RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 NISCHQ9Y2I1 1504 aa39.35■■■■□ 3.89
ITSN1-227ENST00000475422 ABCC9O60706 1549 aa35.32■■■■□ 3.24
ITSN1-227ENST00000475422 CCDC180Q9P1Z9 1646 aa35.31■■■■□ 3.24
ITSN1-227ENST00000475422 RB1CC1Q8TDY2 1594 aa33.62■■■□□ 2.97
ITSN1-227ENST00000475422 NACADO15069 1562 aa33.38■■■□□ 2.93
ITSN1-227ENST00000475422 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
ITSN1-227ENST00000475422 DNAJC5BQ9UF47 199 aa33.05■■■□□ 2.88
ITSN1-227ENST00000475422 PABPN1Q86U42 306 aaKnown RBP eCLIP32.9■■■□□ 2.86
ITSN1-227ENST00000475422 MYO15BQ96JP2 1530 aa32.88■■■□□ 2.85
ITSN1-227ENST00000475422 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.85
ITSN1-227ENST00000475422 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
ITSN1-227ENST00000475422 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
ITSN1-227ENST00000475422 DCAF1Q9Y4B6 1507 aa32.48■■■□□ 2.79
ITSN1-227ENST00000475422 SCRIBQ14160 1630 aa32.2■■■□□ 2.75
ITSN1-227ENST00000475422 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
ITSN1-227ENST00000475422 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
ITSN1-227ENST00000475422 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
ITSN1-227ENST00000475422 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
ITSN1-227ENST00000475422 NCAPD3P42695 1498 aa30.8■■■□□ 2.52
ITSN1-227ENST00000475422 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.51
ITSN1-227ENST00000475422 SMARCA4P51532 1647 aa30.7■■■□□ 2.51
ITSN1-227ENST00000475422 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
ITSN1-227ENST00000475422 BAZ1AQ9NRL2 1556 aaPredicted RBP30.57■■■□□ 2.48
ITSN1-227ENST00000475422 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
ITSN1-227ENST00000475422 ERCC6Q03468 1493 aa30.52■■■□□ 2.48
ITSN1-227ENST00000475422 BAZ1BQ9UIG0 1483 aaKnown RBP30.45■■■□□ 2.47
ITSN1-227ENST00000475422 CUX2O14529 1486 aa30.4■■■□□ 2.46
ITSN1-227ENST00000475422 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
ITSN1-227ENST00000475422 DNAJC5Q9H3Z4 198 aa30.36■■■□□ 2.45
ITSN1-227ENST00000475422 NESP48681 1621 aa30.33■■■□□ 2.45
ITSN1-227ENST00000475422 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.45
ITSN1-227ENST00000475422 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
ITSN1-227ENST00000475422 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
ITSN1-227ENST00000475422 WIZO95785 1651 aa29.98■■■□□ 2.39
ITSN1-227ENST00000475422 PDS5BQ9NTI5 1447 aa29.97■■■□□ 2.39
ITSN1-227ENST00000475422 KIF21AQ7Z4S6 1674 aa29.94■■■□□ 2.38
ITSN1-227ENST00000475422 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.37
ITSN1-227ENST00000475422 RSF1Q96T23 1441 aaPredicted RBP29.71■■■□□ 2.35
ITSN1-227ENST00000475422 MRC2Q9UBG0 1479 aa29.69■■■□□ 2.34
ITSN1-227ENST00000475422 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
ITSN1-227ENST00000475422 WDR62O43379 1518 aa29.6■■■□□ 2.33
ITSN1-227ENST00000475422 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
ITSN1-227ENST00000475422 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
ITSN1-227ENST00000475422 CFTRP13569 1480 aa29.53■■■□□ 2.32
ITSN1-227ENST00000475422 URB2Q14146 1524 aaKnown RBP29.28■■■□□ 2.28
ITSN1-227ENST00000475422 CCDC88BA6NC98 1476 aa29.26■■■□□ 2.27
ITSN1-227ENST00000475422 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
ITSN1-227ENST00000475422 TRIM41Q8WV44 630 aa29.12■■■□□ 2.25
ITSN1-227ENST00000475422 OSCARQ8IYS5 282 aa29.07■■■□□ 2.24
ITSN1-227ENST00000475422 IFT140Q96RY7 1462 aa28.99■■■□□ 2.23
ITSN1-227ENST00000475422 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
ITSN1-227ENST00000475422 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
ITSN1-227ENST00000475422 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
ITSN1-227ENST00000475422 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
ITSN1-227ENST00000475422 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
ITSN1-227ENST00000475422 TARBP1Q13395 1621 aaKnown RBP28.71■■■□□ 2.19
ITSN1-227ENST00000475422 AQRO60306 1485 aaKnown RBP eCLIP28.69■■■□□ 2.18
ITSN1-227ENST00000475422 POLA1P09884 1462 aaPredicted RBP28.69■■■□□ 2.18
ITSN1-227ENST00000475422 RIMBP3CA6NJZ7 1639 aa28.65■■■□□ 2.18
ITSN1-227ENST00000475422 RIMBP3BA6NNM3 1639 aa28.65■■■□□ 2.18
ITSN1-227ENST00000475422 RIMBP3Q9UFD9 1639 aa28.65■■■□□ 2.18
ITSN1-227ENST00000475422 SOGA1O94964 1423 aa28.6■■■□□ 2.17
ITSN1-227ENST00000475422 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
ITSN1-227ENST00000475422 CHD1O14646 1710 aa28.57■■■□□ 2.16
ITSN1-227ENST00000475422 FBLN2P98095 1184 aa28.57■■■□□ 2.16
ITSN1-227ENST00000475422 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
ITSN1-227ENST00000475422 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
ITSN1-227ENST00000475422 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
ITSN1-227ENST00000475422 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
ITSN1-227ENST00000475422 CUX1P39880 1505 aa28.48■■■□□ 2.15
ITSN1-227ENST00000475422 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
ITSN1-227ENST00000475422 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
ITSN1-227ENST00000475422 SNAPC4Q5SXM2 1469 aa28.4■■■□□ 2.14
ITSN1-227ENST00000475422 CHMP7Q8WUX9 453 aaPredicted RBP28.34■■■□□ 2.13
ITSN1-227ENST00000475422 GRIN2BQ13224 1484 aa28.33■■■□□ 2.13
ITSN1-227ENST00000475422 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
ITSN1-227ENST00000475422 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
ITSN1-227ENST00000475422 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
ITSN1-227ENST00000475422 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
ITSN1-227ENST00000475422 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
ITSN1-227ENST00000475422 SYNJ2O15056 1496 aa28.22■■■□□ 2.11
ITSN1-227ENST00000475422 CLASP1Q7Z460 1538 aa28.2■■■□□ 2.1
ITSN1-227ENST00000475422 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
ITSN1-227ENST00000475422 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.09
ITSN1-227ENST00000475422 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
ITSN1-227ENST00000475422 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
ITSN1-227ENST00000475422 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
ITSN1-227ENST00000475422 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
ITSN1-227ENST00000475422 GRIN2AQ12879 1464 aa27.96■■■□□ 2.07
ITSN1-227ENST00000475422 ADAMTS12P58397 1594 aa27.94■■■□□ 2.06
ITSN1-227ENST00000475422 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
ITSN1-227ENST00000475422 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
ITSN1-227ENST00000475422 ERICH3Q5RHP9 1530 aa27.84■■■□□ 2.05
ITSN1-227ENST00000475422 NUP160Q12769 1436 aa27.84■■■□□ 2.05
ITSN1-227ENST00000475422 ERCC6L2Q5T890 1561 aa27.78■■■□□ 2.04
ITSN1-227ENST00000475422 SHROOM2Q13796 1616 aa27.7■■■□□ 2.03
ITSN1-227ENST00000475422 PRG4Q92954 1404 aaPredicted RBP27.61■■■□□ 2.01
ITSN1-227ENST00000475422 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
ITSN1-227ENST00000475422 KIF27Q86VH2 1401 aa27.54■■■□□ 2
ITSN1-227ENST00000475422 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms