RNA–Protein interactions for RNA: ENST00000475335.5

SIKE1-208, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-208ENST00000475335 NISCHQ9Y2I1 1504 aa51.77■■■■■ 5.88
SIKE1-208ENST00000475335 CCDC180Q9P1Z9 1646 aa46.1■■■■■ 4.97
SIKE1-208ENST00000475335 ABCC9O60706 1549 aa45.26■■■■■ 4.84
SIKE1-208ENST00000475335 RB1CC1Q8TDY2 1594 aa43.45■■■■■ 4.55
SIKE1-208ENST00000475335 NACADO15069 1562 aa43.37■■■■■ 4.53
SIKE1-208ENST00000475335 ZCCHC6Q5VYS8 1495 aaKnown RBP43.13■■■■■ 4.49
SIKE1-208ENST00000475335 MYO15BQ96JP2 1530 aa43.12■■■■■ 4.49
SIKE1-208ENST00000475335 DCAF8L2P0C7V8 631 aa43.08■■■■■ 4.49
SIKE1-208ENST00000475335 DCAF1Q9Y4B6 1507 aa42.86■■■■■ 4.45
SIKE1-208ENST00000475335 UNC13AQ9UPW8 1703 aa42.49■■■■■ 4.39
SIKE1-208ENST00000475335 BICRAQ9NZM4 1560 aa42.26■■■■■ 4.36
SIKE1-208ENST00000475335 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.35
SIKE1-208ENST00000475335 SCRIBQ14160 1630 aa42.03■■■■■ 4.32
SIKE1-208ENST00000475335 DNAJC5BQ9UF47 199 aa41.78■■■■■ 4.28
SIKE1-208ENST00000475335 SHROOM4Q9ULL8 1493 aa41.77■■■■■ 4.28
SIKE1-208ENST00000475335 EIF4G1Q04637 1599 aaKnown RBP41.1■■■■■ 4.17
SIKE1-208ENST00000475335 CC2D2AQ9P2K1 1620 aa40.96■■■■■ 4.15
SIKE1-208ENST00000475335 CECR2Q9BXF3 1484 aa40.7■■■■■ 4.11
SIKE1-208ENST00000475335 SMARCA4P51532 1647 aa40.21■■■■■ 4.03
SIKE1-208ENST00000475335 BAZ1AQ9NRL2 1556 aaPredicted RBP40.1■■■■■ 4.01
SIKE1-208ENST00000475335 NCAPD3P42695 1498 aa40.06■■■■■ 4
SIKE1-208ENST00000475335 ATAD2BQ9ULI0 1458 aa40.05■■■■■ 4
SIKE1-208ENST00000475335 SMARCA2P51531 1590 aa39.95■■■■□ 3.99
SIKE1-208ENST00000475335 MROH2BQ7Z745 1585 aa39.91■■■■□ 3.98
SIKE1-208ENST00000475335 PEG3Q9GZU2 1588 aa39.87■■■■□ 3.97
SIKE1-208ENST00000475335 HMGXB3Q12766 1538 aa39.86■■■■□ 3.97
SIKE1-208ENST00000475335 BAZ1BQ9UIG0 1483 aaKnown RBP39.66■■■■□ 3.94
SIKE1-208ENST00000475335 WIZO95785 1651 aa39.42■■■■□ 3.9
SIKE1-208ENST00000475335 RSF1Q96T23 1441 aaPredicted RBP39.37■■■■□ 3.89
SIKE1-208ENST00000475335 NESP48681 1621 aa39.15■■■■□ 3.86
SIKE1-208ENST00000475335 TOP2AP11388 1531 aaKnown RBP39.03■■■■□ 3.84
SIKE1-208ENST00000475335 LAMC3Q9Y6N6 1575 aa38.99■■■■□ 3.83
SIKE1-208ENST00000475335 ERCC6Q03468 1493 aa38.97■■■■□ 3.83
SIKE1-208ENST00000475335 CADPSQ9ULU8 1353 aa38.84■■■■□ 3.81
SIKE1-208ENST00000475335 CUX2O14529 1486 aa38.71■■■■□ 3.79
SIKE1-208ENST00000475335 PDS5BQ9NTI5 1447 aa38.7■■■■□ 3.79
SIKE1-208ENST00000475335 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
SIKE1-208ENST00000475335 THOC2Q8NI27 1593 aaKnown RBP38.65■■■■□ 3.78
SIKE1-208ENST00000475335 CFTRP13569 1480 aa38.61■■■■□ 3.77
SIKE1-208ENST00000475335 CCDC88BA6NC98 1476 aa38.55■■■■□ 3.76
SIKE1-208ENST00000475335 FANCD2Q9BXW9 1451 aa38.4■■■■□ 3.74
SIKE1-208ENST00000475335 MRC2Q9UBG0 1479 aa38.37■■■■□ 3.73
SIKE1-208ENST00000475335 CEP164Q9UPV0 1460 aa38.35■■■■□ 3.73
SIKE1-208ENST00000475335 WDR62O43379 1518 aa38.29■■■■□ 3.72
SIKE1-208ENST00000475335 PRDM2Q13029 1718 aa38.24■■■■□ 3.71
SIKE1-208ENST00000475335 URB2Q14146 1524 aaKnown RBP38.08■■■■□ 3.69
SIKE1-208ENST00000475335 SUPT5HO00267 1087 aaKnown RBP38.05■■■■□ 3.68
SIKE1-208ENST00000475335 TOPBP1Q92547 1522 aa37.79■■■■□ 3.64
SIKE1-208ENST00000475335 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
SIKE1-208ENST00000475335 DNAJC5Q9H3Z4 198 aa37.71■■■■□ 3.63
SIKE1-208ENST00000475335 ABCC8Q09428 1581 aa37.69■■■■□ 3.62
SIKE1-208ENST00000475335 IFT140Q96RY7 1462 aa37.58■■■■□ 3.61
SIKE1-208ENST00000475335 ZNF608Q9ULD9 1512 aaPredicted RBP37.47■■■■□ 3.59
SIKE1-208ENST00000475335 POLA1P09884 1462 aaPredicted RBP37.47■■■■□ 3.59
SIKE1-208ENST00000475335 CUX1P39880 1505 aa37.46■■■■□ 3.59
SIKE1-208ENST00000475335 TARBP1Q13395 1621 aaKnown RBP37.43■■■■□ 3.58
SIKE1-208ENST00000475335 FGD5Q6ZNL6 1462 aa37.33■■■■□ 3.57
SIKE1-208ENST00000475335 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
SIKE1-208ENST00000475335 RAD54L2Q9Y4B4 1467 aa37.28■■■■□ 3.56
SIKE1-208ENST00000475335 SOGA1O94964 1423 aa37.23■■■■□ 3.55
SIKE1-208ENST00000475335 AQRO60306 1485 aaKnown RBP eCLIP37.19■■■■□ 3.548e-7■■■□□ 16
SIKE1-208ENST00000475335 WDR97A6NE52 1622 aa37.08■■■■□ 3.53
SIKE1-208ENST00000475335 WRNQ14191 1432 aaPredicted RBP eCLIP37.08■■■■□ 3.53
SIKE1-208ENST00000475335 TDRD9Q8NDG6 1382 aaKnown RBP37.06■■■■□ 3.52
SIKE1-208ENST00000475335 SYNJ1O43426 1573 aa37.06■■■■□ 3.52
SIKE1-208ENST00000475335 TOP2BQ02880 1626 aa37.06■■■■□ 3.52
SIKE1-208ENST00000475335 BIVM-ERCC5R4GMW8 1640 aa37.06■■■■□ 3.52
SIKE1-208ENST00000475335 ABCA10Q8WWZ4 1543 aa36.98■■■■□ 3.51
SIKE1-208ENST00000475335 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
SIKE1-208ENST00000475335 ABCA5Q8WWZ7 1642 aa36.88■■■■□ 3.49
SIKE1-208ENST00000475335 GRIN2BQ13224 1484 aa36.86■■■■□ 3.49
SIKE1-208ENST00000475335 SNAPC4Q5SXM2 1469 aa36.86■■■■□ 3.49
SIKE1-208ENST00000475335 GAPVD1Q14C86 1478 aa36.82■■■■□ 3.49
SIKE1-208ENST00000475335 CHD1O14646 1710 aa36.82■■■■□ 3.48
SIKE1-208ENST00000475335 MAGI1Q96QZ7 1491 aaPredicted RBP36.79■■■■□ 3.48
SIKE1-208ENST00000475335 PBRM1Q86U86 1689 aa36.76■■■■□ 3.47
SIKE1-208ENST00000475335 SYNJ2O15056 1496 aa36.65■■■■□ 3.46
SIKE1-208ENST00000475335 FBLN2P98095 1184 aa36.63■■■■□ 3.45
SIKE1-208ENST00000475335 CHMP7Q8WUX9 453 aaPredicted RBP36.53■■■■□ 3.44
SIKE1-208ENST00000475335 ADAMTS12P58397 1594 aa36.53■■■■□ 3.44
SIKE1-208ENST00000475335 CLASP1Q7Z460 1538 aa36.51■■■■□ 3.44
SIKE1-208ENST00000475335 ERICH3Q5RHP9 1530 aa36.5■■■■□ 3.43
SIKE1-208ENST00000475335 RIMBP3CA6NJZ7 1639 aa36.5■■■■□ 3.43
SIKE1-208ENST00000475335 RIMBP3BA6NNM3 1639 aa36.5■■■■□ 3.43
SIKE1-208ENST00000475335 RIMBP3Q9UFD9 1639 aa36.5■■■■□ 3.43
SIKE1-208ENST00000475335 ARHGEF11O15085 1522 aa36.49■■■■□ 3.43
SIKE1-208ENST00000475335 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
SIKE1-208ENST00000475335 FHAD1B1AJZ9 1412 aa36.4■■■■□ 3.42
SIKE1-208ENST00000475335 TRIM41Q8WV44 630 aa36.3■■■■□ 3.4
SIKE1-208ENST00000475335 NUP160Q12769 1436 aa36.29■■■■□ 3.4
SIKE1-208ENST00000475335 KIF27Q86VH2 1401 aa36.29■■■■□ 3.4
SIKE1-208ENST00000475335 CEP170Q5SW79 1584 aa36.26■■■■□ 3.39
SIKE1-208ENST00000475335 IGF1RP08069 1367 aa36.22■■■■□ 3.39
SIKE1-208ENST00000475335 ARAP1Q96P48 1450 aa36.21■■■■□ 3.39
SIKE1-208ENST00000475335 CUL7Q14999 1698 aa36.11■■■■□ 3.37
SIKE1-208ENST00000475335 SHROOM2Q13796 1616 aa36.04■■■■□ 3.36
SIKE1-208ENST00000475335 CYB5RLQ6IPT4 315 aa36.03■■■■□ 3.36
SIKE1-208ENST00000475335 RUSC2Q8N2Y8 1516 aa36■■■■□ 3.35
SIKE1-208ENST00000475335 ERCC6L2Q5T890 1561 aa35.98■■■■□ 3.35
SIKE1-208ENST00000475335 CARMIL1Q5VZK9 1371 aa35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms