RNA–Protein interactions for RNA: ENST00000474738.1

ZDHHC4-208, Transcript of zinc finger DHHC-type containing 4, humanhuman

TSL 2

Gene ZDHHC4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC4-208ENST00000474738 NISCHQ9Y2I1 1504 aa35.32■■■■□ 3.24
ZDHHC4-208ENST00000474738 CCDC180Q9P1Z9 1646 aa31.58■■■□□ 2.65
ZDHHC4-208ENST00000474738 ABCC9O60706 1549 aa31.51■■■□□ 2.63
ZDHHC4-208ENST00000474738 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
ZDHHC4-208ENST00000474738 NACADO15069 1562 aa29.76■■■□□ 2.35
ZDHHC4-208ENST00000474738 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
ZDHHC4-208ENST00000474738 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
ZDHHC4-208ENST00000474738 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
ZDHHC4-208ENST00000474738 PABPN1Q86U42 306 aaKnown RBP eCLIP29.39■■■□□ 2.3
ZDHHC4-208ENST00000474738 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
ZDHHC4-208ENST00000474738 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
ZDHHC4-208ENST00000474738 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
ZDHHC4-208ENST00000474738 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
ZDHHC4-208ENST00000474738 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
ZDHHC4-208ENST00000474738 SHROOM4Q9ULL8 1493 aa28.55■■■□□ 2.16
ZDHHC4-208ENST00000474738 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
ZDHHC4-208ENST00000474738 EIF4G1Q04637 1599 aaKnown RBP28.42■■■□□ 2.14
ZDHHC4-208ENST00000474738 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
ZDHHC4-208ENST00000474738 SMARCA4P51532 1647 aa27.55■■■□□ 2
ZDHHC4-208ENST00000474738 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
ZDHHC4-208ENST00000474738 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
ZDHHC4-208ENST00000474738 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
ZDHHC4-208ENST00000474738 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
ZDHHC4-208ENST00000474738 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
ZDHHC4-208ENST00000474738 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
ZDHHC4-208ENST00000474738 PEG3Q9GZU2 1588 aa27.21■■□□□ 1.95
ZDHHC4-208ENST00000474738 NESP48681 1621 aa27.19■■□□□ 1.94
ZDHHC4-208ENST00000474738 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
ZDHHC4-208ENST00000474738 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
ZDHHC4-208ENST00000474738 WIZO95785 1651 aa27.03■■□□□ 1.92
ZDHHC4-208ENST00000474738 CUX2O14529 1486 aa26.93■■□□□ 1.9
ZDHHC4-208ENST00000474738 KIF21AQ7Z4S6 1674 aa26.86■■□□□ 1.89
ZDHHC4-208ENST00000474738 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
ZDHHC4-208ENST00000474738 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
ZDHHC4-208ENST00000474738 DNAJC5Q9H3Z4 198 aa26.78■■□□□ 1.88
ZDHHC4-208ENST00000474738 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
ZDHHC4-208ENST00000474738 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
ZDHHC4-208ENST00000474738 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
ZDHHC4-208ENST00000474738 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
ZDHHC4-208ENST00000474738 MRC2Q9UBG0 1479 aa26.46■■□□□ 1.83
ZDHHC4-208ENST00000474738 WDR62O43379 1518 aa26.43■■□□□ 1.82
ZDHHC4-208ENST00000474738 CFTRP13569 1480 aa26.42■■□□□ 1.82
ZDHHC4-208ENST00000474738 FANCD2Q9BXW9 1451 aa26.4■■□□□ 1.82
ZDHHC4-208ENST00000474738 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
ZDHHC4-208ENST00000474738 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
ZDHHC4-208ENST00000474738 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
ZDHHC4-208ENST00000474738 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
ZDHHC4-208ENST00000474738 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
ZDHHC4-208ENST00000474738 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
ZDHHC4-208ENST00000474738 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
ZDHHC4-208ENST00000474738 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
ZDHHC4-208ENST00000474738 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
ZDHHC4-208ENST00000474738 TARBP1Q13395 1621 aaKnown RBP25.76■■□□□ 1.71
ZDHHC4-208ENST00000474738 TRIM41Q8WV44 630 aa25.74■■□□□ 1.71
ZDHHC4-208ENST00000474738 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
ZDHHC4-208ENST00000474738 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
ZDHHC4-208ENST00000474738 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
ZDHHC4-208ENST00000474738 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
ZDHHC4-208ENST00000474738 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.75e-7■■■■■ 27.6
ZDHHC4-208ENST00000474738 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
ZDHHC4-208ENST00000474738 CUX1P39880 1505 aa25.63■■□□□ 1.69
ZDHHC4-208ENST00000474738 CHD1O14646 1710 aa25.61■■□□□ 1.69
ZDHHC4-208ENST00000474738 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
ZDHHC4-208ENST00000474738 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
ZDHHC4-208ENST00000474738 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
ZDHHC4-208ENST00000474738 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
ZDHHC4-208ENST00000474738 SOGA1O94964 1423 aa25.53■■□□□ 1.68
ZDHHC4-208ENST00000474738 TDRD9Q8NDG6 1382 aaKnown RBP25.52■■□□□ 1.68
ZDHHC4-208ENST00000474738 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
ZDHHC4-208ENST00000474738 ARHGEF11O15085 1522 aa25.43■■□□□ 1.66
ZDHHC4-208ENST00000474738 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
ZDHHC4-208ENST00000474738 FBLN2P98095 1184 aa25.39■■□□□ 1.66
ZDHHC4-208ENST00000474738 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
ZDHHC4-208ENST00000474738 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
ZDHHC4-208ENST00000474738 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
ZDHHC4-208ENST00000474738 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
ZDHHC4-208ENST00000474738 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
ZDHHC4-208ENST00000474738 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
ZDHHC4-208ENST00000474738 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
ZDHHC4-208ENST00000474738 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
ZDHHC4-208ENST00000474738 ARAP1Q96P48 1450 aa25.22■■□□□ 1.63
ZDHHC4-208ENST00000474738 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
ZDHHC4-208ENST00000474738 TOP2BQ02880 1626 aa25.2■■□□□ 1.62
ZDHHC4-208ENST00000474738 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
ZDHHC4-208ENST00000474738 SYNJ2O15056 1496 aa25.17■■□□□ 1.62
ZDHHC4-208ENST00000474738 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
ZDHHC4-208ENST00000474738 WRNQ14191 1432 aaPredicted RBP eCLIP25.15■■□□□ 1.62
ZDHHC4-208ENST00000474738 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
ZDHHC4-208ENST00000474738 GRIN2AQ12879 1464 aa24.99■■□□□ 1.59
ZDHHC4-208ENST00000474738 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
ZDHHC4-208ENST00000474738 ERCC6L2Q5T890 1561 aa24.99■■□□□ 1.59
ZDHHC4-208ENST00000474738 NUP160Q12769 1436 aa24.89■■□□□ 1.58
ZDHHC4-208ENST00000474738 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.57
ZDHHC4-208ENST00000474738 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
ZDHHC4-208ENST00000474738 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
ZDHHC4-208ENST00000474738 TRHP20396 242 aaPredicted RBP24.81■■□□□ 1.56
ZDHHC4-208ENST00000474738 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
ZDHHC4-208ENST00000474738 IGF1RP08069 1367 aa24.67■■□□□ 1.54
ZDHHC4-208ENST00000474738 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
ZDHHC4-208ENST00000474738 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms