RNA–Protein interactions for RNA: ENST00000475140.5

PDZD4-204, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 830 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-204ENST00000475140 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.02
PDZD4-204ENST00000475140 CCDC180Q9P1Z9 1646 aa41.45■■■■■ 4.23
PDZD4-204ENST00000475140 ABCC9O60706 1549 aa41.23■■■■■ 4.19
PDZD4-204ENST00000475140 RB1CC1Q8TDY2 1594 aa39.35■■■■□ 3.89
PDZD4-204ENST00000475140 DCAF8L2P0C7V8 631 aa39.18■■■■□ 3.86
PDZD4-204ENST00000475140 NACADO15069 1562 aa39.14■■■■□ 3.86
PDZD4-204ENST00000475140 MYO15BQ96JP2 1530 aa38.67■■■■□ 3.78
PDZD4-204ENST00000475140 ZCCHC6Q5VYS8 1495 aaKnown RBP38.51■■■■□ 3.76
PDZD4-204ENST00000475140 PABPN1Q86U42 306 aaKnown RBP eCLIP38.47■■■■□ 3.75
PDZD4-204ENST00000475140 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
PDZD4-204ENST00000475140 DNAJC5BQ9UF47 199 aa38.33■■■■□ 3.73
PDZD4-204ENST00000475140 DCAF1Q9Y4B6 1507 aa38.3■■■■□ 3.72
PDZD4-204ENST00000475140 BICRAQ9NZM4 1560 aa38.13■■■■□ 3.69
PDZD4-204ENST00000475140 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
PDZD4-204ENST00000475140 SHROOM4Q9ULL8 1493 aa37.68■■■■□ 3.62
PDZD4-204ENST00000475140 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
PDZD4-204ENST00000475140 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
PDZD4-204ENST00000475140 CECR2Q9BXF3 1484 aa37.1■■■■□ 3.53
PDZD4-204ENST00000475140 NCAPD3P42695 1498 aa36.12■■■■□ 3.37
PDZD4-204ENST00000475140 SMARCA4P51532 1647 aa36.12■■■■□ 3.37
PDZD4-204ENST00000475140 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.37
PDZD4-204ENST00000475140 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
PDZD4-204ENST00000475140 BAZ1AQ9NRL2 1556 aaPredicted RBP36.01■■■■□ 3.35
PDZD4-204ENST00000475140 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
PDZD4-204ENST00000475140 BAZ1BQ9UIG0 1483 aaKnown RBP35.8■■■■□ 3.32
PDZD4-204ENST00000475140 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
PDZD4-204ENST00000475140 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
PDZD4-204ENST00000475140 ERCC6Q03468 1493 aa35.62■■■■□ 3.29
PDZD4-204ENST00000475140 NESP48681 1621 aa35.48■■■■□ 3.27
PDZD4-204ENST00000475140 CUX2O14529 1486 aa35.37■■■■□ 3.25
PDZD4-204ENST00000475140 WIZO95785 1651 aa35.33■■■■□ 3.25
PDZD4-204ENST00000475140 LAMC3Q9Y6N6 1575 aa35.27■■■■□ 3.24
PDZD4-204ENST00000475140 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
PDZD4-204ENST00000475140 PDS5BQ9NTI5 1447 aa35.11■■■■□ 3.21
PDZD4-204ENST00000475140 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
PDZD4-204ENST00000475140 THOC2Q8NI27 1593 aaKnown RBP35.02■■■■□ 3.2
PDZD4-204ENST00000475140 KIF21AQ7Z4S6 1674 aa35■■■■□ 3.19
PDZD4-204ENST00000475140 DNAJC5Q9H3Z4 198 aa34.98■■■■□ 3.19
PDZD4-204ENST00000475140 TOP2AP11388 1531 aaKnown RBP34.92■■■■□ 3.18
PDZD4-204ENST00000475140 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
PDZD4-204ENST00000475140 CFTRP13569 1480 aa34.72■■■■□ 3.15
PDZD4-204ENST00000475140 CEP164Q9UPV0 1460 aa34.71■■■■□ 3.15
PDZD4-204ENST00000475140 FANCD2Q9BXW9 1451 aa34.69■■■■□ 3.14
PDZD4-204ENST00000475140 WDR62O43379 1518 aa34.64■■■■□ 3.14
PDZD4-204ENST00000475140 CCDC88BA6NC98 1476 aa34.53■■■■□ 3.12
PDZD4-204ENST00000475140 URB2Q14146 1524 aaKnown RBP34.35■■■■□ 3.09
PDZD4-204ENST00000475140 PRDM2Q13029 1718 aa34.33■■■■□ 3.09
PDZD4-204ENST00000475140 TOPBP1Q92547 1522 aa34.04■■■■□ 3.04
PDZD4-204ENST00000475140 ABCC8Q09428 1581 aa34.01■■■■□ 3.03
PDZD4-204ENST00000475140 IFT140Q96RY7 1462 aa34■■■■□ 3.03
PDZD4-204ENST00000475140 DNMBPQ6XZF7 1577 aa33.95■■■■□ 3.03
PDZD4-204ENST00000475140 SUPT5HO00267 1087 aaKnown RBP33.95■■■■□ 3.03
PDZD4-204ENST00000475140 ZNF608Q9ULD9 1512 aaPredicted RBP33.89■■■■□ 3.02
PDZD4-204ENST00000475140 OSCARQ8IYS5 282 aa33.86■■■■□ 3.01
PDZD4-204ENST00000475140 POLA1P09884 1462 aaPredicted RBP33.73■■■□□ 2.99
PDZD4-204ENST00000475140 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
PDZD4-204ENST00000475140 TRIM41Q8WV44 630 aa33.7■■■□□ 2.99
PDZD4-204ENST00000475140 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
PDZD4-204ENST00000475140 AQRO60306 1485 aaKnown RBP eCLIP33.64■■■□□ 2.98
PDZD4-204ENST00000475140 RAD54L2Q9Y4B4 1467 aa33.62■■■□□ 2.97
PDZD4-204ENST00000475140 SOGA1O94964 1423 aa33.62■■■□□ 2.97
PDZD4-204ENST00000475140 FGD5Q6ZNL6 1462 aa33.58■■■□□ 2.97
PDZD4-204ENST00000475140 CUX1P39880 1505 aa33.57■■■□□ 2.96
PDZD4-204ENST00000475140 TDRD9Q8NDG6 1382 aaKnown RBP33.51■■■□□ 2.96
PDZD4-204ENST00000475140 FBLN2P98095 1184 aa33.46■■■□□ 2.95
PDZD4-204ENST00000475140 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
PDZD4-204ENST00000475140 CHD1O14646 1710 aa33.37■■■□□ 2.93
PDZD4-204ENST00000475140 SNAPC4Q5SXM2 1469 aa33.32■■■□□ 2.92
PDZD4-204ENST00000475140 RIMBP3CA6NJZ7 1639 aa33.32■■■□□ 2.92
PDZD4-204ENST00000475140 RIMBP3BA6NNM3 1639 aa33.32■■■□□ 2.92
PDZD4-204ENST00000475140 RIMBP3Q9UFD9 1639 aa33.32■■■□□ 2.92
PDZD4-204ENST00000475140 GRIN2BQ13224 1484 aa33.27■■■□□ 2.92
PDZD4-204ENST00000475140 ARHGEF11O15085 1522 aa33.27■■■□□ 2.92
PDZD4-204ENST00000475140 CHMP7Q8WUX9 453 aaPredicted RBP33.23■■■□□ 2.91
PDZD4-204ENST00000475140 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
PDZD4-204ENST00000475140 GAPVD1Q14C86 1478 aa33.2■■■□□ 2.91
PDZD4-204ENST00000475140 WRNQ14191 1432 aaPredicted RBP eCLIP33.19■■■□□ 2.9
PDZD4-204ENST00000475140 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
PDZD4-204ENST00000475140 SYNJ2O15056 1496 aa33.12■■■□□ 2.89
PDZD4-204ENST00000475140 TOP2BQ02880 1626 aa33.12■■■□□ 2.89
PDZD4-204ENST00000475140 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
PDZD4-204ENST00000475140 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
PDZD4-204ENST00000475140 SYNJ1O43426 1573 aa33.09■■■□□ 2.89
PDZD4-204ENST00000475140 ABCA5Q8WWZ7 1642 aa33.09■■■□□ 2.89
PDZD4-204ENST00000475140 CYB5RLQ6IPT4 315 aa33.07■■■□□ 2.88
PDZD4-204ENST00000475140 CLASP1Q7Z460 1538 aa33.01■■■□□ 2.87
PDZD4-204ENST00000475140 ARAP1Q96P48 1450 aa32.96■■■□□ 2.87
PDZD4-204ENST00000475140 ADAMTS12P58397 1594 aa32.84■■■□□ 2.85
PDZD4-204ENST00000475140 GRIN2AQ12879 1464 aa32.84■■■□□ 2.85
PDZD4-204ENST00000475140 FHAD1B1AJZ9 1412 aa32.79■■■□□ 2.84
PDZD4-204ENST00000475140 ERICH3Q5RHP9 1530 aa32.78■■■□□ 2.84
PDZD4-204ENST00000475140 NUP160Q12769 1436 aa32.68■■■□□ 2.82
PDZD4-204ENST00000475140 CEP170Q5SW79 1584 aa32.68■■■□□ 2.82
PDZD4-204ENST00000475140 TRHP20396 242 aaPredicted RBP32.65■■■□□ 2.82
PDZD4-204ENST00000475140 KIF27Q86VH2 1401 aa32.54■■■□□ 2.8
PDZD4-204ENST00000475140 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
PDZD4-204ENST00000475140 SHROOM2Q13796 1616 aa32.47■■■□□ 2.79
PDZD4-204ENST00000475140 IGF1RP08069 1367 aa32.45■■■□□ 2.79
PDZD4-204ENST00000475140 JPH4Q96JJ6 628 aa32.41■■■□□ 2.78
PDZD4-204ENST00000475140 PRG4Q92954 1404 aaPredicted RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms