RNA–Protein interactions for RNA: ENST00000475051.4

TRIM29-202, Transcript of tripartite motif containing 29, humanhuman

TSL 5

Gene TRIM29, Length 1,702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-202ENST00000475051 NISCHQ9Y2I1 1504 aa36.82■■■■□ 3.48
TRIM29-202ENST00000475051 CCDC180Q9P1Z9 1646 aa32.16■■■□□ 2.74
TRIM29-202ENST00000475051 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
TRIM29-202ENST00000475051 DCAF1Q9Y4B6 1507 aa30.47■■■□□ 2.47
TRIM29-202ENST00000475051 DCAF8L2P0C7V8 631 aa30.39■■■□□ 2.46
TRIM29-202ENST00000475051 ABCC9O60706 1549 aa30.38■■■□□ 2.45
TRIM29-202ENST00000475051 MYO15BQ96JP2 1530 aa30.11■■■□□ 2.41
TRIM29-202ENST00000475051 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
TRIM29-202ENST00000475051 NACADO15069 1562 aa29.94■■■□□ 2.38
TRIM29-202ENST00000475051 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
TRIM29-202ENST00000475051 SCRIBQ14160 1630 aa29.54■■■□□ 2.32
TRIM29-202ENST00000475051 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
TRIM29-202ENST00000475051 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
TRIM29-202ENST00000475051 BICRAQ9NZM4 1560 aa28.77■■■□□ 2.2
TRIM29-202ENST00000475051 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
TRIM29-202ENST00000475051 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
TRIM29-202ENST00000475051 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
TRIM29-202ENST00000475051 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.15
TRIM29-202ENST00000475051 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
TRIM29-202ENST00000475051 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
TRIM29-202ENST00000475051 WIZO95785 1651 aa28.22■■■□□ 2.11
TRIM29-202ENST00000475051 PEG3Q9GZU2 1588 aa27.98■■■□□ 2.07
TRIM29-202ENST00000475051 TOP2AP11388 1531 aaKnown RBP27.94■■■□□ 2.06
TRIM29-202ENST00000475051 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
TRIM29-202ENST00000475051 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
TRIM29-202ENST00000475051 ATAD2BQ9ULI0 1458 aa27.84■■■□□ 2.05
TRIM29-202ENST00000475051 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
TRIM29-202ENST00000475051 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
TRIM29-202ENST00000475051 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
TRIM29-202ENST00000475051 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
TRIM29-202ENST00000475051 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
TRIM29-202ENST00000475051 CC2D2AQ9P2K1 1620 aa27.51■■□□□ 1.99
TRIM29-202ENST00000475051 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
TRIM29-202ENST00000475051 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
TRIM29-202ENST00000475051 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
TRIM29-202ENST00000475051 CFTRP13569 1480 aa26.99■■□□□ 1.91
TRIM29-202ENST00000475051 PRDM2Q13029 1718 aa26.92■■□□□ 1.9
TRIM29-202ENST00000475051 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.9
TRIM29-202ENST00000475051 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
TRIM29-202ENST00000475051 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
TRIM29-202ENST00000475051 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.86
TRIM29-202ENST00000475051 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
TRIM29-202ENST00000475051 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
TRIM29-202ENST00000475051 NESP48681 1621 aa26.65■■□□□ 1.86
TRIM29-202ENST00000475051 FAM9AQ8IZU1 332 aaPredicted RBP26.63■■□□□ 1.85
TRIM29-202ENST00000475051 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
TRIM29-202ENST00000475051 CUX1P39880 1505 aa26.59■■□□□ 1.85
TRIM29-202ENST00000475051 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
TRIM29-202ENST00000475051 SOGA1O94964 1423 aa26.52■■□□□ 1.84
TRIM29-202ENST00000475051 EEA1Q15075 1411 aa26.51■■□□□ 1.83
TRIM29-202ENST00000475051 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
TRIM29-202ENST00000475051 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
TRIM29-202ENST00000475051 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
TRIM29-202ENST00000475051 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.81
TRIM29-202ENST00000475051 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
TRIM29-202ENST00000475051 CSRNP3Q8WYN3 585 aa26.34■■□□□ 1.81
TRIM29-202ENST00000475051 TOPBP1Q92547 1522 aa26.33■■□□□ 1.8
TRIM29-202ENST00000475051 FGD5Q6ZNL6 1462 aa26.32■■□□□ 1.8
TRIM29-202ENST00000475051 URB2Q14146 1524 aaKnown RBP26.27■■□□□ 1.8
TRIM29-202ENST00000475051 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
TRIM29-202ENST00000475051 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
TRIM29-202ENST00000475051 POLA1P09884 1462 aaPredicted RBP26.19■■□□□ 1.78
TRIM29-202ENST00000475051 KIF21BO75037 1637 aa26.17■■□□□ 1.78
TRIM29-202ENST00000475051 CUX2O14529 1486 aa26.14■■□□□ 1.77
TRIM29-202ENST00000475051 GOLGA3Q08378 1498 aa26.14■■□□□ 1.77
TRIM29-202ENST00000475051 MRC2Q9UBG0 1479 aa26.14■■□□□ 1.77
TRIM29-202ENST00000475051 RAD54L2Q9Y4B4 1467 aa26.09■■□□□ 1.77
TRIM29-202ENST00000475051 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
TRIM29-202ENST00000475051 ERCC6Q03468 1493 aa26.07■■□□□ 1.76
TRIM29-202ENST00000475051 TNIKQ9UKE5 1360 aa26.04■■□□□ 1.76
TRIM29-202ENST00000475051 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
TRIM29-202ENST00000475051 PRXQ9BXM0 1461 aa26.02■■□□□ 1.76
TRIM29-202ENST00000475051 WDR62O43379 1518 aa26.01■■□□□ 1.75
TRIM29-202ENST00000475051 UBTFP17480 764 aaKnown RBP26■■□□□ 1.75
TRIM29-202ENST00000475051 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
TRIM29-202ENST00000475051 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
TRIM29-202ENST00000475051 IGF1RP08069 1367 aa25.96■■□□□ 1.75
TRIM29-202ENST00000475051 TARBP1Q13395 1621 aaKnown RBP25.94■■□□□ 1.74
TRIM29-202ENST00000475051 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
TRIM29-202ENST00000475051 CEP162Q5TB80 1403 aa25.9■■□□□ 1.74
TRIM29-202ENST00000475051 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.73
TRIM29-202ENST00000475051 TDRD9Q8NDG6 1382 aaKnown RBP25.84■■□□□ 1.73
TRIM29-202ENST00000475051 CARMIL1Q5VZK9 1371 aa25.83■■□□□ 1.73
TRIM29-202ENST00000475051 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
TRIM29-202ENST00000475051 GAPVD1Q14C86 1478 aa25.82■■□□□ 1.72
TRIM29-202ENST00000475051 CUL7Q14999 1698 aa25.81■■□□□ 1.72
TRIM29-202ENST00000475051 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
TRIM29-202ENST00000475051 CLIP1P30622 1438 aa25.71■■□□□ 1.71
TRIM29-202ENST00000475051 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.7
TRIM29-202ENST00000475051 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
TRIM29-202ENST00000475051 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
TRIM29-202ENST00000475051 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
TRIM29-202ENST00000475051 RANGAP1P46060 587 aaPredicted RBP25.57■■□□□ 1.68
TRIM29-202ENST00000475051 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
TRIM29-202ENST00000475051 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
TRIM29-202ENST00000475051 CTTNBP2Q8WZ74 1663 aa25.53■■□□□ 1.68
TRIM29-202ENST00000475051 VPS8Q8N3P4 1428 aa25.48■■□□□ 1.67
TRIM29-202ENST00000475051 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
TRIM29-202ENST00000475051 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
TRIM29-202ENST00000475051 ARHGAP35Q9NRY4 1499 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms