RNA–Protein interactions for RNA: ENST00000475327.1

CCT4P1-201, Transcript of chaperonin containing TCP1 subunit 4 pseudogene 1, humanhuman

BASIC

Gene CCT4P1, Length 1,558 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P1-201ENST00000475327 NISCHQ9Y2I1 1504 aa26.51■■□□□ 1.83
CCT4P1-201ENST00000475327 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
CCT4P1-201ENST00000475327 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
CCT4P1-201ENST00000475327 ABCC9O60706 1549 aa22.26■■□□□ 1.15
CCT4P1-201ENST00000475327 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
CCT4P1-201ENST00000475327 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
CCT4P1-201ENST00000475327 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
CCT4P1-201ENST00000475327 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
CCT4P1-201ENST00000475327 NACADO15069 1562 aa21.77■■□□□ 1.08
CCT4P1-201ENST00000475327 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
CCT4P1-201ENST00000475327 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
CCT4P1-201ENST00000475327 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
CCT4P1-201ENST00000475327 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
CCT4P1-201ENST00000475327 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
CCT4P1-201ENST00000475327 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
CCT4P1-201ENST00000475327 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
CCT4P1-201ENST00000475327 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
CCT4P1-201ENST00000475327 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
CCT4P1-201ENST00000475327 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
CCT4P1-201ENST00000475327 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
CCT4P1-201ENST00000475327 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
CCT4P1-201ENST00000475327 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
CCT4P1-201ENST00000475327 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
CCT4P1-201ENST00000475327 WIZO95785 1651 aa20.29■□□□□ 0.84
CCT4P1-201ENST00000475327 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
CCT4P1-201ENST00000475327 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
CCT4P1-201ENST00000475327 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
CCT4P1-201ENST00000475327 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
CCT4P1-201ENST00000475327 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
CCT4P1-201ENST00000475327 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.8
CCT4P1-201ENST00000475327 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
CCT4P1-201ENST00000475327 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
CCT4P1-201ENST00000475327 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
CCT4P1-201ENST00000475327 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
CCT4P1-201ENST00000475327 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
CCT4P1-201ENST00000475327 CFTRP13569 1480 aa19.53■□□□□ 0.72
CCT4P1-201ENST00000475327 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
CCT4P1-201ENST00000475327 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
CCT4P1-201ENST00000475327 NESP48681 1621 aa19.43■□□□□ 0.7
CCT4P1-201ENST00000475327 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
CCT4P1-201ENST00000475327 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
CCT4P1-201ENST00000475327 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
CCT4P1-201ENST00000475327 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
CCT4P1-201ENST00000475327 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.67
CCT4P1-201ENST00000475327 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
CCT4P1-201ENST00000475327 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
CCT4P1-201ENST00000475327 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
CCT4P1-201ENST00000475327 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
CCT4P1-201ENST00000475327 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
CCT4P1-201ENST00000475327 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
CCT4P1-201ENST00000475327 CUX1P39880 1505 aa19.15■□□□□ 0.66
CCT4P1-201ENST00000475327 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
CCT4P1-201ENST00000475327 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
CCT4P1-201ENST00000475327 MRC2Q9UBG0 1479 aa19.08■□□□□ 0.65
CCT4P1-201ENST00000475327 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
CCT4P1-201ENST00000475327 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
CCT4P1-201ENST00000475327 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
CCT4P1-201ENST00000475327 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
CCT4P1-201ENST00000475327 WDR62O43379 1518 aa18.98■□□□□ 0.63
CCT4P1-201ENST00000475327 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
CCT4P1-201ENST00000475327 SOGA1O94964 1423 aa18.91■□□□□ 0.62
CCT4P1-201ENST00000475327 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
CCT4P1-201ENST00000475327 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
CCT4P1-201ENST00000475327 EEA1Q15075 1411 aa18.87■□□□□ 0.61
CCT4P1-201ENST00000475327 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
CCT4P1-201ENST00000475327 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
CCT4P1-201ENST00000475327 CUX2O14529 1486 aa18.83■□□□□ 0.61
CCT4P1-201ENST00000475327 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
CCT4P1-201ENST00000475327 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
CCT4P1-201ENST00000475327 TARBP1Q13395 1621 aaKnown RBP18.81■□□□□ 0.6
CCT4P1-201ENST00000475327 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
CCT4P1-201ENST00000475327 WDR97A6NE52 1622 aa18.8■□□□□ 0.6
CCT4P1-201ENST00000475327 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
CCT4P1-201ENST00000475327 TDRD9Q8NDG6 1382 aaKnown RBP18.72■□□□□ 0.59
CCT4P1-201ENST00000475327 ABCA5Q8WWZ7 1642 aa18.7■□□□□ 0.58
CCT4P1-201ENST00000475327 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
CCT4P1-201ENST00000475327 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
CCT4P1-201ENST00000475327 AQRO60306 1485 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCT4P1-201ENST00000475327 IGF1RP08069 1367 aa18.65■□□□□ 0.58
CCT4P1-201ENST00000475327 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
CCT4P1-201ENST00000475327 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
CCT4P1-201ENST00000475327 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
CCT4P1-201ENST00000475327 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
CCT4P1-201ENST00000475327 ERICH3Q5RHP9 1530 aa18.63■□□□□ 0.57
CCT4P1-201ENST00000475327 KIF21BO75037 1637 aa18.62■□□□□ 0.57
CCT4P1-201ENST00000475327 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
CCT4P1-201ENST00000475327 CUL7Q14999 1698 aa18.6■□□□□ 0.57
CCT4P1-201ENST00000475327 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
CCT4P1-201ENST00000475327 PRXQ9BXM0 1461 aa18.59■□□□□ 0.57
CCT4P1-201ENST00000475327 GOLGA3Q08378 1498 aa18.58■□□□□ 0.56
CCT4P1-201ENST00000475327 UBTFP17480 764 aaKnown RBP18.54■□□□□ 0.56
CCT4P1-201ENST00000475327 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
CCT4P1-201ENST00000475327 SNAPC4Q5SXM2 1469 aa18.49■□□□□ 0.55
CCT4P1-201ENST00000475327 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
CCT4P1-201ENST00000475327 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
CCT4P1-201ENST00000475327 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
CCT4P1-201ENST00000475327 TNIKQ9UKE5 1360 aa18.45■□□□□ 0.54
CCT4P1-201ENST00000475327 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
CCT4P1-201ENST00000475327 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
CCT4P1-201ENST00000475327 FBLN2P98095 1184 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms