RNA–Protein interactions for RNA: ENST00000475238.1

CPT1B-210, Transcript of carnitine palmitoyltransferase 1B, humanhuman

TSL 3

Gene CPT1B, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1B-210ENST00000475238 NISCHQ9Y2I1 1504 aa32.04■■■□□ 2.72
CPT1B-210ENST00000475238 ABCC9O60706 1549 aa28.78■■■□□ 2.2
CPT1B-210ENST00000475238 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
CPT1B-210ENST00000475238 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
CPT1B-210ENST00000475238 NACADO15069 1562 aa27.12■■□□□ 1.93
CPT1B-210ENST00000475238 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
CPT1B-210ENST00000475238 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
CPT1B-210ENST00000475238 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
CPT1B-210ENST00000475238 PABPN1Q86U42 306 aaKnown RBP eCLIP26.79■■□□□ 1.889e-7■■■□□ 18.3
CPT1B-210ENST00000475238 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.87
CPT1B-210ENST00000475238 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
CPT1B-210ENST00000475238 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
CPT1B-210ENST00000475238 DCAF1Q9Y4B6 1507 aa26.4■■□□□ 1.82
CPT1B-210ENST00000475238 SCRIBQ14160 1630 aa26.25■■□□□ 1.79
CPT1B-210ENST00000475238 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
CPT1B-210ENST00000475238 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
CPT1B-210ENST00000475238 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
CPT1B-210ENST00000475238 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
CPT1B-210ENST00000475238 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
CPT1B-210ENST00000475238 SMARCA4P51532 1647 aa25.02■■□□□ 1.6
CPT1B-210ENST00000475238 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
CPT1B-210ENST00000475238 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
CPT1B-210ENST00000475238 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
CPT1B-210ENST00000475238 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
CPT1B-210ENST00000475238 NESP48681 1621 aa24.78■■□□□ 1.56
CPT1B-210ENST00000475238 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
CPT1B-210ENST00000475238 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
CPT1B-210ENST00000475238 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
CPT1B-210ENST00000475238 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
CPT1B-210ENST00000475238 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
CPT1B-210ENST00000475238 CUX2O14529 1486 aa24.69■■□□□ 1.54
CPT1B-210ENST00000475238 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
CPT1B-210ENST00000475238 WIZO95785 1651 aa24.49■■□□□ 1.51
CPT1B-210ENST00000475238 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
CPT1B-210ENST00000475238 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
CPT1B-210ENST00000475238 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
CPT1B-210ENST00000475238 CADPSQ9ULU8 1353 aa24.28■■□□□ 1.48
CPT1B-210ENST00000475238 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
CPT1B-210ENST00000475238 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
CPT1B-210ENST00000475238 WDR62O43379 1518 aa24.1■■□□□ 1.45
CPT1B-210ENST00000475238 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
CPT1B-210ENST00000475238 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
CPT1B-210ENST00000475238 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
CPT1B-210ENST00000475238 CFTRP13569 1480 aa24.02■■□□□ 1.44
CPT1B-210ENST00000475238 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
CPT1B-210ENST00000475238 PRDM2Q13029 1718 aa23.88■■□□□ 1.41
CPT1B-210ENST00000475238 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
CPT1B-210ENST00000475238 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
CPT1B-210ENST00000475238 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
CPT1B-210ENST00000475238 TOPBP1Q92547 1522 aa23.6■■□□□ 1.37
CPT1B-210ENST00000475238 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
CPT1B-210ENST00000475238 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
CPT1B-210ENST00000475238 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
CPT1B-210ENST00000475238 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
CPT1B-210ENST00000475238 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
CPT1B-210ENST00000475238 ABCC8Q09428 1581 aa23.42■■□□□ 1.34
CPT1B-210ENST00000475238 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
CPT1B-210ENST00000475238 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
CPT1B-210ENST00000475238 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
CPT1B-210ENST00000475238 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.33
CPT1B-210ENST00000475238 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
CPT1B-210ENST00000475238 CHD1O14646 1710 aa23.35■■□□□ 1.33
CPT1B-210ENST00000475238 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
CPT1B-210ENST00000475238 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
CPT1B-210ENST00000475238 CUX1P39880 1505 aa23.24■■□□□ 1.31
CPT1B-210ENST00000475238 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
CPT1B-210ENST00000475238 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
CPT1B-210ENST00000475238 SOGA1O94964 1423 aa23.21■■□□□ 1.31
CPT1B-210ENST00000475238 FBLN2P98095 1184 aa23.14■■□□□ 1.29
CPT1B-210ENST00000475238 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
CPT1B-210ENST00000475238 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
CPT1B-210ENST00000475238 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
CPT1B-210ENST00000475238 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
CPT1B-210ENST00000475238 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
CPT1B-210ENST00000475238 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
CPT1B-210ENST00000475238 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
CPT1B-210ENST00000475238 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
CPT1B-210ENST00000475238 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
CPT1B-210ENST00000475238 ABCA5Q8WWZ7 1642 aa22.95■■□□□ 1.26
CPT1B-210ENST00000475238 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
CPT1B-210ENST00000475238 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
CPT1B-210ENST00000475238 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
CPT1B-210ENST00000475238 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
CPT1B-210ENST00000475238 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
CPT1B-210ENST00000475238 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
CPT1B-210ENST00000475238 TOP2BQ02880 1626 aa22.83■■□□□ 1.25
CPT1B-210ENST00000475238 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
CPT1B-210ENST00000475238 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
CPT1B-210ENST00000475238 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
CPT1B-210ENST00000475238 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
CPT1B-210ENST00000475238 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
CPT1B-210ENST00000475238 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
CPT1B-210ENST00000475238 NUP160Q12769 1436 aa22.65■■□□□ 1.22
CPT1B-210ENST00000475238 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
CPT1B-210ENST00000475238 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
CPT1B-210ENST00000475238 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
CPT1B-210ENST00000475238 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
CPT1B-210ENST00000475238 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
CPT1B-210ENST00000475238 JPH4Q96JJ6 628 aa22.39■■□□□ 1.17
CPT1B-210ENST00000475238 KIF13AQ9H1H9 1805 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms