RNA–Protein interactions for RNA: ENST00000475068.1

SRSF12-202, Transcript of serine and arginine rich splicing factor 12, humanhuman

TSL 5

Gene SRSF12, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF12-202ENST00000475068 NISCHQ9Y2I1 1504 aa55.11■■■■■ 6.41
SRSF12-202ENST00000475068 ABCC9O60706 1549 aa49.81■■■■■ 5.56
SRSF12-202ENST00000475068 CCDC180Q9P1Z9 1646 aa49.51■■■■■ 5.52
SRSF12-202ENST00000475068 RB1CC1Q8TDY2 1594 aa47.27■■■■■ 5.16
SRSF12-202ENST00000475068 DNAJC5BQ9UF47 199 aa47.13■■■■■ 5.14
SRSF12-202ENST00000475068 NACADO15069 1562 aa46.9■■■■■ 5.1
SRSF12-202ENST00000475068 DCAF8L2P0C7V8 631 aa46.58■■■■■ 5.05
SRSF12-202ENST00000475068 PABPN1Q86U42 306 aaKnown RBP eCLIP46.38■■■■■ 5.02
SRSF12-202ENST00000475068 UNC13AQ9UPW8 1703 aa46.25■■■■■ 4.99
SRSF12-202ENST00000475068 MYO15BQ96JP2 1530 aa46.2■■■■■ 4.99
SRSF12-202ENST00000475068 BICRAQ9NZM4 1560 aa46■■■■■ 4.95
SRSF12-202ENST00000475068 ZCCHC6Q5VYS8 1495 aaKnown RBP45.6■■■■■ 4.89
SRSF12-202ENST00000475068 DCAF1Q9Y4B6 1507 aa45.5■■■■■ 4.87
SRSF12-202ENST00000475068 SHROOM4Q9ULL8 1493 aa45.26■■■■■ 4.84
SRSF12-202ENST00000475068 SCRIBQ14160 1630 aa45.09■■■■■ 4.81
SRSF12-202ENST00000475068 CC2D2AQ9P2K1 1620 aa45■■■■■ 4.79
SRSF12-202ENST00000475068 CECR2Q9BXF3 1484 aa44.91■■■■■ 4.78
SRSF12-202ENST00000475068 EIF4G1Q04637 1599 aaKnown RBP44.83■■■■■ 4.77
SRSF12-202ENST00000475068 DNAJC5Q9H3Z4 198 aa43.43■■■■■ 4.54
SRSF12-202ENST00000475068 NCAPD3P42695 1498 aa43.36■■■■■ 4.53
SRSF12-202ENST00000475068 ATAD2BQ9ULI0 1458 aa43.17■■■■■ 4.5
SRSF12-202ENST00000475068 CUX2O14529 1486 aa43.04■■■■■ 4.48
SRSF12-202ENST00000475068 SMARCA4P51532 1647 aa43.02■■■■■ 4.48
SRSF12-202ENST00000475068 ERCC6Q03468 1493 aa42.97■■■■■ 4.47
SRSF12-202ENST00000475068 SMARCA2P51531 1590 aa42.97■■■■■ 4.47
SRSF12-202ENST00000475068 HMGXB3Q12766 1538 aa42.96■■■■■ 4.47
SRSF12-202ENST00000475068 NESP48681 1621 aa42.76■■■■■ 4.44
SRSF12-202ENST00000475068 BAZ1AQ9NRL2 1556 aaPredicted RBP42.74■■■■■ 4.43
SRSF12-202ENST00000475068 BAZ1BQ9UIG0 1483 aaKnown RBP42.68■■■■■ 4.42
SRSF12-202ENST00000475068 PEG3Q9GZU2 1588 aa42.64■■■■■ 4.42
SRSF12-202ENST00000475068 MROH2BQ7Z745 1585 aa42.48■■■■■ 4.39
SRSF12-202ENST00000475068 LAMC3Q9Y6N6 1575 aa42.35■■■■■ 4.37
SRSF12-202ENST00000475068 THOC2Q8NI27 1593 aaKnown RBP42.35■■■■■ 4.37
SRSF12-202ENST00000475068 KIF21AQ7Z4S6 1674 aa42.15■■■■■ 4.34
SRSF12-202ENST00000475068 PDS5BQ9NTI5 1447 aa42.12■■■■■ 4.33
SRSF12-202ENST00000475068 CADPSQ9ULU8 1353 aa42.01■■■■■ 4.31
SRSF12-202ENST00000475068 WIZO95785 1651 aa41.93■■■■■ 4.3
SRSF12-202ENST00000475068 MRC2Q9UBG0 1479 aa41.78■■■■■ 4.28
SRSF12-202ENST00000475068 WDR62O43379 1518 aa41.7■■■■■ 4.27
SRSF12-202ENST00000475068 CEP164Q9UPV0 1460 aa41.53■■■■■ 4.24
SRSF12-202ENST00000475068 FANCD2Q9BXW9 1451 aa41.5■■■■■ 4.23
SRSF12-202ENST00000475068 RSF1Q96T23 1441 aaPredicted RBP41.5■■■■■ 4.23
SRSF12-202ENST00000475068 CFTRP13569 1480 aa41.48■■■■■ 4.23
SRSF12-202ENST00000475068 TOP2AP11388 1531 aaKnown RBP41.34■■■■■ 4.21
SRSF12-202ENST00000475068 TRIM41Q8WV44 630 aa41.31■■■■■ 4.2
SRSF12-202ENST00000475068 URB2Q14146 1524 aaKnown RBP41.21■■■■■ 4.19
SRSF12-202ENST00000475068 OSCARQ8IYS5 282 aa41.07■■■■■ 4.17
SRSF12-202ENST00000475068 PRDM2Q13029 1718 aa40.95■■■■■ 4.15
SRSF12-202ENST00000475068 CCDC88BA6NC98 1476 aa40.94■■■■■ 4.14
SRSF12-202ENST00000475068 ZNF608Q9ULD9 1512 aaPredicted RBP40.76■■■■■ 4.12
SRSF12-202ENST00000475068 IFT140Q96RY7 1462 aa40.74■■■■■ 4.11
SRSF12-202ENST00000475068 TOPBP1Q92547 1522 aa40.69■■■■■ 4.1
SRSF12-202ENST00000475068 ABCC8Q09428 1581 aa40.56■■■■■ 4.08
SRSF12-202ENST00000475068 RIMBP3CA6NJZ7 1639 aa40.54■■■■■ 4.08
SRSF12-202ENST00000475068 RIMBP3BA6NNM3 1639 aa40.54■■■■■ 4.08
SRSF12-202ENST00000475068 RIMBP3Q9UFD9 1639 aa40.54■■■■■ 4.08
SRSF12-202ENST00000475068 DNMBPQ6XZF7 1577 aa40.49■■■■■ 4.07
SRSF12-202ENST00000475068 EIF4G3O43432 1585 aaKnown RBP40.45■■■■■ 4.07
SRSF12-202ENST00000475068 ARHGEF11O15085 1522 aa40.38■■■■■ 4.06
SRSF12-202ENST00000475068 TARBP1Q13395 1621 aaKnown RBP40.38■■■■■ 4.05
SRSF12-202ENST00000475068 AQRO60306 1485 aaKnown RBP eCLIP40.35■■■■■ 4.05
SRSF12-202ENST00000475068 POLA1P09884 1462 aaPredicted RBP40.26■■■■■ 4.04
SRSF12-202ENST00000475068 CHD1O14646 1710 aa40.2■■■■■ 4.03
SRSF12-202ENST00000475068 RAD54L2Q9Y4B4 1467 aa40.14■■■■■ 4.02
SRSF12-202ENST00000475068 CYB5RLQ6IPT4 315 aa40.13■■■■■ 4.01
SRSF12-202ENST00000475068 SOGA1O94964 1423 aa40.08■■■■■ 4.01
SRSF12-202ENST00000475068 FBLN2P98095 1184 aa40.07■■■■■ 4.01
SRSF12-202ENST00000475068 TDRD9Q8NDG6 1382 aaKnown RBP40.05■■■■■ 4
SRSF12-202ENST00000475068 ARAP1Q96P48 1450 aa39.99■■■■□ 3.99
SRSF12-202ENST00000475068 FGD5Q6ZNL6 1462 aa39.95■■■■□ 3.99
SRSF12-202ENST00000475068 CUX1P39880 1505 aa39.91■■■■□ 3.98
SRSF12-202ENST00000475068 WDR97A6NE52 1622 aa39.88■■■■□ 3.97
SRSF12-202ENST00000475068 SNAPC4Q5SXM2 1469 aa39.88■■■■□ 3.97
SRSF12-202ENST00000475068 CLASP1Q7Z460 1538 aa39.78■■■■□ 3.96
SRSF12-202ENST00000475068 MAGI1Q96QZ7 1491 aaPredicted RBP39.76■■■■□ 3.96
SRSF12-202ENST00000475068 CHMP7Q8WUX9 453 aaPredicted RBP39.75■■■■□ 3.95
SRSF12-202ENST00000475068 GRIN2BQ13224 1484 aa39.74■■■■□ 3.95
SRSF12-202ENST00000475068 TRHP20396 242 aaPredicted RBP39.71■■■■□ 3.95
SRSF12-202ENST00000475068 SYNJ1O43426 1573 aa39.67■■■■□ 3.94
SRSF12-202ENST00000475068 SYNJ2O15056 1496 aa39.64■■■■□ 3.94
SRSF12-202ENST00000475068 GAPVD1Q14C86 1478 aa39.57■■■■□ 3.93
SRSF12-202ENST00000475068 PBRM1Q86U86 1689 aa39.53■■■■□ 3.92
SRSF12-202ENST00000475068 ABCA10Q8WWZ4 1543 aa39.5■■■■□ 3.91
SRSF12-202ENST00000475068 ABCA5Q8WWZ7 1642 aa39.46■■■■□ 3.91
SRSF12-202ENST00000475068 SUPT5HO00267 1087 aaKnown RBP39.39■■■■□ 3.9
SRSF12-202ENST00000475068 WRNQ14191 1432 aaPredicted RBP eCLIP39.26■■■■□ 3.88
SRSF12-202ENST00000475068 GRIN2AQ12879 1464 aa39.23■■■■□ 3.87
SRSF12-202ENST00000475068 ERCC6L2Q5T890 1561 aa39.17■■■■□ 3.86
SRSF12-202ENST00000475068 TOP2BQ02880 1626 aa39.17■■■■□ 3.86
SRSF12-202ENST00000475068 BIVM-ERCC5R4GMW8 1640 aa39.16■■■■□ 3.86
SRSF12-202ENST00000475068 ADAMTS12P58397 1594 aa39.15■■■■□ 3.86
SRSF12-202ENST00000475068 NUP160Q12769 1436 aa39.14■■■■□ 3.86
SRSF12-202ENST00000475068 CEP170Q5SW79 1584 aa39.12■■■■□ 3.85
SRSF12-202ENST00000475068 FHAD1B1AJZ9 1412 aa39.06■■■■□ 3.84
SRSF12-202ENST00000475068 SHROOM2Q13796 1616 aa39■■■■□ 3.83
SRSF12-202ENST00000475068 ERICH3Q5RHP9 1530 aa38.99■■■■□ 3.83
SRSF12-202ENST00000475068 PRG4Q92954 1404 aaPredicted RBP38.77■■■■□ 3.8
SRSF12-202ENST00000475068 JPH4Q96JJ6 628 aa38.76■■■■□ 3.8
SRSF12-202ENST00000475068 AEBP2Q6ZN18 517 aaPredicted RBP38.72■■■■□ 3.79
SRSF12-202ENST00000475068 KIF13AQ9H1H9 1805 aa38.61■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms