RNA–Protein interactions for RNA: ENST00000474815.2

COMMD7-203, Transcript of COMM domain containing 7, humanhuman

TSL 5

Gene COMMD7, Length 488 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-203ENST00000474815 NISCHQ9Y2I1 1504 aa42.49■■■■■ 4.39
COMMD7-203ENST00000474815 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.71
COMMD7-203ENST00000474815 ABCC9O60706 1549 aa38.16■■■■□ 3.7
COMMD7-203ENST00000474815 RB1CC1Q8TDY2 1594 aa36.34■■■■□ 3.41
COMMD7-203ENST00000474815 NACADO15069 1562 aa36.11■■■■□ 3.37
COMMD7-203ENST00000474815 DNAJC5BQ9UF47 199 aa36■■■■□ 3.35
COMMD7-203ENST00000474815 MYO15BQ96JP2 1530 aa35.68■■■■□ 3.3
COMMD7-203ENST00000474815 UNC13AQ9UPW8 1703 aa35.64■■■■□ 3.3
COMMD7-203ENST00000474815 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
COMMD7-203ENST00000474815 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
COMMD7-203ENST00000474815 BICRAQ9NZM4 1560 aa35.41■■■■□ 3.26
COMMD7-203ENST00000474815 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
COMMD7-203ENST00000474815 DCAF1Q9Y4B6 1507 aa35.16■■■■□ 3.22
COMMD7-203ENST00000474815 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
COMMD7-203ENST00000474815 SCRIBQ14160 1630 aa34.68■■■■□ 3.14
COMMD7-203ENST00000474815 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
COMMD7-203ENST00000474815 EIF4G1Q04637 1599 aaKnown RBP34.47■■■■□ 3.11
COMMD7-203ENST00000474815 CECR2Q9BXF3 1484 aa34.42■■■■□ 3.1
COMMD7-203ENST00000474815 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
COMMD7-203ENST00000474815 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
COMMD7-203ENST00000474815 SMARCA4P51532 1647 aa33.16■■■□□ 2.9
COMMD7-203ENST00000474815 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
COMMD7-203ENST00000474815 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
COMMD7-203ENST00000474815 SMARCA2P51531 1590 aa33.09■■■□□ 2.89
COMMD7-203ENST00000474815 CUX2O14529 1486 aa33.01■■■□□ 2.88
COMMD7-203ENST00000474815 BAZ1AQ9NRL2 1556 aaPredicted RBP32.95■■■□□ 2.86
COMMD7-203ENST00000474815 PEG3Q9GZU2 1588 aa32.93■■■□□ 2.86
COMMD7-203ENST00000474815 ERCC6Q03468 1493 aa32.89■■■□□ 2.86
COMMD7-203ENST00000474815 BAZ1BQ9UIG0 1483 aaKnown RBP32.81■■■□□ 2.84
COMMD7-203ENST00000474815 NESP48681 1621 aa32.81■■■□□ 2.84
COMMD7-203ENST00000474815 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
COMMD7-203ENST00000474815 LAMC3Q9Y6N6 1575 aa32.6■■■□□ 2.81
COMMD7-203ENST00000474815 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
COMMD7-203ENST00000474815 KIF21AQ7Z4S6 1674 aa32.41■■■□□ 2.78
COMMD7-203ENST00000474815 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
COMMD7-203ENST00000474815 WIZO95785 1651 aa32.31■■■□□ 2.76
COMMD7-203ENST00000474815 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
COMMD7-203ENST00000474815 MRC2Q9UBG0 1479 aa32.1■■■□□ 2.73
COMMD7-203ENST00000474815 WDR62O43379 1518 aa32.09■■■□□ 2.73
COMMD7-203ENST00000474815 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
COMMD7-203ENST00000474815 CFTRP13569 1480 aa31.95■■■□□ 2.7
COMMD7-203ENST00000474815 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
COMMD7-203ENST00000474815 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
COMMD7-203ENST00000474815 FANCD2Q9BXW9 1451 aa31.9■■■□□ 2.7
COMMD7-203ENST00000474815 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.66
COMMD7-203ENST00000474815 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
COMMD7-203ENST00000474815 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
COMMD7-203ENST00000474815 TRIM41Q8WV44 630 aa31.39■■■□□ 2.62
COMMD7-203ENST00000474815 OSCARQ8IYS5 282 aa31.38■■■□□ 2.61
COMMD7-203ENST00000474815 IFT140Q96RY7 1462 aa31.32■■■□□ 2.6
COMMD7-203ENST00000474815 TOPBP1Q92547 1522 aa31.31■■■□□ 2.6
COMMD7-203ENST00000474815 ZNF608Q9ULD9 1512 aaPredicted RBP31.29■■■□□ 2.6
COMMD7-203ENST00000474815 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
COMMD7-203ENST00000474815 DNMBPQ6XZF7 1577 aa31.18■■■□□ 2.58
COMMD7-203ENST00000474815 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
COMMD7-203ENST00000474815 TARBP1Q13395 1621 aaKnown RBP31.1■■■□□ 2.57
COMMD7-203ENST00000474815 RIMBP3CA6NJZ7 1639 aa31.09■■■□□ 2.57
COMMD7-203ENST00000474815 RIMBP3BA6NNM3 1639 aa31.09■■■□□ 2.57
COMMD7-203ENST00000474815 RIMBP3Q9UFD9 1639 aa31.09■■■□□ 2.57
COMMD7-203ENST00000474815 POLA1P09884 1462 aaPredicted RBP30.99■■■□□ 2.55
COMMD7-203ENST00000474815 ARHGEF11O15085 1522 aa30.97■■■□□ 2.55
COMMD7-203ENST00000474815 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.559e-11■■■■■ 29.6
COMMD7-203ENST00000474815 CHD1O14646 1710 aa30.91■■■□□ 2.54
COMMD7-203ENST00000474815 RAD54L2Q9Y4B4 1467 aa30.83■■■□□ 2.53
COMMD7-203ENST00000474815 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
COMMD7-203ENST00000474815 SOGA1O94964 1423 aa30.78■■■□□ 2.52
COMMD7-203ENST00000474815 CUX1P39880 1505 aa30.75■■■□□ 2.51
COMMD7-203ENST00000474815 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
COMMD7-203ENST00000474815 TDRD9Q8NDG6 1382 aaKnown RBP30.72■■■□□ 2.51
COMMD7-203ENST00000474815 ARAP1Q96P48 1450 aa30.68■■■□□ 2.5
COMMD7-203ENST00000474815 SNAPC4Q5SXM2 1469 aa30.64■■■□□ 2.5
COMMD7-203ENST00000474815 CLASP1Q7Z460 1538 aa30.62■■■□□ 2.49
COMMD7-203ENST00000474815 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
COMMD7-203ENST00000474815 MAGI1Q96QZ7 1491 aaPredicted RBP30.6■■■□□ 2.49
COMMD7-203ENST00000474815 FBLN2P98095 1184 aa30.59■■■□□ 2.49
COMMD7-203ENST00000474815 GRIN2BQ13224 1484 aa30.55■■■□□ 2.48
COMMD7-203ENST00000474815 SYNJ2O15056 1496 aa30.49■■■□□ 2.47
COMMD7-203ENST00000474815 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
COMMD7-203ENST00000474815 PBRM1Q86U86 1689 aa30.46■■■□□ 2.47
COMMD7-203ENST00000474815 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
COMMD7-203ENST00000474815 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
COMMD7-203ENST00000474815 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
COMMD7-203ENST00000474815 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
COMMD7-203ENST00000474815 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.43
COMMD7-203ENST00000474815 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
COMMD7-203ENST00000474815 TOP2BQ02880 1626 aa30.24■■■□□ 2.43
COMMD7-203ENST00000474815 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.43
COMMD7-203ENST00000474815 TRHP20396 242 aaPredicted RBP30.21■■■□□ 2.43
COMMD7-203ENST00000474815 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
COMMD7-203ENST00000474815 ADAMTS12P58397 1594 aa30.18■■■□□ 2.42
COMMD7-203ENST00000474815 NUP160Q12769 1436 aa30.13■■■□□ 2.41
COMMD7-203ENST00000474815 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
COMMD7-203ENST00000474815 ERCC6L2Q5T890 1561 aa30.1■■■□□ 2.41
COMMD7-203ENST00000474815 SHROOM2Q13796 1616 aa30.06■■■□□ 2.4
COMMD7-203ENST00000474815 ERICH3Q5RHP9 1530 aa30.05■■■□□ 2.4
COMMD7-203ENST00000474815 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
COMMD7-203ENST00000474815 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.36
COMMD7-203ENST00000474815 PRG4Q92954 1404 aaPredicted RBP29.75■■■□□ 2.35
COMMD7-203ENST00000474815 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
COMMD7-203ENST00000474815 KIF13AQ9H1H9 1805 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms