RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
DNMT3A-211ENST00000474887 CCDC180Q9P1Z9 1646 aa30.97■■■□□ 2.55
DNMT3A-211ENST00000474887 ABCC9O60706 1549 aa30.67■■■□□ 2.5
DNMT3A-211ENST00000474887 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
DNMT3A-211ENST00000474887 NACADO15069 1562 aa29.3■■■□□ 2.28
DNMT3A-211ENST00000474887 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
DNMT3A-211ENST00000474887 MYO15BQ96JP2 1530 aa29.07■■■□□ 2.24
DNMT3A-211ENST00000474887 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
DNMT3A-211ENST00000474887 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
DNMT3A-211ENST00000474887 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
DNMT3A-211ENST00000474887 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
DNMT3A-211ENST00000474887 UNC13AQ9UPW8 1703 aa28.51■■■□□ 2.15
DNMT3A-211ENST00000474887 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
DNMT3A-211ENST00000474887 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
DNMT3A-211ENST00000474887 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
DNMT3A-211ENST00000474887 EIF4G1Q04637 1599 aaKnown RBP27.75■■■□□ 2.03
DNMT3A-211ENST00000474887 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
DNMT3A-211ENST00000474887 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
DNMT3A-211ENST00000474887 NCAPD3P42695 1498 aa27.07■■□□□ 1.92
DNMT3A-211ENST00000474887 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
DNMT3A-211ENST00000474887 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
DNMT3A-211ENST00000474887 SMARCA4P51532 1647 aa26.91■■□□□ 1.9
DNMT3A-211ENST00000474887 BAZ1AQ9NRL2 1556 aaPredicted RBP26.9■■□□□ 1.9
DNMT3A-211ENST00000474887 HMGXB3Q12766 1538 aa26.83■■□□□ 1.89
DNMT3A-211ENST00000474887 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
DNMT3A-211ENST00000474887 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
DNMT3A-211ENST00000474887 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
DNMT3A-211ENST00000474887 ERCC6Q03468 1493 aa26.54■■□□□ 1.84
DNMT3A-211ENST00000474887 CUX2O14529 1486 aa26.48■■□□□ 1.83
DNMT3A-211ENST00000474887 NESP48681 1621 aa26.37■■□□□ 1.81
DNMT3A-211ENST00000474887 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
DNMT3A-211ENST00000474887 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
DNMT3A-211ENST00000474887 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
DNMT3A-211ENST00000474887 WIZO95785 1651 aa26.25■■□□□ 1.79
DNMT3A-211ENST00000474887 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
DNMT3A-211ENST00000474887 DNAJC5Q9H3Z4 198 aa26.23■■□□□ 1.79
DNMT3A-211ENST00000474887 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
DNMT3A-211ENST00000474887 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
DNMT3A-211ENST00000474887 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
DNMT3A-211ENST00000474887 CFTRP13569 1480 aa25.98■■□□□ 1.75
DNMT3A-211ENST00000474887 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
DNMT3A-211ENST00000474887 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.73
DNMT3A-211ENST00000474887 FANCD2Q9BXW9 1451 aa25.88■■□□□ 1.73
DNMT3A-211ENST00000474887 WDR62O43379 1518 aa25.85■■□□□ 1.73
DNMT3A-211ENST00000474887 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
DNMT3A-211ENST00000474887 URB2Q14146 1524 aaKnown RBP25.59■■□□□ 1.69
DNMT3A-211ENST00000474887 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
DNMT3A-211ENST00000474887 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
DNMT3A-211ENST00000474887 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
DNMT3A-211ENST00000474887 TOPBP1Q92547 1522 aa25.4■■□□□ 1.66
DNMT3A-211ENST00000474887 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
DNMT3A-211ENST00000474887 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
DNMT3A-211ENST00000474887 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
DNMT3A-211ENST00000474887 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
DNMT3A-211ENST00000474887 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
DNMT3A-211ENST00000474887 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
DNMT3A-211ENST00000474887 SOGA1O94964 1423 aa25.11■■□□□ 1.61
DNMT3A-211ENST00000474887 AQRO60306 1485 aaKnown RBP eCLIP25.07■■□□□ 1.62e-7■■■□□ 18.4
DNMT3A-211ENST00000474887 EIF4G3O43432 1585 aaKnown RBP25.06■■□□□ 1.6
DNMT3A-211ENST00000474887 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
DNMT3A-211ENST00000474887 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
DNMT3A-211ENST00000474887 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
DNMT3A-211ENST00000474887 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
DNMT3A-211ENST00000474887 CUX1P39880 1505 aa25■■□□□ 1.59
DNMT3A-211ENST00000474887 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
DNMT3A-211ENST00000474887 FBLN2P98095 1184 aa24.89■■□□□ 1.58
DNMT3A-211ENST00000474887 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
DNMT3A-211ENST00000474887 MAGI1Q96QZ7 1491 aaPredicted RBP24.85■■□□□ 1.57
DNMT3A-211ENST00000474887 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
DNMT3A-211ENST00000474887 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
DNMT3A-211ENST00000474887 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
DNMT3A-211ENST00000474887 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
DNMT3A-211ENST00000474887 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
DNMT3A-211ENST00000474887 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
DNMT3A-211ENST00000474887 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
DNMT3A-211ENST00000474887 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
DNMT3A-211ENST00000474887 CHD1O14646 1710 aa24.78■■□□□ 1.56
DNMT3A-211ENST00000474887 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
DNMT3A-211ENST00000474887 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
DNMT3A-211ENST00000474887 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
DNMT3A-211ENST00000474887 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
DNMT3A-211ENST00000474887 CYB5RLQ6IPT4 315 aa24.67■■□□□ 1.54
DNMT3A-211ENST00000474887 BIVM-ERCC5R4GMW8 1640 aa24.66■■□□□ 1.54
DNMT3A-211ENST00000474887 ABCA5Q8WWZ7 1642 aa24.65■■□□□ 1.54
DNMT3A-211ENST00000474887 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
DNMT3A-211ENST00000474887 PBRM1Q86U86 1689 aa24.6■■□□□ 1.53
DNMT3A-211ENST00000474887 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
DNMT3A-211ENST00000474887 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
DNMT3A-211ENST00000474887 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
DNMT3A-211ENST00000474887 GRIN2AQ12879 1464 aa24.5■■□□□ 1.51
DNMT3A-211ENST00000474887 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
DNMT3A-211ENST00000474887 NUP160Q12769 1436 aa24.44■■□□□ 1.5
DNMT3A-211ENST00000474887 KIF27Q86VH2 1401 aa24.33■■□□□ 1.49
DNMT3A-211ENST00000474887 TRHP20396 242 aaPredicted RBP24.32■■□□□ 1.48
DNMT3A-211ENST00000474887 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
DNMT3A-211ENST00000474887 IGF1RP08069 1367 aa24.28■■□□□ 1.48
DNMT3A-211ENST00000474887 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
DNMT3A-211ENST00000474887 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
DNMT3A-211ENST00000474887 PRG4Q92954 1404 aaPredicted RBP24.17■■□□□ 1.46
DNMT3A-211ENST00000474887 CUL7Q14999 1698 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms