RNA–Protein interactions for RNA: ENST00000475144.1

RFX5-218, Transcript of regulatory factor X5, humanhuman

TSL 2

Gene RFX5, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5-218ENST00000475144 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
RFX5-218ENST00000475144 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
RFX5-218ENST00000475144 ABCC9O60706 1549 aa25.63■■□□□ 1.69
RFX5-218ENST00000475144 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
RFX5-218ENST00000475144 NACADO15069 1562 aa24.52■■□□□ 1.52
RFX5-218ENST00000475144 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
RFX5-218ENST00000475144 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
RFX5-218ENST00000475144 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
RFX5-218ENST00000475144 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
RFX5-218ENST00000475144 UNC13AQ9UPW8 1703 aa24.21■■□□□ 1.47
RFX5-218ENST00000475144 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
RFX5-218ENST00000475144 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
RFX5-218ENST00000475144 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
RFX5-218ENST00000475144 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
RFX5-218ENST00000475144 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.37
RFX5-218ENST00000475144 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
RFX5-218ENST00000475144 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
RFX5-218ENST00000475144 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
RFX5-218ENST00000475144 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
RFX5-218ENST00000475144 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
RFX5-218ENST00000475144 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
RFX5-218ENST00000475144 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
RFX5-218ENST00000475144 ATAD2BQ9ULI0 1458 aa22.62■■□□□ 1.21
RFX5-218ENST00000475144 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
RFX5-218ENST00000475144 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
RFX5-218ENST00000475144 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
RFX5-218ENST00000475144 WIZO95785 1651 aa22.42■■□□□ 1.18
RFX5-218ENST00000475144 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
RFX5-218ENST00000475144 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
RFX5-218ENST00000475144 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
RFX5-218ENST00000475144 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
RFX5-218ENST00000475144 NESP48681 1621 aa22.08■■□□□ 1.13
RFX5-218ENST00000475144 LAMC3Q9Y6N6 1575 aa22.05■■□□□ 1.12
RFX5-218ENST00000475144 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
RFX5-218ENST00000475144 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
RFX5-218ENST00000475144 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
RFX5-218ENST00000475144 CUX2O14529 1486 aa21.86■■□□□ 1.09
RFX5-218ENST00000475144 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
RFX5-218ENST00000475144 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
RFX5-218ENST00000475144 CFTRP13569 1480 aa21.82■■□□□ 1.08
RFX5-218ENST00000475144 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
RFX5-218ENST00000475144 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
RFX5-218ENST00000475144 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
RFX5-218ENST00000475144 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
RFX5-218ENST00000475144 WDR62O43379 1518 aa21.63■■□□□ 1.05
RFX5-218ENST00000475144 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
RFX5-218ENST00000475144 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
RFX5-218ENST00000475144 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
RFX5-218ENST00000475144 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
RFX5-218ENST00000475144 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
RFX5-218ENST00000475144 ABCC8Q09428 1581 aa21.28■■□□□ 1
RFX5-218ENST00000475144 CUX1P39880 1505 aa21.23■□□□□ 0.99
RFX5-218ENST00000475144 TARBP1Q13395 1621 aaKnown RBP21.22■□□□□ 0.99
RFX5-218ENST00000475144 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
RFX5-218ENST00000475144 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
RFX5-218ENST00000475144 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
RFX5-218ENST00000475144 EIF4G3O43432 1585 aaKnown RBP21.13■□□□□ 0.97
RFX5-218ENST00000475144 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
RFX5-218ENST00000475144 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
RFX5-218ENST00000475144 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
RFX5-218ENST00000475144 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
RFX5-218ENST00000475144 SYNJ1O43426 1573 aa21.08■□□□□ 0.97
RFX5-218ENST00000475144 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
RFX5-218ENST00000475144 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
RFX5-218ENST00000475144 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
RFX5-218ENST00000475144 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
RFX5-218ENST00000475144 SOGA1O94964 1423 aa20.98■□□□□ 0.95
RFX5-218ENST00000475144 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
RFX5-218ENST00000475144 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.94
RFX5-218ENST00000475144 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
RFX5-218ENST00000475144 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
RFX5-218ENST00000475144 CHD1O14646 1710 aa20.89■□□□□ 0.93
RFX5-218ENST00000475144 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
RFX5-218ENST00000475144 FBLN2P98095 1184 aa20.85■□□□□ 0.93
RFX5-218ENST00000475144 SNAPC4Q5SXM2 1469 aa20.8■□□□□ 0.92
RFX5-218ENST00000475144 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
RFX5-218ENST00000475144 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
RFX5-218ENST00000475144 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
RFX5-218ENST00000475144 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
RFX5-218ENST00000475144 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
RFX5-218ENST00000475144 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
RFX5-218ENST00000475144 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
RFX5-218ENST00000475144 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
RFX5-218ENST00000475144 SYNJ2O15056 1496 aa20.67■□□□□ 0.9
RFX5-218ENST00000475144 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
RFX5-218ENST00000475144 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
RFX5-218ENST00000475144 CHMP7Q8WUX9 453 aaPredicted RBP20.61■□□□□ 0.89
RFX5-218ENST00000475144 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
RFX5-218ENST00000475144 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
RFX5-218ENST00000475144 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
RFX5-218ENST00000475144 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
RFX5-218ENST00000475144 CUL7Q14999 1698 aa20.53■□□□□ 0.88
RFX5-218ENST00000475144 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
RFX5-218ENST00000475144 NUP160Q12769 1436 aa20.49■□□□□ 0.87
RFX5-218ENST00000475144 IGF1RP08069 1367 aa20.45■□□□□ 0.86
RFX5-218ENST00000475144 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
RFX5-218ENST00000475144 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
RFX5-218ENST00000475144 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
RFX5-218ENST00000475144 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
RFX5-218ENST00000475144 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms