RNA–Protein interactions for RNA: ENST00000474933.6

TRO-220, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 299 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-220ENST00000474933 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
TRO-220ENST00000474933 CCDC180Q9P1Z9 1646 aa23.79■■□□□ 1.4
TRO-220ENST00000474933 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
TRO-220ENST00000474933 ABCC9O60706 1549 aa22.6■■□□□ 1.21
TRO-220ENST00000474933 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
TRO-220ENST00000474933 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
TRO-220ENST00000474933 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
TRO-220ENST00000474933 NACADO15069 1562 aa22.2■■□□□ 1.14
TRO-220ENST00000474933 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
TRO-220ENST00000474933 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
TRO-220ENST00000474933 SCRIBQ14160 1630 aa21.77■■□□□ 1.07
TRO-220ENST00000474933 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
TRO-220ENST00000474933 BICRAQ9NZM4 1560 aa21.33■■□□□ 1.01
TRO-220ENST00000474933 PABPN1Q86U42 306 aaKnown RBP eCLIP21.2■□□□□ 0.98
TRO-220ENST00000474933 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
TRO-220ENST00000474933 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
TRO-220ENST00000474933 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
TRO-220ENST00000474933 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
TRO-220ENST00000474933 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
TRO-220ENST00000474933 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
TRO-220ENST00000474933 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
TRO-220ENST00000474933 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
TRO-220ENST00000474933 WIZO95785 1651 aa20.66■□□□□ 0.9
TRO-220ENST00000474933 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
TRO-220ENST00000474933 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
TRO-220ENST00000474933 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
TRO-220ENST00000474933 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
TRO-220ENST00000474933 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
TRO-220ENST00000474933 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
TRO-220ENST00000474933 CC2D2AQ9P2K1 1620 aa20.45■□□□□ 0.87
TRO-220ENST00000474933 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
TRO-220ENST00000474933 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
TRO-220ENST00000474933 CFTRP13569 1480 aa19.94■□□□□ 0.78
TRO-220ENST00000474933 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
TRO-220ENST00000474933 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
TRO-220ENST00000474933 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.76
TRO-220ENST00000474933 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
TRO-220ENST00000474933 NESP48681 1621 aa19.74■□□□□ 0.75
TRO-220ENST00000474933 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
TRO-220ENST00000474933 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
TRO-220ENST00000474933 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
TRO-220ENST00000474933 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
TRO-220ENST00000474933 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
TRO-220ENST00000474933 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
TRO-220ENST00000474933 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
TRO-220ENST00000474933 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
TRO-220ENST00000474933 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
TRO-220ENST00000474933 CUX1P39880 1505 aa19.56■□□□□ 0.72
TRO-220ENST00000474933 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
TRO-220ENST00000474933 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
TRO-220ENST00000474933 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
TRO-220ENST00000474933 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
TRO-220ENST00000474933 MRC2Q9UBG0 1479 aa19.45■□□□□ 0.7
TRO-220ENST00000474933 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
TRO-220ENST00000474933 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
TRO-220ENST00000474933 EEA1Q15075 1411 aa19.37■□□□□ 0.69
TRO-220ENST00000474933 WDR62O43379 1518 aa19.35■□□□□ 0.69
TRO-220ENST00000474933 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
TRO-220ENST00000474933 SOGA1O94964 1423 aa19.32■□□□□ 0.68
TRO-220ENST00000474933 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
TRO-220ENST00000474933 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
TRO-220ENST00000474933 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
TRO-220ENST00000474933 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
TRO-220ENST00000474933 RUSC2Q8N2Y8 1516 aa19.23■□□□□ 0.67
TRO-220ENST00000474933 CUX2O14529 1486 aa19.22■□□□□ 0.67
TRO-220ENST00000474933 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
TRO-220ENST00000474933 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
TRO-220ENST00000474933 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
TRO-220ENST00000474933 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
TRO-220ENST00000474933 TARBP1Q13395 1621 aaKnown RBP19.16■□□□□ 0.66
TRO-220ENST00000474933 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
TRO-220ENST00000474933 KIF21BO75037 1637 aa19.09■□□□□ 0.65
TRO-220ENST00000474933 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
TRO-220ENST00000474933 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
TRO-220ENST00000474933 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
TRO-220ENST00000474933 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
TRO-220ENST00000474933 IGF1RP08069 1367 aa19.04■□□□□ 0.64
TRO-220ENST00000474933 LOC105371045A0A1W2PR82 267 aa19.03■□□□□ 0.64
TRO-220ENST00000474933 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
TRO-220ENST00000474933 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
TRO-220ENST00000474933 CUL7Q14999 1698 aa18.99■□□□□ 0.63
TRO-220ENST00000474933 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
TRO-220ENST00000474933 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
TRO-220ENST00000474933 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
TRO-220ENST00000474933 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRO-220ENST00000474933 CARMIL1Q5VZK9 1371 aa18.96■□□□□ 0.63
TRO-220ENST00000474933 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
TRO-220ENST00000474933 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
TRO-220ENST00000474933 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
TRO-220ENST00000474933 ADAMTS12P58397 1594 aa18.89■□□□□ 0.62
TRO-220ENST00000474933 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
TRO-220ENST00000474933 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
TRO-220ENST00000474933 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
TRO-220ENST00000474933 SNAPC4Q5SXM2 1469 aa18.85■□□□□ 0.61
TRO-220ENST00000474933 CEP162Q5TB80 1403 aa18.8■□□□□ 0.6
TRO-220ENST00000474933 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
TRO-220ENST00000474933 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
TRO-220ENST00000474933 CLIP1P30622 1438 aa18.71■□□□□ 0.59
TRO-220ENST00000474933 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
TRO-220ENST00000474933 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms