RNA–Protein interactions for RNA: ENST00000475325.1

FRMD4A-205, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 875 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-205ENST00000475325 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
FRMD4A-205ENST00000475325 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.68
FRMD4A-205ENST00000475325 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
FRMD4A-205ENST00000475325 ABCC9O60706 1549 aa18.29■□□□□ 0.52
FRMD4A-205ENST00000475325 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
FRMD4A-205ENST00000475325 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
FRMD4A-205ENST00000475325 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
FRMD4A-205ENST00000475325 NACADO15069 1562 aa18■□□□□ 0.47
FRMD4A-205ENST00000475325 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
FRMD4A-205ENST00000475325 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
FRMD4A-205ENST00000475325 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
FRMD4A-205ENST00000475325 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
FRMD4A-205ENST00000475325 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
FRMD4A-205ENST00000475325 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
FRMD4A-205ENST00000475325 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
FRMD4A-205ENST00000475325 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.31
FRMD4A-205ENST00000475325 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
FRMD4A-205ENST00000475325 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
FRMD4A-205ENST00000475325 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
FRMD4A-205ENST00000475325 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
FRMD4A-205ENST00000475325 WIZO95785 1651 aa16.85■□□□□ 0.29
FRMD4A-205ENST00000475325 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
FRMD4A-205ENST00000475325 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
FRMD4A-205ENST00000475325 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
FRMD4A-205ENST00000475325 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
FRMD4A-205ENST00000475325 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
FRMD4A-205ENST00000475325 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
FRMD4A-205ENST00000475325 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
FRMD4A-205ENST00000475325 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
FRMD4A-205ENST00000475325 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
FRMD4A-205ENST00000475325 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
FRMD4A-205ENST00000475325 CHIC1Q5VXU3 224 aa16.22■□□□□ 0.19
FRMD4A-205ENST00000475325 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
FRMD4A-205ENST00000475325 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
FRMD4A-205ENST00000475325 CFTRP13569 1480 aa16.16■□□□□ 0.18
FRMD4A-205ENST00000475325 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
FRMD4A-205ENST00000475325 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
FRMD4A-205ENST00000475325 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
FRMD4A-205ENST00000475325 NESP48681 1621 aa16.01■□□□□ 0.15
FRMD4A-205ENST00000475325 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
FRMD4A-205ENST00000475325 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
FRMD4A-205ENST00000475325 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.14
FRMD4A-205ENST00000475325 SYNJ1O43426 1573 aa15.96■□□□□ 0.14
FRMD4A-205ENST00000475325 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
FRMD4A-205ENST00000475325 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
FRMD4A-205ENST00000475325 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
FRMD4A-205ENST00000475325 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
FRMD4A-205ENST00000475325 CUX1P39880 1505 aa15.89■□□□□ 0.13
FRMD4A-205ENST00000475325 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
FRMD4A-205ENST00000475325 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
FRMD4A-205ENST00000475325 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
FRMD4A-205ENST00000475325 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
FRMD4A-205ENST00000475325 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
FRMD4A-205ENST00000475325 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
FRMD4A-205ENST00000475325 EEA1Q15075 1411 aa15.72■□□□□ 0.11
FRMD4A-205ENST00000475325 ERCC6Q03468 1493 aa15.71■□□□□ 0.11
FRMD4A-205ENST00000475325 SOGA1O94964 1423 aa15.71■□□□□ 0.11
FRMD4A-205ENST00000475325 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
FRMD4A-205ENST00000475325 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
FRMD4A-205ENST00000475325 WDR62O43379 1518 aa15.67■□□□□ 0.1
FRMD4A-205ENST00000475325 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
FRMD4A-205ENST00000475325 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
FRMD4A-205ENST00000475325 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
FRMD4A-205ENST00000475325 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
FRMD4A-205ENST00000475325 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
FRMD4A-205ENST00000475325 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
FRMD4A-205ENST00000475325 CUX2O14529 1486 aa15.59■□□□□ 0.09
FRMD4A-205ENST00000475325 CSRNP3Q8WYN3 585 aa15.58■□□□□ 0.08
FRMD4A-205ENST00000475325 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
FRMD4A-205ENST00000475325 LOC105371045A0A1W2PR82 267 aa15.55■□□□□ 0.08
FRMD4A-205ENST00000475325 KIF21BO75037 1637 aa15.54■□□□□ 0.08
FRMD4A-205ENST00000475325 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
FRMD4A-205ENST00000475325 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
FRMD4A-205ENST00000475325 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
FRMD4A-205ENST00000475325 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
FRMD4A-205ENST00000475325 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
FRMD4A-205ENST00000475325 PRXQ9BXM0 1461 aa15.46■□□□□ 0.06
FRMD4A-205ENST00000475325 IGF1RP08069 1367 aa15.45■□□□□ 0.06
FRMD4A-205ENST00000475325 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
FRMD4A-205ENST00000475325 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
FRMD4A-205ENST00000475325 TDRD9Q8NDG6 1382 aaKnown RBP15.44■□□□□ 0.06
FRMD4A-205ENST00000475325 CUL7Q14999 1698 aa15.44■□□□□ 0.06
FRMD4A-205ENST00000475325 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
FRMD4A-205ENST00000475325 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
FRMD4A-205ENST00000475325 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
FRMD4A-205ENST00000475325 CARMIL1Q5VZK9 1371 aa15.38■□□□□ 0.05
FRMD4A-205ENST00000475325 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
FRMD4A-205ENST00000475325 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
FRMD4A-205ENST00000475325 GRIN2BQ13224 1484 aa15.36■□□□□ 0.05
FRMD4A-205ENST00000475325 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
FRMD4A-205ENST00000475325 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
FRMD4A-205ENST00000475325 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
FRMD4A-205ENST00000475325 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
FRMD4A-205ENST00000475325 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.03
FRMD4A-205ENST00000475325 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
FRMD4A-205ENST00000475325 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
FRMD4A-205ENST00000475325 CLIP1P30622 1438 aa15.21■□□□□ 0.03
FRMD4A-205ENST00000475325 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
FRMD4A-205ENST00000475325 GRIN2AQ12879 1464 aa15.17■□□□□ 0.02
FRMD4A-205ENST00000475325 CHD1O14646 1710 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms