RNA–Protein interactions for RNA: ENST00000475443.1

DPCD-205, Transcript of deleted in primary ciliary dyskinesia homolog (mouse), humanhuman

TSL 3

Gene DPCD, Length 731 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPCD-205ENST00000475443 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
DPCD-205ENST00000475443 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
DPCD-205ENST00000475443 ABCC9O60706 1549 aa24.86■■□□□ 1.57
DPCD-205ENST00000475443 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
DPCD-205ENST00000475443 NACADO15069 1562 aa23.65■■□□□ 1.38
DPCD-205ENST00000475443 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
DPCD-205ENST00000475443 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
DPCD-205ENST00000475443 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
DPCD-205ENST00000475443 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
DPCD-205ENST00000475443 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
DPCD-205ENST00000475443 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
DPCD-205ENST00000475443 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
DPCD-205ENST00000475443 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
DPCD-205ENST00000475443 SHROOM4Q9ULL8 1493 aa22.81■■□□□ 1.24
DPCD-205ENST00000475443 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
DPCD-205ENST00000475443 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
DPCD-205ENST00000475443 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
DPCD-205ENST00000475443 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
DPCD-205ENST00000475443 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
DPCD-205ENST00000475443 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.07
DPCD-205ENST00000475443 SMARCA4P51532 1647 aa21.77■■□□□ 1.07
DPCD-205ENST00000475443 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
DPCD-205ENST00000475443 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
DPCD-205ENST00000475443 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
DPCD-205ENST00000475443 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
DPCD-205ENST00000475443 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
DPCD-205ENST00000475443 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
DPCD-205ENST00000475443 ERCC6Q03468 1493 aa21.45■■□□□ 1.03
DPCD-205ENST00000475443 CUX2O14529 1486 aa21.43■■□□□ 1.02
DPCD-205ENST00000475443 NESP48681 1621 aa21.4■■□□□ 1.02
DPCD-205ENST00000475443 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
DPCD-205ENST00000475443 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
DPCD-205ENST00000475443 WIZO95785 1651 aa21.26■□□□□ 0.99
DPCD-205ENST00000475443 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
DPCD-205ENST00000475443 PDS5BQ9NTI5 1447 aa21.18■□□□□ 0.98
DPCD-205ENST00000475443 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
DPCD-205ENST00000475443 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
DPCD-205ENST00000475443 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
DPCD-205ENST00000475443 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
DPCD-205ENST00000475443 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
DPCD-205ENST00000475443 CFTRP13569 1480 aa20.95■□□□□ 0.94
DPCD-205ENST00000475443 WDR62O43379 1518 aa20.94■□□□□ 0.94
DPCD-205ENST00000475443 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
DPCD-205ENST00000475443 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
DPCD-205ENST00000475443 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
DPCD-205ENST00000475443 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
DPCD-205ENST00000475443 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
DPCD-205ENST00000475443 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
DPCD-205ENST00000475443 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
DPCD-205ENST00000475443 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
DPCD-205ENST00000475443 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
DPCD-205ENST00000475443 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
DPCD-205ENST00000475443 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
DPCD-205ENST00000475443 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
DPCD-205ENST00000475443 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
DPCD-205ENST00000475443 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
DPCD-205ENST00000475443 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
DPCD-205ENST00000475443 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.848e-6■■■■□ 23.2
DPCD-205ENST00000475443 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
DPCD-205ENST00000475443 SOGA1O94964 1423 aa20.22■□□□□ 0.83
DPCD-205ENST00000475443 CUX1P39880 1505 aa20.22■□□□□ 0.83
DPCD-205ENST00000475443 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
DPCD-205ENST00000475443 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
DPCD-205ENST00000475443 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
DPCD-205ENST00000475443 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
DPCD-205ENST00000475443 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
DPCD-205ENST00000475443 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
DPCD-205ENST00000475443 CHD1O14646 1710 aa20.17■□□□□ 0.82
DPCD-205ENST00000475443 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
DPCD-205ENST00000475443 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
DPCD-205ENST00000475443 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
DPCD-205ENST00000475443 FBLN2P98095 1184 aa20.06■□□□□ 0.8
DPCD-205ENST00000475443 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
DPCD-205ENST00000475443 MAGI1Q96QZ7 1491 aaPredicted RBP20.05■□□□□ 0.8
DPCD-205ENST00000475443 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
DPCD-205ENST00000475443 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
DPCD-205ENST00000475443 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
DPCD-205ENST00000475443 SYNJ2O15056 1496 aa19.97■□□□□ 0.79
DPCD-205ENST00000475443 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
DPCD-205ENST00000475443 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
DPCD-205ENST00000475443 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
DPCD-205ENST00000475443 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
DPCD-205ENST00000475443 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
DPCD-205ENST00000475443 ARAP1Q96P48 1450 aa19.93■□□□□ 0.78
DPCD-205ENST00000475443 TOP2BQ02880 1626 aa19.93■□□□□ 0.78
DPCD-205ENST00000475443 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
DPCD-205ENST00000475443 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
DPCD-205ENST00000475443 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
DPCD-205ENST00000475443 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
DPCD-205ENST00000475443 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
DPCD-205ENST00000475443 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
DPCD-205ENST00000475443 NUP160Q12769 1436 aa19.74■□□□□ 0.75
DPCD-205ENST00000475443 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
DPCD-205ENST00000475443 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
DPCD-205ENST00000475443 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
DPCD-205ENST00000475443 ERCC6L2Q5T890 1561 aa19.63■□□□□ 0.73
DPCD-205ENST00000475443 IGF1RP08069 1367 aa19.53■□□□□ 0.72
DPCD-205ENST00000475443 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
DPCD-205ENST00000475443 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
DPCD-205ENST00000475443 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms