RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 NISCHQ9Y2I1 1504 aa24.18■■□□□ 1.46
TSPAN1-206ENST00000475163 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
TSPAN1-206ENST00000475163 ABCC9O60706 1549 aa20.72■□□□□ 0.91
TSPAN1-206ENST00000475163 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
TSPAN1-206ENST00000475163 DCAF8L2P0C7V8 631 aa20.16■□□□□ 0.82
TSPAN1-206ENST00000475163 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
TSPAN1-206ENST00000475163 NACADO15069 1562 aa20.04■□□□□ 0.8
TSPAN1-206ENST00000475163 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.79
TSPAN1-206ENST00000475163 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
TSPAN1-206ENST00000475163 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
TSPAN1-206ENST00000475163 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
TSPAN1-206ENST00000475163 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
TSPAN1-206ENST00000475163 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
TSPAN1-206ENST00000475163 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
TSPAN1-206ENST00000475163 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
TSPAN1-206ENST00000475163 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
TSPAN1-206ENST00000475163 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
TSPAN1-206ENST00000475163 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.6
TSPAN1-206ENST00000475163 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
TSPAN1-206ENST00000475163 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
TSPAN1-206ENST00000475163 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
TSPAN1-206ENST00000475163 SMARCA4P51532 1647 aa18.7■□□□□ 0.58
TSPAN1-206ENST00000475163 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
TSPAN1-206ENST00000475163 ATAD2BQ9ULI0 1458 aa18.53■□□□□ 0.56
TSPAN1-206ENST00000475163 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
TSPAN1-206ENST00000475163 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
TSPAN1-206ENST00000475163 PEG3Q9GZU2 1588 aa18.5■□□□□ 0.55
TSPAN1-206ENST00000475163 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
TSPAN1-206ENST00000475163 WIZO95785 1651 aa18.46■□□□□ 0.55
TSPAN1-206ENST00000475163 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
TSPAN1-206ENST00000475163 HMGXB3Q12766 1538 aa18.4■□□□□ 0.54
TSPAN1-206ENST00000475163 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
TSPAN1-206ENST00000475163 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
TSPAN1-206ENST00000475163 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
TSPAN1-206ENST00000475163 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
TSPAN1-206ENST00000475163 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
TSPAN1-206ENST00000475163 NESP48681 1621 aa17.94■□□□□ 0.46
TSPAN1-206ENST00000475163 CFTRP13569 1480 aa17.91■□□□□ 0.46
TSPAN1-206ENST00000475163 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
TSPAN1-206ENST00000475163 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
TSPAN1-206ENST00000475163 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
TSPAN1-206ENST00000475163 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
TSPAN1-206ENST00000475163 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
TSPAN1-206ENST00000475163 CUX2O14529 1486 aa17.71■□□□□ 0.43
TSPAN1-206ENST00000475163 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
TSPAN1-206ENST00000475163 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
TSPAN1-206ENST00000475163 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
TSPAN1-206ENST00000475163 WDR62O43379 1518 aa17.55■□□□□ 0.4
TSPAN1-206ENST00000475163 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
TSPAN1-206ENST00000475163 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
TSPAN1-206ENST00000475163 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
TSPAN1-206ENST00000475163 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
TSPAN1-206ENST00000475163 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
TSPAN1-206ENST00000475163 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
TSPAN1-206ENST00000475163 CUX1P39880 1505 aa17.47■□□□□ 0.39
TSPAN1-206ENST00000475163 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
TSPAN1-206ENST00000475163 TOP2BQ02880 1626 aa17.39■□□□□ 0.38
TSPAN1-206ENST00000475163 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
TSPAN1-206ENST00000475163 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
TSPAN1-206ENST00000475163 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
TSPAN1-206ENST00000475163 IFT140Q96RY7 1462 aa17.33■□□□□ 0.37
TSPAN1-206ENST00000475163 SOGA1O94964 1423 aa17.32■□□□□ 0.36
TSPAN1-206ENST00000475163 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
TSPAN1-206ENST00000475163 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
TSPAN1-206ENST00000475163 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
TSPAN1-206ENST00000475163 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
TSPAN1-206ENST00000475163 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
TSPAN1-206ENST00000475163 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
TSPAN1-206ENST00000475163 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
TSPAN1-206ENST00000475163 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
TSPAN1-206ENST00000475163 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
TSPAN1-206ENST00000475163 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
TSPAN1-206ENST00000475163 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
TSPAN1-206ENST00000475163 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
TSPAN1-206ENST00000475163 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
TSPAN1-206ENST00000475163 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
TSPAN1-206ENST00000475163 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
TSPAN1-206ENST00000475163 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
TSPAN1-206ENST00000475163 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
TSPAN1-206ENST00000475163 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
TSPAN1-206ENST00000475163 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
TSPAN1-206ENST00000475163 IGF1RP08069 1367 aa16.99■□□□□ 0.31
TSPAN1-206ENST00000475163 EEA1Q15075 1411 aa16.96■□□□□ 0.31
TSPAN1-206ENST00000475163 FBLN2P98095 1184 aa16.94■□□□□ 0.3
TSPAN1-206ENST00000475163 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
TSPAN1-206ENST00000475163 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
TSPAN1-206ENST00000475163 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
TSPAN1-206ENST00000475163 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
TSPAN1-206ENST00000475163 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
TSPAN1-206ENST00000475163 CUL7Q14999 1698 aa16.92■□□□□ 0.3
TSPAN1-206ENST00000475163 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
TSPAN1-206ENST00000475163 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
TSPAN1-206ENST00000475163 CARMIL1Q5VZK9 1371 aa16.9■□□□□ 0.3
TSPAN1-206ENST00000475163 CHD1O14646 1710 aa16.9■□□□□ 0.3
TSPAN1-206ENST00000475163 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
TSPAN1-206ENST00000475163 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
TSPAN1-206ENST00000475163 RIMBP3CA6NJZ7 1639 aa16.84■□□□□ 0.29
TSPAN1-206ENST00000475163 RIMBP3BA6NNM3 1639 aa16.84■□□□□ 0.29
TSPAN1-206ENST00000475163 RIMBP3Q9UFD9 1639 aa16.84■□□□□ 0.29
TSPAN1-206ENST00000475163 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms