RNA–Protein interactions for RNA: ENST00000475009.1

DSCR3-206, Transcript of Down syndrome critical region protein 3, human

TSL 2

Gene DSCR3, Length 715 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DSCR3-206	ENST00000475009	NISCH	Q9Y2I1	1504 aa		40.04	■■■■■ 4
DSCR3-206	ENST00000475009	CCDC180	Q9P1Z9	1646 aa		35.68	■■■■□ 3.3
DSCR3-206	ENST00000475009	ABCC9	O60706	1549 aa		35.05	■■■■□ 3.2
DSCR3-206	ENST00000475009	RB1CC1	Q8TDY2	1594 aa		33.66	■■■□□ 2.98
DSCR3-206	ENST00000475009	NACAD	O15069	1562 aa		33.6	■■■□□ 2.97
DSCR3-206	ENST00000475009	MYO15B	Q96JP2	1530 aa		33.4	■■■□□ 2.94
DSCR3-206	ENST00000475009	DCAF8L2	P0C7V8	631 aa		33.38	■■■□□ 2.93
DSCR3-206	ENST00000475009	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.31	■■■□□ 2.92
DSCR3-206	ENST00000475009	DCAF1	Q9Y4B6	1507 aa		33.17	■■■□□ 2.9
DSCR3-206	ENST00000475009	UNC13A	Q9UPW8	1703 aa		32.94	■■■□□ 2.86
DSCR3-206	ENST00000475009	BICRA	Q9NZM4	1560 aa		32.71	■■■□□ 2.83
DSCR3-206	ENST00000475009	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
DSCR3-206	ENST00000475009	DNAJC5B	Q9UF47	199 aa		32.46	■■■□□ 2.79
DSCR3-206	ENST00000475009	SCRIB	Q14160	1630 aa		32.46	■■■□□ 2.79
DSCR3-206	ENST00000475009	SHROOM4	Q9ULL8	1493 aa		32.35	■■■□□ 2.77
DSCR3-206	ENST00000475009	EIF4G1	Q04637	1599 aa	Known RBP	31.82	■■■□□ 2.68
DSCR3-206	ENST00000475009	CC2D2A	Q9P2K1	1620 aa		31.75	■■■□□ 2.67
DSCR3-206	ENST00000475009	CECR2	Q9BXF3	1484 aa		31.53	■■■□□ 2.64
DSCR3-206	ENST00000475009	SMARCA4	P51532	1647 aa		31.09	■■■□□ 2.57
DSCR3-206	ENST00000475009	NCAPD3	P42695	1498 aa		31.04	■■■□□ 2.56
DSCR3-206	ENST00000475009	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.02	■■■□□ 2.56
DSCR3-206	ENST00000475009	ATAD2B	Q9ULI0	1458 aa		31.01	■■■□□ 2.55
DSCR3-206	ENST00000475009	SMARCA2	P51531	1590 aa		30.92	■■■□□ 2.54
DSCR3-206	ENST00000475009	PEG3	Q9GZU2	1588 aa		30.86	■■■□□ 2.53
DSCR3-206	ENST00000475009	MROH2B	Q7Z745	1585 aa		30.84	■■■□□ 2.53
DSCR3-206	ENST00000475009	HMGXB3	Q12766	1538 aa		30.83	■■■□□ 2.53
DSCR3-206	ENST00000475009	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.67	■■■□□ 2.5
DSCR3-206	ENST00000475009	WIZ	O95785	1651 aa		30.49	■■■□□ 2.47
DSCR3-206	ENST00000475009	RSF1	Q96T23	1441 aa	Predicted RBP	30.42	■■■□□ 2.46
DSCR3-206	ENST00000475009	NES	P48681	1621 aa		30.3	■■■□□ 2.44
DSCR3-206	ENST00000475009	LAMC3	Q9Y6N6	1575 aa		30.22	■■■□□ 2.43
DSCR3-206	ENST00000475009	ERCC6	Q03468	1493 aa		30.18	■■■□□ 2.42
DSCR3-206	ENST00000475009	TOP2A	P11388	1531 aa	Known RBP	30.15	■■■□□ 2.42
DSCR3-206	ENST00000475009	CADPS	Q9ULU8	1353 aa		30.09	■■■□□ 2.41
DSCR3-206	ENST00000475009	CUX2	O14529	1486 aa		30.03	■■■□□ 2.4
DSCR3-206	ENST00000475009	PDS5B	Q9NTI5	1447 aa		29.99	■■■□□ 2.39
DSCR3-206	ENST00000475009	KIF21A	Q7Z4S6	1674 aa		29.93	■■■□□ 2.38
DSCR3-206	ENST00000475009	THOC2	Q8NI27	1593 aa	Known RBP	29.91	■■■□□ 2.38
DSCR3-206	ENST00000475009	CFTR	P13569	1480 aa		29.88	■■■□□ 2.37
DSCR3-206	ENST00000475009	CCDC88B	A6NC98	1476 aa		29.81	■■■□□ 2.36
DSCR3-206	ENST00000475009	FANCD2	Q9BXW9	1451 aa		29.72	■■■□□ 2.35
DSCR3-206	ENST00000475009	MRC2	Q9UBG0	1479 aa		29.69	■■■□□ 2.34
DSCR3-206	ENST00000475009	CEP164	Q9UPV0	1460 aa		29.68	■■■□□ 2.34
DSCR3-206	ENST00000475009	WDR62	O43379	1518 aa		29.64	■■■□□ 2.34
DSCR3-206	ENST00000475009	PRDM2	Q13029	1718 aa		29.62	■■■□□ 2.33
DSCR3-206	ENST00000475009	URB2	Q14146	1524 aa	Known RBP	29.46	■■■□□ 2.31
DSCR3-206	ENST00000475009	DNAJC5	Q9H3Z4	198 aa		29.46	■■■□□ 2.31
DSCR3-206	ENST00000475009	SUPT5H	O00267	1087 aa	Known RBP	29.37	■■■□□ 2.29
DSCR3-206	ENST00000475009	TOPBP1	Q92547	1522 aa		29.23	■■■□□ 2.27
DSCR3-206	ENST00000475009	ABCC8	Q09428	1581 aa		29.22	■■■□□ 2.27
DSCR3-206	ENST00000475009	DNMBP	Q6XZF7	1577 aa		29.17	■■■□□ 2.26
DSCR3-206	ENST00000475009	IFT140	Q96RY7	1462 aa		29.09	■■■□□ 2.25
DSCR3-206	ENST00000475009	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.99	■■■□□ 2.23
DSCR3-206	ENST00000475009	POLA1	P09884	1462 aa	Predicted RBP	28.97	■■■□□ 2.23
DSCR3-206	ENST00000475009	TARBP1	Q13395	1621 aa	Known RBP	28.97	■■■□□ 2.23
DSCR3-206	ENST00000475009	CUX1	P39880	1505 aa		28.94	■■■□□ 2.22
DSCR3-206	ENST00000475009	FGD5	Q6ZNL6	1462 aa		28.85	■■■□□ 2.21
DSCR3-206	ENST00000475009	EIF4G3	O43432	1585 aa	Known RBP	28.84	■■■□□ 2.21
DSCR3-206	ENST00000475009	SOGA1	O94964	1423 aa		28.84	■■■□□ 2.21
DSCR3-206	ENST00000475009	RAD54L2	Q9Y4B4	1467 aa		28.83	■■■□□ 2.21
DSCR3-206	ENST00000475009	AQR	O60306	1485 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
DSCR3-206	ENST00000475009	OSCAR	Q8IYS5	282 aa		28.72	■■■□□ 2.19
DSCR3-206	ENST00000475009	WDR97	A6NE52	1622 aa		28.72	■■■□□ 2.19
DSCR3-206	ENST00000475009	TDRD9	Q8NDG6	1382 aa	Known RBP	28.68	■■■□□ 2.18
DSCR3-206	ENST00000475009	BIVM-ERCC5	R4GMW8	1640 aa		28.65	■■■□□ 2.18
DSCR3-206	ENST00000475009	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.64	■■■□□ 2.18
DSCR3-206	ENST00000475009	TOP2B	Q02880	1626 aa		28.64	■■■□□ 2.18
DSCR3-206	ENST00000475009	SYNJ1	O43426	1573 aa		28.61	■■■□□ 2.17
DSCR3-206	ENST00000475009	ABCA10	Q8WWZ4	1543 aa		28.59	■■■□□ 2.17
DSCR3-206	ENST00000475009	GRIN2B	Q13224	1484 aa		28.52	■■■□□ 2.16
DSCR3-206	ENST00000475009	CHD1	O14646	1710 aa		28.52	■■■□□ 2.16
DSCR3-206	ENST00000475009	ABCA5	Q8WWZ7	1642 aa		28.51	■■■□□ 2.15
DSCR3-206	ENST00000475009	GAPVD1	Q14C86	1478 aa		28.5	■■■□□ 2.15
DSCR3-206	ENST00000475009	SNAPC4	Q5SXM2	1469 aa		28.49	■■■□□ 2.15
DSCR3-206	ENST00000475009	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.47	■■■□□ 2.15
DSCR3-206	ENST00000475009	PBRM1	Q86U86	1689 aa		28.44	■■■□□ 2.14
DSCR3-206	ENST00000475009	FBLN2	P98095	1184 aa		28.38	■■■□□ 2.13
DSCR3-206	ENST00000475009	SYNJ2	O15056	1496 aa		28.36	■■■□□ 2.13
DSCR3-206	ENST00000475009	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.32	■■■□□ 2.12
DSCR3-206	ENST00000475009	RIMBP3C	A6NJZ7	1639 aa		28.3	■■■□□ 2.12
DSCR3-206	ENST00000475009	RIMBP3B	A6NNM3	1639 aa		28.3	■■■□□ 2.12
DSCR3-206	ENST00000475009	RIMBP3	Q9UFD9	1639 aa		28.3	■■■□□ 2.12
DSCR3-206	ENST00000475009	ARHGEF11	O15085	1522 aa		28.27	■■■□□ 2.12
DSCR3-206	ENST00000475009	ERICH3	Q5RHP9	1530 aa		28.25	■■■□□ 2.11
DSCR3-206	ENST00000475009	CLASP1	Q7Z460	1538 aa		28.25	■■■□□ 2.11
DSCR3-206	ENST00000475009	TRIM41	Q8WV44	630 aa		28.25	■■■□□ 2.11
DSCR3-206	ENST00000475009	ADAMTS12	P58397	1594 aa		28.21	■■■□□ 2.11
DSCR3-206	ENST00000475009	FHAD1	B1AJZ9	1412 aa		28.17	■■■□□ 2.1
DSCR3-206	ENST00000475009	GRIN2A	Q12879	1464 aa		28.16	■■■□□ 2.1
DSCR3-206	ENST00000475009	NUP160	Q12769	1436 aa		28.08	■■■□□ 2.09
DSCR3-206	ENST00000475009	KIF27	Q86VH2	1401 aa		28.05	■■■□□ 2.08
DSCR3-206	ENST00000475009	CEP170	Q5SW79	1584 aa		28.03	■■■□□ 2.08
DSCR3-206	ENST00000475009	ARAP1	Q96P48	1450 aa		28.03	■■■□□ 2.08
DSCR3-206	ENST00000475009	IGF1R	P08069	1367 aa		28.03	■■■□□ 2.08
DSCR3-206	ENST00000475009	CYB5RL	Q6IPT4	315 aa		27.98	■■■□□ 2.07
DSCR3-206	ENST00000475009	CUL7	Q14999	1698 aa		27.92	■■■□□ 2.06
DSCR3-206	ENST00000475009	SHROOM2	Q13796	1616 aa		27.9	■■■□□ 2.06
DSCR3-206	ENST00000475009	ERCC6L2	Q5T890	1561 aa		27.82	■■■□□ 2.04
DSCR3-206	ENST00000475009	CARMIL1	Q5VZK9	1371 aa		27.82	■■■□□ 2.04
DSCR3-206	ENST00000475009	RUSC2	Q8N2Y8	1516 aa		27.81	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms