RNA–Protein interactions for RNA: ENST00000474760.1

POPDC3-203, Transcript of popeye domain containing 3, humanhuman

TSL 2

Gene POPDC3, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3-203ENST00000474760 NISCHQ9Y2I1 1504 aa53.21■■■■■ 6.11
POPDC3-203ENST00000474760 CCDC180Q9P1Z9 1646 aa47.42■■■■■ 5.18
POPDC3-203ENST00000474760 ABCC9O60706 1549 aa46.71■■■■■ 5.07
POPDC3-203ENST00000474760 RB1CC1Q8TDY2 1594 aa44.77■■■■■ 4.76
POPDC3-203ENST00000474760 NACADO15069 1562 aa44.65■■■■■ 4.74
POPDC3-203ENST00000474760 DCAF8L2P0C7V8 631 aa44.45■■■■■ 4.71
POPDC3-203ENST00000474760 MYO15BQ96JP2 1530 aa44.3■■■■■ 4.68
POPDC3-203ENST00000474760 ZCCHC6Q5VYS8 1495 aaKnown RBP44.28■■■■■ 4.68
POPDC3-203ENST00000474760 DCAF1Q9Y4B6 1507 aa44■■■■■ 4.63
POPDC3-203ENST00000474760 UNC13AQ9UPW8 1703 aa43.76■■■■■ 4.6
POPDC3-203ENST00000474760 PABPN1Q86U42 306 aaKnown RBP eCLIP43.58■■■■■ 4.57
POPDC3-203ENST00000474760 BICRAQ9NZM4 1560 aa43.5■■■■■ 4.55
POPDC3-203ENST00000474760 SCRIBQ14160 1630 aa43.27■■■■■ 4.52
POPDC3-203ENST00000474760 DNAJC5BQ9UF47 199 aa43.19■■■■■ 4.5
POPDC3-203ENST00000474760 SHROOM4Q9ULL8 1493 aa42.97■■■■■ 4.47
POPDC3-203ENST00000474760 EIF4G1Q04637 1599 aaKnown RBP42.35■■■■■ 4.37
POPDC3-203ENST00000474760 CC2D2AQ9P2K1 1620 aa42.24■■■■■ 4.35
POPDC3-203ENST00000474760 CECR2Q9BXF3 1484 aa42■■■■■ 4.31
POPDC3-203ENST00000474760 SMARCA4P51532 1647 aa41.36■■■■■ 4.21
POPDC3-203ENST00000474760 BAZ1AQ9NRL2 1556 aaPredicted RBP41.24■■■■■ 4.19
POPDC3-203ENST00000474760 NCAPD3P42695 1498 aa41.22■■■■■ 4.19
POPDC3-203ENST00000474760 ATAD2BQ9ULI0 1458 aa41.21■■■■■ 4.19
POPDC3-203ENST00000474760 SMARCA2P51531 1590 aa41.12■■■■■ 4.17
POPDC3-203ENST00000474760 MROH2BQ7Z745 1585 aa41.02■■■■■ 4.16
POPDC3-203ENST00000474760 HMGXB3Q12766 1538 aa41■■■■■ 4.15
POPDC3-203ENST00000474760 PEG3Q9GZU2 1588 aa40.97■■■■■ 4.15
POPDC3-203ENST00000474760 BAZ1BQ9UIG0 1483 aaKnown RBP40.83■■■■■ 4.13
POPDC3-203ENST00000474760 WIZO95785 1651 aa40.54■■■■■ 4.08
POPDC3-203ENST00000474760 RSF1Q96T23 1441 aaPredicted RBP40.42■■■■■ 4.06
POPDC3-203ENST00000474760 NESP48681 1621 aa40.36■■■■■ 4.05
POPDC3-203ENST00000474760 ERCC6Q03468 1493 aa40.25■■■■■ 4.03
POPDC3-203ENST00000474760 LAMC3Q9Y6N6 1575 aa40.16■■■■■ 4.02
POPDC3-203ENST00000474760 TOP2AP11388 1531 aaKnown RBP40.1■■■■■ 4.01
POPDC3-203ENST00000474760 CADPSQ9ULU8 1353 aa39.98■■■■□ 3.99
POPDC3-203ENST00000474760 CUX2O14529 1486 aa39.97■■■■□ 3.99
POPDC3-203ENST00000474760 PDS5BQ9NTI5 1447 aa39.88■■■■□ 3.97
POPDC3-203ENST00000474760 KIF21AQ7Z4S6 1674 aa39.84■■■■□ 3.97
POPDC3-203ENST00000474760 THOC2Q8NI27 1593 aaKnown RBP39.83■■■■□ 3.97
POPDC3-203ENST00000474760 CFTRP13569 1480 aa39.71■■■■□ 3.95
POPDC3-203ENST00000474760 CCDC88BA6NC98 1476 aa39.62■■■■□ 3.93
POPDC3-203ENST00000474760 FANCD2Q9BXW9 1451 aa39.55■■■■□ 3.92
POPDC3-203ENST00000474760 MRC2Q9UBG0 1479 aa39.54■■■■□ 3.92
POPDC3-203ENST00000474760 CEP164Q9UPV0 1460 aa39.52■■■■□ 3.92
POPDC3-203ENST00000474760 WDR62O43379 1518 aa39.45■■■■□ 3.91
POPDC3-203ENST00000474760 PRDM2Q13029 1718 aa39.33■■■■□ 3.89
POPDC3-203ENST00000474760 URB2Q14146 1524 aaKnown RBP39.2■■■■□ 3.87
POPDC3-203ENST00000474760 DNAJC5Q9H3Z4 198 aa39.09■■■■□ 3.85
POPDC3-203ENST00000474760 SUPT5HO00267 1087 aaKnown RBP39.07■■■■□ 3.85
POPDC3-203ENST00000474760 TOPBP1Q92547 1522 aa38.89■■■■□ 3.82
POPDC3-203ENST00000474760 DNMBPQ6XZF7 1577 aa38.81■■■■□ 3.8
POPDC3-203ENST00000474760 ABCC8Q09428 1581 aa38.79■■■■□ 3.8
POPDC3-203ENST00000474760 IFT140Q96RY7 1462 aa38.7■■■■□ 3.79
POPDC3-203ENST00000474760 ZNF608Q9ULD9 1512 aaPredicted RBP38.59■■■■□ 3.77
POPDC3-203ENST00000474760 POLA1P09884 1462 aaPredicted RBP38.54■■■■□ 3.76
POPDC3-203ENST00000474760 TARBP1Q13395 1621 aaKnown RBP38.5■■■■□ 3.75
POPDC3-203ENST00000474760 CUX1P39880 1505 aa38.5■■■■□ 3.75
POPDC3-203ENST00000474760 EIF4G3O43432 1585 aaKnown RBP38.42■■■■□ 3.74
POPDC3-203ENST00000474760 FGD5Q6ZNL6 1462 aa38.4■■■■□ 3.74
POPDC3-203ENST00000474760 RAD54L2Q9Y4B4 1467 aa38.38■■■■□ 3.73
POPDC3-203ENST00000474760 SOGA1O94964 1423 aa38.33■■■■□ 3.73
POPDC3-203ENST00000474760 AQRO60306 1485 aaKnown RBP eCLIP38.3■■■■□ 3.72
POPDC3-203ENST00000474760 OSCARQ8IYS5 282 aa38.19■■■■□ 3.7
POPDC3-203ENST00000474760 TDRD9Q8NDG6 1382 aaKnown RBP38.18■■■■□ 3.7
POPDC3-203ENST00000474760 WDR97A6NE52 1622 aa38.14■■■■□ 3.7
POPDC3-203ENST00000474760 WRNQ14191 1432 aaPredicted RBP eCLIP38.1■■■■□ 3.69
POPDC3-203ENST00000474760 SYNJ1O43426 1573 aa38.06■■■■□ 3.68
POPDC3-203ENST00000474760 TOP2BQ02880 1626 aa38.06■■■■□ 3.68
POPDC3-203ENST00000474760 BIVM-ERCC5R4GMW8 1640 aa38.06■■■■□ 3.68
POPDC3-203ENST00000474760 ABCA10Q8WWZ4 1543 aa38.01■■■■□ 3.67
POPDC3-203ENST00000474760 SNAPC4Q5SXM2 1469 aa37.96■■■■□ 3.67
POPDC3-203ENST00000474760 CHD1O14646 1710 aa37.96■■■■□ 3.67
POPDC3-203ENST00000474760 GRIN2BQ13224 1484 aa37.94■■■■□ 3.66
POPDC3-203ENST00000474760 ABCA5Q8WWZ7 1642 aa37.91■■■■□ 3.66
POPDC3-203ENST00000474760 GAPVD1Q14C86 1478 aa37.9■■■■□ 3.66
POPDC3-203ENST00000474760 MAGI1Q96QZ7 1491 aaPredicted RBP37.88■■■■□ 3.65
POPDC3-203ENST00000474760 PBRM1Q86U86 1689 aa37.85■■■■□ 3.65
POPDC3-203ENST00000474760 FBLN2P98095 1184 aa37.82■■■■□ 3.64
POPDC3-203ENST00000474760 SYNJ2O15056 1496 aa37.74■■■■□ 3.63
POPDC3-203ENST00000474760 RIMBP3CA6NJZ7 1639 aa37.69■■■■□ 3.62
POPDC3-203ENST00000474760 RIMBP3BA6NNM3 1639 aa37.69■■■■□ 3.62
POPDC3-203ENST00000474760 RIMBP3Q9UFD9 1639 aa37.69■■■■□ 3.62
POPDC3-203ENST00000474760 CHMP7Q8WUX9 453 aaPredicted RBP37.68■■■■□ 3.62
POPDC3-203ENST00000474760 ARHGEF11O15085 1522 aa37.66■■■■□ 3.62
POPDC3-203ENST00000474760 TRIM41Q8WV44 630 aa37.64■■■■□ 3.62
POPDC3-203ENST00000474760 CLASP1Q7Z460 1538 aa37.6■■■■□ 3.61
POPDC3-203ENST00000474760 ADAMTS12P58397 1594 aa37.57■■■■□ 3.6
POPDC3-203ENST00000474760 ERICH3Q5RHP9 1530 aa37.53■■■■□ 3.6
POPDC3-203ENST00000474760 GRIN2AQ12879 1464 aa37.47■■■■□ 3.59
POPDC3-203ENST00000474760 FHAD1B1AJZ9 1412 aa37.45■■■■□ 3.59
POPDC3-203ENST00000474760 ARAP1Q96P48 1450 aa37.36■■■■□ 3.57
POPDC3-203ENST00000474760 NUP160Q12769 1436 aa37.34■■■■□ 3.57
POPDC3-203ENST00000474760 CEP170Q5SW79 1584 aa37.33■■■■□ 3.57
POPDC3-203ENST00000474760 KIF27Q86VH2 1401 aa37.3■■■■□ 3.56
POPDC3-203ENST00000474760 CYB5RLQ6IPT4 315 aa37.25■■■■□ 3.55
POPDC3-203ENST00000474760 IGF1RP08069 1367 aa37.21■■■■□ 3.55
POPDC3-203ENST00000474760 CUL7Q14999 1698 aa37.12■■■■□ 3.53
POPDC3-203ENST00000474760 SHROOM2Q13796 1616 aa37.09■■■■□ 3.53
POPDC3-203ENST00000474760 ERCC6L2Q5T890 1561 aa37.07■■■■□ 3.52
POPDC3-203ENST00000474760 RUSC2Q8N2Y8 1516 aa37.03■■■■□ 3.52
POPDC3-203ENST00000474760 CARMIL1Q5VZK9 1371 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms