RNA–Protein interactions for RNA: ENST00000475240.5

ABCD4-208, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 546 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-208ENST00000475240 NISCHQ9Y2I1 1504 aa47.74■■■■■ 5.23
ABCD4-208ENST00000475240 CCDC180Q9P1Z9 1646 aa42.76■■■■■ 4.44
ABCD4-208ENST00000475240 ABCC9O60706 1549 aa42.49■■■■■ 4.39
ABCD4-208ENST00000475240 RB1CC1Q8TDY2 1594 aa40.57■■■■■ 4.09
ABCD4-208ENST00000475240 NACADO15069 1562 aa40.35■■■■■ 4.05
ABCD4-208ENST00000475240 DCAF8L2P0C7V8 631 aa40.19■■■■■ 4.02
ABCD4-208ENST00000475240 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
ABCD4-208ENST00000475240 ZCCHC6Q5VYS8 1495 aaKnown RBP39.65■■■■□ 3.94
ABCD4-208ENST00000475240 UNC13AQ9UPW8 1703 aa39.61■■■■□ 3.93
ABCD4-208ENST00000475240 PABPN1Q86U42 306 aaKnown RBP eCLIP39.57■■■■□ 3.93
ABCD4-208ENST00000475240 DNAJC5BQ9UF47 199 aa39.53■■■■□ 3.92
ABCD4-208ENST00000475240 DCAF1Q9Y4B6 1507 aa39.46■■■■□ 3.91
ABCD4-208ENST00000475240 BICRAQ9NZM4 1560 aa39.34■■■■□ 3.89
ABCD4-208ENST00000475240 SCRIBQ14160 1630 aa38.99■■■■□ 3.83
ABCD4-208ENST00000475240 SHROOM4Q9ULL8 1493 aa38.89■■■■□ 3.82
ABCD4-208ENST00000475240 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.74
ABCD4-208ENST00000475240 EIF4G1Q04637 1599 aaKnown RBP38.38■■■■□ 3.73
ABCD4-208ENST00000475240 CECR2Q9BXF3 1484 aa38.24■■■■□ 3.71
ABCD4-208ENST00000475240 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
ABCD4-208ENST00000475240 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
ABCD4-208ENST00000475240 ATAD2BQ9ULI0 1458 aa37.16■■■■□ 3.54
ABCD4-208ENST00000475240 SMARCA2P51531 1590 aa37.1■■■■□ 3.53
ABCD4-208ENST00000475240 BAZ1AQ9NRL2 1556 aaPredicted RBP37.07■■■■□ 3.52
ABCD4-208ENST00000475240 HMGXB3Q12766 1538 aa37.01■■■■□ 3.52
ABCD4-208ENST00000475240 BAZ1BQ9UIG0 1483 aaKnown RBP36.85■■■■□ 3.49
ABCD4-208ENST00000475240 PEG3Q9GZU2 1588 aa36.83■■■■□ 3.49
ABCD4-208ENST00000475240 MROH2BQ7Z745 1585 aa36.79■■■■□ 3.48
ABCD4-208ENST00000475240 ERCC6Q03468 1493 aa36.69■■■■□ 3.46
ABCD4-208ENST00000475240 NESP48681 1621 aa36.56■■■■□ 3.44
ABCD4-208ENST00000475240 CUX2O14529 1486 aa36.51■■■■□ 3.44
ABCD4-208ENST00000475240 LAMC3Q9Y6N6 1575 aa36.37■■■■□ 3.41
ABCD4-208ENST00000475240 WIZO95785 1651 aa36.36■■■■□ 3.41
ABCD4-208ENST00000475240 PDS5BQ9NTI5 1447 aa36.16■■■■□ 3.38
ABCD4-208ENST00000475240 THOC2Q8NI27 1593 aaKnown RBP36.15■■■■□ 3.38
ABCD4-208ENST00000475240 DNAJC5Q9H3Z4 198 aa36.13■■■■□ 3.37
ABCD4-208ENST00000475240 RSF1Q96T23 1441 aaPredicted RBP36.12■■■■□ 3.37
ABCD4-208ENST00000475240 KIF21AQ7Z4S6 1674 aa36.11■■■■□ 3.37
ABCD4-208ENST00000475240 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
ABCD4-208ENST00000475240 TOP2AP11388 1531 aaKnown RBP35.95■■■■□ 3.35
ABCD4-208ENST00000475240 MRC2Q9UBG0 1479 aa35.84■■■■□ 3.33
ABCD4-208ENST00000475240 CFTRP13569 1480 aa35.76■■■■□ 3.32
ABCD4-208ENST00000475240 CEP164Q9UPV0 1460 aa35.76■■■■□ 3.32
ABCD4-208ENST00000475240 WDR62O43379 1518 aa35.73■■■■□ 3.31
ABCD4-208ENST00000475240 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
ABCD4-208ENST00000475240 CCDC88BA6NC98 1476 aa35.51■■■■□ 3.28
ABCD4-208ENST00000475240 PRDM2Q13029 1718 aa35.44■■■■□ 3.26
ABCD4-208ENST00000475240 URB2Q14146 1524 aaKnown RBP35.4■■■■□ 3.26
ABCD4-208ENST00000475240 TOPBP1Q92547 1522 aa35.07■■■■□ 3.21
ABCD4-208ENST00000475240 ABCC8Q09428 1581 aa35.02■■■■□ 3.2
ABCD4-208ENST00000475240 IFT140Q96RY7 1462 aa35.02■■■■□ 3.2
ABCD4-208ENST00000475240 DNMBPQ6XZF7 1577 aa34.99■■■■□ 3.19
ABCD4-208ENST00000475240 ZNF608Q9ULD9 1512 aaPredicted RBP34.91■■■■□ 3.18
ABCD4-208ENST00000475240 OSCARQ8IYS5 282 aa34.86■■■■□ 3.17
ABCD4-208ENST00000475240 EIF4G3O43432 1585 aaKnown RBP34.77■■■■□ 3.16
ABCD4-208ENST00000475240 SUPT5HO00267 1087 aaKnown RBP34.74■■■■□ 3.15
ABCD4-208ENST00000475240 TARBP1Q13395 1621 aaKnown RBP34.73■■■■□ 3.15
ABCD4-208ENST00000475240 POLA1P09884 1462 aaPredicted RBP34.73■■■■□ 3.15
ABCD4-208ENST00000475240 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
ABCD4-208ENST00000475240 AQRO60306 1485 aaKnown RBP eCLIP34.63■■■■□ 3.133e-8■■■■■ 37.8
ABCD4-208ENST00000475240 RAD54L2Q9Y4B4 1467 aa34.58■■■■□ 3.13
ABCD4-208ENST00000475240 SOGA1O94964 1423 aa34.56■■■■□ 3.12
ABCD4-208ENST00000475240 CUX1P39880 1505 aa34.56■■■■□ 3.12
ABCD4-208ENST00000475240 FGD5Q6ZNL6 1462 aa34.56■■■■□ 3.12
ABCD4-208ENST00000475240 TDRD9Q8NDG6 1382 aaKnown RBP34.47■■■■□ 3.11
ABCD4-208ENST00000475240 CHD1O14646 1710 aa34.44■■■■□ 3.1
ABCD4-208ENST00000475240 WDR97A6NE52 1622 aa34.42■■■■□ 3.1
ABCD4-208ENST00000475240 RIMBP3CA6NJZ7 1639 aa34.4■■■■□ 3.1
ABCD4-208ENST00000475240 RIMBP3BA6NNM3 1639 aa34.4■■■■□ 3.1
ABCD4-208ENST00000475240 RIMBP3Q9UFD9 1639 aa34.4■■■■□ 3.1
ABCD4-208ENST00000475240 FBLN2P98095 1184 aa34.37■■■■□ 3.09
ABCD4-208ENST00000475240 ARHGEF11O15085 1522 aa34.33■■■■□ 3.09
ABCD4-208ENST00000475240 SNAPC4Q5SXM2 1469 aa34.32■■■■□ 3.08
ABCD4-208ENST00000475240 GRIN2BQ13224 1484 aa34.26■■■■□ 3.07
ABCD4-208ENST00000475240 MAGI1Q96QZ7 1491 aaPredicted RBP34.24■■■■□ 3.07
ABCD4-208ENST00000475240 GAPVD1Q14C86 1478 aa34.17■■■■□ 3.06
ABCD4-208ENST00000475240 ABCA10Q8WWZ4 1543 aa34.17■■■■□ 3.06
ABCD4-208ENST00000475240 CHMP7Q8WUX9 453 aaPredicted RBP34.15■■■■□ 3.06
ABCD4-208ENST00000475240 PBRM1Q86U86 1689 aa34.15■■■■□ 3.06
ABCD4-208ENST00000475240 SYNJ2O15056 1496 aa34.12■■■■□ 3.05
ABCD4-208ENST00000475240 ABCA5Q8WWZ7 1642 aa34.11■■■■□ 3.05
ABCD4-208ENST00000475240 WRNQ14191 1432 aaPredicted RBP eCLIP34.1■■■■□ 3.05
ABCD4-208ENST00000475240 TOP2BQ02880 1626 aa34.09■■■■□ 3.05
ABCD4-208ENST00000475240 BIVM-ERCC5R4GMW8 1640 aa34.09■■■■□ 3.05
ABCD4-208ENST00000475240 SYNJ1O43426 1573 aa34.08■■■■□ 3.05
ABCD4-208ENST00000475240 CLASP1Q7Z460 1538 aa34.05■■■■□ 3.04
ABCD4-208ENST00000475240 CYB5RLQ6IPT4 315 aa34.03■■■■□ 3.04
ABCD4-208ENST00000475240 ARAP1Q96P48 1450 aa34.01■■■■□ 3.03
ABCD4-208ENST00000475240 ADAMTS12P58397 1594 aa33.85■■■■□ 3.01
ABCD4-208ENST00000475240 GRIN2AQ12879 1464 aa33.82■■■■□ 3.01
ABCD4-208ENST00000475240 ERICH3Q5RHP9 1530 aa33.76■■■■□ 3
ABCD4-208ENST00000475240 FHAD1B1AJZ9 1412 aa33.74■■■□□ 2.99
ABCD4-208ENST00000475240 NUP160Q12769 1436 aa33.68■■■□□ 2.98
ABCD4-208ENST00000475240 CEP170Q5SW79 1584 aa33.68■■■□□ 2.98
ABCD4-208ENST00000475240 TRHP20396 242 aaPredicted RBP33.59■■■□□ 2.97
ABCD4-208ENST00000475240 ERCC6L2Q5T890 1561 aa33.53■■■□□ 2.96
ABCD4-208ENST00000475240 SHROOM2Q13796 1616 aa33.5■■■□□ 2.95
ABCD4-208ENST00000475240 KIF27Q86VH2 1401 aa33.45■■■□□ 2.94
ABCD4-208ENST00000475240 RUSC2Q8N2Y8 1516 aa33.37■■■□□ 2.93
ABCD4-208ENST00000475240 IGF1RP08069 1367 aa33.34■■■□□ 2.93
ABCD4-208ENST00000475240 CUL7Q14999 1698 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms