RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
ARPC1B-216ENST00000474880 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
ARPC1B-216ENST00000474880 ABCC9O60706 1549 aa24.07■■□□□ 1.44
ARPC1B-216ENST00000474880 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
ARPC1B-216ENST00000474880 NACADO15069 1562 aa22.92■■□□□ 1.26
ARPC1B-216ENST00000474880 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
ARPC1B-216ENST00000474880 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
ARPC1B-216ENST00000474880 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
ARPC1B-216ENST00000474880 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
ARPC1B-216ENST00000474880 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
ARPC1B-216ENST00000474880 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
ARPC1B-216ENST00000474880 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
ARPC1B-216ENST00000474880 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
ARPC1B-216ENST00000474880 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
ARPC1B-216ENST00000474880 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
ARPC1B-216ENST00000474880 CC2D2AQ9P2K1 1620 aa21.78■■□□□ 1.08
ARPC1B-216ENST00000474880 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
ARPC1B-216ENST00000474880 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.05
ARPC1B-216ENST00000474880 SMARCA4P51532 1647 aa21.19■□□□□ 0.98
ARPC1B-216ENST00000474880 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
ARPC1B-216ENST00000474880 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
ARPC1B-216ENST00000474880 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
ARPC1B-216ENST00000474880 SMARCA2P51531 1590 aa21.07■□□□□ 0.96
ARPC1B-216ENST00000474880 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
ARPC1B-216ENST00000474880 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
ARPC1B-216ENST00000474880 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
ARPC1B-216ENST00000474880 BAZ1BQ9UIG0 1483 aaKnown RBP20.92■□□□□ 0.94
ARPC1B-216ENST00000474880 WIZO95785 1651 aa20.77■□□□□ 0.92
ARPC1B-216ENST00000474880 NESP48681 1621 aa20.77■□□□□ 0.92
ARPC1B-216ENST00000474880 ERCC6Q03468 1493 aa20.74■□□□□ 0.91
ARPC1B-216ENST00000474880 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
ARPC1B-216ENST00000474880 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
ARPC1B-216ENST00000474880 CUX2O14529 1486 aa20.62■□□□□ 0.89
ARPC1B-216ENST00000474880 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
ARPC1B-216ENST00000474880 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
ARPC1B-216ENST00000474880 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
ARPC1B-216ENST00000474880 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
ARPC1B-216ENST00000474880 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
ARPC1B-216ENST00000474880 CFTRP13569 1480 aa20.34■□□□□ 0.85
ARPC1B-216ENST00000474880 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
ARPC1B-216ENST00000474880 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
ARPC1B-216ENST00000474880 FANCD2Q9BXW9 1451 aa20.29■□□□□ 0.84
ARPC1B-216ENST00000474880 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
ARPC1B-216ENST00000474880 WDR62O43379 1518 aa20.27■□□□□ 0.83
ARPC1B-216ENST00000474880 CCDC88BA6NC98 1476 aa20.25■□□□□ 0.83
ARPC1B-216ENST00000474880 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
ARPC1B-216ENST00000474880 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
ARPC1B-216ENST00000474880 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
ARPC1B-216ENST00000474880 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
ARPC1B-216ENST00000474880 DNMBPQ6XZF7 1577 aa19.89■□□□□ 0.77
ARPC1B-216ENST00000474880 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
ARPC1B-216ENST00000474880 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
ARPC1B-216ENST00000474880 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.77
ARPC1B-216ENST00000474880 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
ARPC1B-216ENST00000474880 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
ARPC1B-216ENST00000474880 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
ARPC1B-216ENST00000474880 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
ARPC1B-216ENST00000474880 CUX1P39880 1505 aa19.71■□□□□ 0.75
ARPC1B-216ENST00000474880 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
ARPC1B-216ENST00000474880 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■■■ 27
ARPC1B-216ENST00000474880 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
ARPC1B-216ENST00000474880 SOGA1O94964 1423 aa19.65■□□□□ 0.74
ARPC1B-216ENST00000474880 CHD1O14646 1710 aa19.59■□□□□ 0.73
ARPC1B-216ENST00000474880 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
ARPC1B-216ENST00000474880 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
ARPC1B-216ENST00000474880 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
ARPC1B-216ENST00000474880 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
ARPC1B-216ENST00000474880 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
ARPC1B-216ENST00000474880 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
ARPC1B-216ENST00000474880 FBLN2P98095 1184 aa19.47■□□□□ 0.71
ARPC1B-216ENST00000474880 SNAPC4Q5SXM2 1469 aa19.47■□□□□ 0.71
ARPC1B-216ENST00000474880 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
ARPC1B-216ENST00000474880 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
ARPC1B-216ENST00000474880 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
ARPC1B-216ENST00000474880 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
ARPC1B-216ENST00000474880 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
ARPC1B-216ENST00000474880 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
ARPC1B-216ENST00000474880 WRNQ14191 1432 aaPredicted RBP eCLIP19.43■□□□□ 0.7
ARPC1B-216ENST00000474880 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
ARPC1B-216ENST00000474880 GAPVD1Q14C86 1478 aa19.42■□□□□ 0.7
ARPC1B-216ENST00000474880 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
ARPC1B-216ENST00000474880 ARHGEF11O15085 1522 aa19.42■□□□□ 0.7
ARPC1B-216ENST00000474880 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
ARPC1B-216ENST00000474880 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
ARPC1B-216ENST00000474880 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
ARPC1B-216ENST00000474880 ADAMTS12P58397 1594 aa19.25■□□□□ 0.67
ARPC1B-216ENST00000474880 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
ARPC1B-216ENST00000474880 CYB5RLQ6IPT4 315 aa19.25■□□□□ 0.67
ARPC1B-216ENST00000474880 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
ARPC1B-216ENST00000474880 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
ARPC1B-216ENST00000474880 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
ARPC1B-216ENST00000474880 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
ARPC1B-216ENST00000474880 NUP160Q12769 1436 aa19.13■□□□□ 0.65
ARPC1B-216ENST00000474880 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
ARPC1B-216ENST00000474880 SHROOM2Q13796 1616 aa19.06■□□□□ 0.64
ARPC1B-216ENST00000474880 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
ARPC1B-216ENST00000474880 IGF1RP08069 1367 aa19.02■□□□□ 0.64
ARPC1B-216ENST00000474880 CUL7Q14999 1698 aa18.99■□□□□ 0.63
ARPC1B-216ENST00000474880 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
ARPC1B-216ENST00000474880 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms