCLIP37.89■■■■□ 3.66
REEP1-204ENST00000475475 UNC13AQ9UPW8 1703 aa37.84■■■■□ 3.65
REEP1-204ENST00000475475 BICRAQ9NZM4 1560 aa37.66■■■■□ 3.62
REEP1-204ENST00000475475 DNAJC5BQ9UF47 199 aa37.61■■■■□ 3.61
REEP1-204ENST00000475475 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
REEP1-204ENST00000475475 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
REEP1-204ENST00000475475 EIF4G1Q04637 1599 aaKnown RBP36.7■■■■□ 3.46
REEP1-204ENST00000475475 CC2D2AQ9P2K1 1620 aa36.63■■■■□ 3.45
REEP1-204ENST00000475475 CECR2Q9BXF3 1484 aa36.49■■■■□ 3.43
REEP1-204ENST00000475475 SMARCA4P51532 1647 aa35.75■■■■□ 3.31
REEP1-204ENST00000475475 NCAPD3P42695 1498 aa35.73■■■■□ 3.31
REEP1-204ENST00000475475 ATAD2BQ9ULI0 1458 aa35.7■■■■□ 3.31
REEP1-204ENST00000475475 BAZ1AQ9NRL2 1556 aaPredicted RBP35.68■■■■□ 3.3
REEP1-204ENST00000475475 SMARCA2P51531 1590 aa35.6■■■■□ 3.29
REEP1-204ENST00000475475 HMGXB3Q12766 1538 aa35.48■■■■□ 3.27
REEP1-204ENST00000475475 MROH2BQ7Z745 1585 aa35.47■■■■□ 3.27
REEP1-204ENST00000475475 PEG3Q9GZU2 1588 aa35.42■■■■□ 3.26
REEP1-204ENST00000475475 BAZ1BQ9UIG0 1483 aaKnown RBP35.37■■■■□ 3.25
REEP1-204ENST00000475475 WIZO95785 1651 aa35.04■■■■□ 3.2
REEP1-204ENST00000475475 NESP48681 1621 aa34.99■■■■□ 3.19
REEP1-204ENST00000475475 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
REEP1-204ENST00000475475 RSF1Q96T23 1441 aaPredicted RBP34.96■■■■□ 3.19
REEP1-204ENST00000475475 LAMC3Q9Y6N6 1575 aa34.8■■■■□ 3.16
REEP1-204ENST00000475475 CUX2O14529 1486 aa34.72■■■■□ 3.15
REEP1-204ENST00000475475 CADPSQ9ULU8 1353 aa34.69■■■■□ 3.14
REEP1-204ENST00000475475 TOP2AP11388 1531 aaKnown RBP34.65■■■■□ 3.14
REEP1-204ENST00000475475 PDS5BQ9NTI5 1447 aa34.63■■■■□ 3.13
REEP1-204ENST00000475475 KIF21AQ7Z4S6 1674 aa34.49■■■■□ 3.11
REEP1-204ENST00000475475 THOC2Q8NI27 1593 aaKnown RBP34.49■■■■□ 3.11
REEP1-204ENST00000475475 CFTRP13569 1480 aa34.39■■■■□ 3.1
REEP1-204ENST00000475475 CCDC88BA6NC98 1476 aa34.28■■■■□ 3.08
REEP1-204ENST00000475475 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
REEP1-204ENST00000475475 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
REEP1-204ENST00000475475 CEP164Q9UPV0 1460 aa34.25■■■■□ 3.07
REEP1-204ENST00000475475 WDR62O43379 1518 aa34.16■■■■□ 3.06
REEP1-204ENST00000475475 DNAJC5Q9H3Z4 198 aa34.14■■■■□ 3.06
REEP1-204ENST00000475475 PRDM2Q13029 1718 aa33.96■■■■□ 3.03
REEP1-204ENST00000475475 URB2Q14146 1524 aaKnown RBP33.95■■■■□ 3.03
REEP1-204ENST00000475475 SUPT5HO00267 1087 aaKnown RBP33.84■■■■□ 3.01
REEP1-204ENST00000475475 TOPBP1Q92547 1522 aa33.68■■■□□ 2.98
REEP1-204ENST00000475475 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
REEP1-204ENST00000475475 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
REEP1-204ENST00000475475 IFT140Q96RY7 1462 aa33.56■■■□□ 2.96
REEP1-204ENST00000475475 ZNF608Q9ULD9 1512 aaPredicted RBP33.46■■■□□ 2.95
REEP1-204ENST00000475475 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
REEP1-204ENST00000475475 TARBP1Q13395 1621 aaKnown RBP33.31■■■□□ 2.92
REEP1-204ENST00000475475 CUX1P39880 1505 aa33.28■■■□□ 2.92
REEP1-204ENST00000475475 OSCARQ8IYS5 282 aa33.28■■■□□ 2.92
REEP1-204ENST00000475475 EIF4G3O43432 1585 aaKnown RBP33.26■■■□□ 2.91
REEP1-204ENST00000475475 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
REEP1-204ENST00000475475 SOGA1O94964 1423 aa33.25■■■□□ 2.91
REEP1-204ENST00000475475 AQRO60306 1485 aaKnown RBP eCLIP33.24■■■□□ 2.91
REEP1-204ENST00000475475 FGD5Q6ZNL6 1462 aa33.24■■■□□ 2.91
REEP1-204ENST00000475475 TDRD9Q8NDG6 1382 aaKnown RBP33.12■■■□□ 2.89
REEP1-204ENST00000475475 WDR97A6NE52 1622 aa33■■■□□ 2.87
REEP1-204ENST00000475475 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
REEP1-204ENST00000475475 FBLN2P98095 1184 aa32.93■■■□□ 2.86
REEP1-204ENST00000475475 ABCA10Q8WWZ4 1543 aa32.9■■■□□ 2.86
REEP1-204ENST00000475475 GRIN2BQ13224 1484 aa32.89■■■□□ 2.86
REEP1-204ENST00000475475 SNAPC4Q5SXM2 1469 aa32.89■■■□□ 2.86
REEP1-204ENST00000475475 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
REEP1-204ENST00000475475 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
REEP1-204ENST00000475475 CHD1O14646 1710 aa32.87■■■□□ 2.85
REEP1-204ENST00000475475 TRIM41Q8WV44 630 aa32.86■■■□□ 2.85
REEP1-204ENST00000475475 BIVM-ERCC5R4GMW8 1640 aa32.86■■■□□ 2.85
REEP1-204ENST00000475475 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
REEP1-204ENST00000475475 MAGI1Q96QZ7 1491 aaPredicted RBP32.82■■■□□ 2.84
REEP1-204ENST00000475475 CHMP7Q8WUX9 453 aaPredicted RBP32.77■■■□□ 2.84
REEP1-204ENST00000475475 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
REEP1-204ENST00000475475 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
REEP1-204ENST00000475475 RIMBP3CA6NJZ7 1639 aa32.71■■■□□ 2.83
REEP1-204ENST00000475475 RIMBP3BA6NNM3 1639 aa32.71■■■□□ 2.83
REEP1-204ENST00000475475 RIMBP3Q9UFD9 1639 aa32.71■■■□□ 2.83
REEP1-204ENST00000475475 SYNJ2O15056 1496 aa32.71■■■□□ 2.83
REEP1-204ENST00000475475 ARHGEF11O15085 1522 aa32.69■■■□□ 2.82
REEP1-204ENST00000475475 CLASP1Q7Z460 1538 aa32.56■■■□□ 2.8
REEP1-204ENST00000475475 ERICH3Q5RHP9 1530 aa32.48■■■□□ 2.79
REEP1-204ENST00000475475 ADAMTS12P58397 1594 aa32.48■■■□□ 2.79
REEP1-204ENST00000475475 FHAD1B1AJZ9 1412 aa32.46■■■□□ 2.79
REEP1-204ENST00000475475 CYB5RLQ6IPT4 315 aa32.46■■■□□ 2.79
REEP1-204ENST00000475475 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
REEP1-204ENST00000475475 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
REEP1-204ENST00000475475 NUP160Q12769 1436 aa32.34■■■□□ 2.77
REEP1-204ENST00000475475 CEP170Q5SW79 1584 aa32.3■■■□□ 2.76
REEP1-204ENST00000475475 KIF27Q86VH2 1401 aa32.3■■■□□ 2.76
REEP1-204ENST00000475475 IGF1RP08069 1367 aa32.24■■■□□ 2.75
REEP1-204ENST00000475475 ERCC6L2Q5T890 1561 aa32.11■■■□□ 2.73
REEP1-204ENST00000475475 SHROOM2Q13796 1616 aa32.09■■■□□ 2.73
REEP1-204ENST00000475475 CUL7Q14999 1698 aa32.08■■■□□ 2.73
REEP1-204ENST00000475475 JPH4Q96JJ6 628 aa32.04■■■□□ 2.72
REEP1-204ENST00000475475 CARMIL1Q5VZK9 1371 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms