RNA–Protein interactions for RNA: ENST00000475353.1

RAF1-209, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 4

Gene RAF1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-209ENST00000475353 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
RAF1-209ENST00000475353 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
RAF1-209ENST00000475353 ABCC9O60706 1549 aa23.35■■□□□ 1.33
RAF1-209ENST00000475353 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
RAF1-209ENST00000475353 NACADO15069 1562 aa22.13■■□□□ 1.13
RAF1-209ENST00000475353 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
RAF1-209ENST00000475353 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
RAF1-209ENST00000475353 DNAJC5BQ9UF47 199 aa21.81■■□□□ 1.08
RAF1-209ENST00000475353 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
RAF1-209ENST00000475353 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
RAF1-209ENST00000475353 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
RAF1-209ENST00000475353 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
RAF1-209ENST00000475353 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
RAF1-209ENST00000475353 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
RAF1-209ENST00000475353 SHROOM4Q9ULL8 1493 aa21.28■■□□□ 1
RAF1-209ENST00000475353 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
RAF1-209ENST00000475353 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
RAF1-209ENST00000475353 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
RAF1-209ENST00000475353 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
RAF1-209ENST00000475353 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
RAF1-209ENST00000475353 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
RAF1-209ENST00000475353 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
RAF1-209ENST00000475353 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.84
RAF1-209ENST00000475353 HMGXB3Q12766 1538 aa20.28■□□□□ 0.84
RAF1-209ENST00000475353 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
RAF1-209ENST00000475353 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
RAF1-209ENST00000475353 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
RAF1-209ENST00000475353 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
RAF1-209ENST00000475353 NESP48681 1621 aa20.11■□□□□ 0.81
RAF1-209ENST00000475353 CUX2O14529 1486 aa20.03■□□□□ 0.8
RAF1-209ENST00000475353 WIZO95785 1651 aa19.99■□□□□ 0.79
RAF1-209ENST00000475353 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
RAF1-209ENST00000475353 DNAJC5Q9H3Z4 198 aa19.9■□□□□ 0.78
RAF1-209ENST00000475353 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
RAF1-209ENST00000475353 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
RAF1-209ENST00000475353 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
RAF1-209ENST00000475353 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
RAF1-209ENST00000475353 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
RAF1-209ENST00000475353 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
RAF1-209ENST00000475353 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
RAF1-209ENST00000475353 CFTRP13569 1480 aa19.63■□□□□ 0.73
RAF1-209ENST00000475353 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
RAF1-209ENST00000475353 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
RAF1-209ENST00000475353 WDR62O43379 1518 aa19.6■□□□□ 0.73
RAF1-209ENST00000475353 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
RAF1-209ENST00000475353 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
RAF1-209ENST00000475353 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
RAF1-209ENST00000475353 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
RAF1-209ENST00000475353 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
RAF1-209ENST00000475353 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
RAF1-209ENST00000475353 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
RAF1-209ENST00000475353 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
RAF1-209ENST00000475353 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
RAF1-209ENST00000475353 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
RAF1-209ENST00000475353 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
RAF1-209ENST00000475353 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
RAF1-209ENST00000475353 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
RAF1-209ENST00000475353 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
RAF1-209ENST00000475353 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.641e-11■■■■■ 39.8
RAF1-209ENST00000475353 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
RAF1-209ENST00000475353 SOGA1O94964 1423 aa19■□□□□ 0.63
RAF1-209ENST00000475353 CUX1P39880 1505 aa18.98■□□□□ 0.63
RAF1-209ENST00000475353 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
RAF1-209ENST00000475353 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
RAF1-209ENST00000475353 CHD1O14646 1710 aa18.93■□□□□ 0.62
RAF1-209ENST00000475353 FBLN2P98095 1184 aa18.91■□□□□ 0.62
RAF1-209ENST00000475353 RIMBP3CA6NJZ7 1639 aa18.9■□□□□ 0.62
RAF1-209ENST00000475353 RIMBP3BA6NNM3 1639 aa18.9■□□□□ 0.62
RAF1-209ENST00000475353 RIMBP3Q9UFD9 1639 aa18.9■□□□□ 0.62
RAF1-209ENST00000475353 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
RAF1-209ENST00000475353 ARHGEF11O15085 1522 aa18.85■□□□□ 0.61
RAF1-209ENST00000475353 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
RAF1-209ENST00000475353 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
RAF1-209ENST00000475353 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
RAF1-209ENST00000475353 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.59
RAF1-209ENST00000475353 GAPVD1Q14C86 1478 aa18.76■□□□□ 0.59
RAF1-209ENST00000475353 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
RAF1-209ENST00000475353 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
RAF1-209ENST00000475353 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
RAF1-209ENST00000475353 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
RAF1-209ENST00000475353 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.59
RAF1-209ENST00000475353 WRNQ14191 1432 aaPredicted RBP eCLIP18.71■□□□□ 0.59
RAF1-209ENST00000475353 TOP2BQ02880 1626 aa18.71■□□□□ 0.58
RAF1-209ENST00000475353 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
RAF1-209ENST00000475353 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
RAF1-209ENST00000475353 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
RAF1-209ENST00000475353 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
RAF1-209ENST00000475353 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
RAF1-209ENST00000475353 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
RAF1-209ENST00000475353 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
RAF1-209ENST00000475353 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
RAF1-209ENST00000475353 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
RAF1-209ENST00000475353 CEP170Q5SW79 1584 aa18.49■□□□□ 0.55
RAF1-209ENST00000475353 NUP160Q12769 1436 aa18.49■□□□□ 0.55
RAF1-209ENST00000475353 ERCC6L2Q5T890 1561 aa18.44■□□□□ 0.54
RAF1-209ENST00000475353 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
RAF1-209ENST00000475353 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
RAF1-209ENST00000475353 IGF1RP08069 1367 aa18.34■□□□□ 0.53
RAF1-209ENST00000475353 JPH4Q96JJ6 628 aa18.33■□□□□ 0.52
RAF1-209ENST00000475353 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms