RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 NISCHQ9Y2I1 1504 aa45.72■■■■■ 4.91
DNMT3A-210ENST00000474807 CCDC180Q9P1Z9 1646 aa40.86■■■■■ 4.13
DNMT3A-210ENST00000474807 ABCC9O60706 1549 aa40.54■■■■■ 4.08
DNMT3A-210ENST00000474807 RB1CC1Q8TDY2 1594 aa38.74■■■■□ 3.79
DNMT3A-210ENST00000474807 NACADO15069 1562 aa38.57■■■■□ 3.76
DNMT3A-210ENST00000474807 DCAF8L2P0C7V8 631 aa38.39■■■■□ 3.74
DNMT3A-210ENST00000474807 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
DNMT3A-210ENST00000474807 ZCCHC6Q5VYS8 1495 aaKnown RBP37.96■■■■□ 3.67
DNMT3A-210ENST00000474807 UNC13AQ9UPW8 1703 aa37.88■■■■□ 3.65
DNMT3A-210ENST00000474807 DCAF1Q9Y4B6 1507 aa37.81■■■■□ 3.64
DNMT3A-210ENST00000474807 PABPN1Q86U42 306 aaKnown RBP eCLIP37.8■■■■□ 3.64
DNMT3A-210ENST00000474807 DNAJC5BQ9UF47 199 aa37.78■■■■□ 3.64
DNMT3A-210ENST00000474807 BICRAQ9NZM4 1560 aa37.63■■■■□ 3.61
DNMT3A-210ENST00000474807 SCRIBQ14160 1630 aa37.24■■■■□ 3.55
DNMT3A-210ENST00000474807 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
DNMT3A-210ENST00000474807 EIF4G1Q04637 1599 aaKnown RBP36.67■■■■□ 3.46
DNMT3A-210ENST00000474807 CC2D2AQ9P2K1 1620 aa36.66■■■■□ 3.46
DNMT3A-210ENST00000474807 CECR2Q9BXF3 1484 aa36.5■■■■□ 3.43
DNMT3A-210ENST00000474807 NCAPD3P42695 1498 aa35.62■■■■□ 3.29
DNMT3A-210ENST00000474807 SMARCA4P51532 1647 aa35.57■■■■□ 3.29
DNMT3A-210ENST00000474807 ATAD2BQ9ULI0 1458 aa35.55■■■■□ 3.28
DNMT3A-210ENST00000474807 BAZ1AQ9NRL2 1556 aaPredicted RBP35.46■■■■□ 3.27
DNMT3A-210ENST00000474807 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
DNMT3A-210ENST00000474807 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
DNMT3A-210ENST00000474807 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
DNMT3A-210ENST00000474807 MROH2BQ7Z745 1585 aa35.22■■■■□ 3.23
DNMT3A-210ENST00000474807 BAZ1BQ9UIG0 1483 aaKnown RBP35.2■■■■□ 3.23
DNMT3A-210ENST00000474807 ERCC6Q03468 1493 aa34.96■■■■□ 3.19
DNMT3A-210ENST00000474807 NESP48681 1621 aa34.93■■■■□ 3.18
DNMT3A-210ENST00000474807 CUX2O14529 1486 aa34.82■■■■□ 3.16
DNMT3A-210ENST00000474807 WIZO95785 1651 aa34.81■■■■□ 3.16
DNMT3A-210ENST00000474807 LAMC3Q9Y6N6 1575 aa34.74■■■■□ 3.15
DNMT3A-210ENST00000474807 RSF1Q96T23 1441 aaPredicted RBP34.62■■■■□ 3.13
DNMT3A-210ENST00000474807 CADPSQ9ULU8 1353 aa34.54■■■■□ 3.12
DNMT3A-210ENST00000474807 PDS5BQ9NTI5 1447 aa34.53■■■■□ 3.12
DNMT3A-210ENST00000474807 THOC2Q8NI27 1593 aaKnown RBP34.52■■■■□ 3.12
DNMT3A-210ENST00000474807 KIF21AQ7Z4S6 1674 aa34.48■■■■□ 3.11
DNMT3A-210ENST00000474807 DNAJC5Q9H3Z4 198 aa34.44■■■■□ 3.1
DNMT3A-210ENST00000474807 TOP2AP11388 1531 aaKnown RBP34.4■■■■□ 3.1
DNMT3A-210ENST00000474807 CFTRP13569 1480 aa34.22■■■■□ 3.07
DNMT3A-210ENST00000474807 MRC2Q9UBG0 1479 aa34.2■■■■□ 3.07
DNMT3A-210ENST00000474807 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
DNMT3A-210ENST00000474807 WDR62O43379 1518 aa34.13■■■■□ 3.05
DNMT3A-210ENST00000474807 CEP164Q9UPV0 1460 aa34.13■■■■□ 3.05
DNMT3A-210ENST00000474807 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.04
DNMT3A-210ENST00000474807 PRDM2Q13029 1718 aa33.88■■■■□ 3.01
DNMT3A-210ENST00000474807 URB2Q14146 1524 aaKnown RBP33.84■■■■□ 3.01
DNMT3A-210ENST00000474807 TOPBP1Q92547 1522 aa33.53■■■□□ 2.96
DNMT3A-210ENST00000474807 ABCC8Q09428 1581 aa33.48■■■□□ 2.95
DNMT3A-210ENST00000474807 IFT140Q96RY7 1462 aa33.45■■■□□ 2.95
DNMT3A-210ENST00000474807 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
DNMT3A-210ENST00000474807 ZNF608Q9ULD9 1512 aaPredicted RBP33.37■■■□□ 2.93
DNMT3A-210ENST00000474807 SUPT5HO00267 1087 aaKnown RBP33.28■■■□□ 2.92
DNMT3A-210ENST00000474807 OSCARQ8IYS5 282 aa33.28■■■□□ 2.92
DNMT3A-210ENST00000474807 TARBP1Q13395 1621 aaKnown RBP33.22■■■□□ 2.91
DNMT3A-210ENST00000474807 POLA1P09884 1462 aaPredicted RBP33.21■■■□□ 2.91
DNMT3A-210ENST00000474807 EIF4G3O43432 1585 aaKnown RBP33.19■■■□□ 2.9
DNMT3A-210ENST00000474807 AQRO60306 1485 aaKnown RBP eCLIP33.11■■■□□ 2.892e-9■■■■■ 39.1
DNMT3A-210ENST00000474807 RAD54L2Q9Y4B4 1467 aa33.08■■■□□ 2.89
DNMT3A-210ENST00000474807 CUX1P39880 1505 aa33.07■■■□□ 2.88
DNMT3A-210ENST00000474807 SOGA1O94964 1423 aa33.06■■■□□ 2.88
DNMT3A-210ENST00000474807 FGD5Q6ZNL6 1462 aa33.04■■■□□ 2.88
DNMT3A-210ENST00000474807 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
DNMT3A-210ENST00000474807 TDRD9Q8NDG6 1382 aaKnown RBP32.95■■■□□ 2.86
DNMT3A-210ENST00000474807 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
DNMT3A-210ENST00000474807 CHD1O14646 1710 aa32.87■■■□□ 2.85
DNMT3A-210ENST00000474807 RIMBP3CA6NJZ7 1639 aa32.8■■■□□ 2.84
DNMT3A-210ENST00000474807 RIMBP3BA6NNM3 1639 aa32.8■■■□□ 2.84
DNMT3A-210ENST00000474807 RIMBP3Q9UFD9 1639 aa32.8■■■□□ 2.84
DNMT3A-210ENST00000474807 FBLN2P98095 1184 aa32.78■■■□□ 2.84
DNMT3A-210ENST00000474807 SNAPC4Q5SXM2 1469 aa32.77■■■□□ 2.84
DNMT3A-210ENST00000474807 ARHGEF11O15085 1522 aa32.75■■■□□ 2.83
DNMT3A-210ENST00000474807 GRIN2BQ13224 1484 aa32.73■■■□□ 2.83
DNMT3A-210ENST00000474807 MAGI1Q96QZ7 1491 aaPredicted RBP32.7■■■□□ 2.83
DNMT3A-210ENST00000474807 ABCA10Q8WWZ4 1543 aa32.7■■■□□ 2.83
DNMT3A-210ENST00000474807 GAPVD1Q14C86 1478 aa32.66■■■□□ 2.82
DNMT3A-210ENST00000474807 WRNQ14191 1432 aaPredicted RBP eCLIP32.64■■■□□ 2.82
DNMT3A-210ENST00000474807 TOP2BQ02880 1626 aa32.63■■■□□ 2.81
DNMT3A-210ENST00000474807 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
DNMT3A-210ENST00000474807 CHMP7Q8WUX9 453 aaPredicted RBP32.62■■■□□ 2.81
DNMT3A-210ENST00000474807 PBRM1Q86U86 1689 aa32.62■■■□□ 2.81
DNMT3A-210ENST00000474807 ABCA5Q8WWZ7 1642 aa32.62■■■□□ 2.81
DNMT3A-210ENST00000474807 SYNJ1O43426 1573 aa32.6■■■□□ 2.81
DNMT3A-210ENST00000474807 SYNJ2O15056 1496 aa32.59■■■□□ 2.81
DNMT3A-210ENST00000474807 CLASP1Q7Z460 1538 aa32.53■■■□□ 2.8
DNMT3A-210ENST00000474807 CYB5RLQ6IPT4 315 aa32.47■■■□□ 2.79
DNMT3A-210ENST00000474807 ARAP1Q96P48 1450 aa32.45■■■□□ 2.79
DNMT3A-210ENST00000474807 ADAMTS12P58397 1594 aa32.33■■■□□ 2.77
DNMT3A-210ENST00000474807 GRIN2AQ12879 1464 aa32.32■■■□□ 2.76
DNMT3A-210ENST00000474807 ERICH3Q5RHP9 1530 aa32.29■■■□□ 2.76
DNMT3A-210ENST00000474807 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.76
DNMT3A-210ENST00000474807 NUP160Q12769 1436 aa32.21■■■□□ 2.75
DNMT3A-210ENST00000474807 CEP170Q5SW79 1584 aa32.19■■■□□ 2.74
DNMT3A-210ENST00000474807 ERCC6L2Q5T890 1561 aa32.04■■■□□ 2.72
DNMT3A-210ENST00000474807 SHROOM2Q13796 1616 aa32.03■■■□□ 2.72
DNMT3A-210ENST00000474807 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
DNMT3A-210ENST00000474807 TRHP20396 242 aaPredicted RBP31.98■■■□□ 2.71
DNMT3A-210ENST00000474807 IGF1RP08069 1367 aa31.97■■■□□ 2.71
DNMT3A-210ENST00000474807 RUSC2Q8N2Y8 1516 aa31.88■■■□□ 2.69
DNMT3A-210ENST00000474807 CUL7Q14999 1698 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms