RNA–Protein interactions for RNA: ENST00000474689.3

RN7SL40P-201, Transcript of RNA, 7SL, cytoplasmic 40, pseudogene, humanhuman

BASIC

Gene RN7SL40P, Length 342 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL40P-201ENST00000474689 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
RN7SL40P-201ENST00000474689 ABCC9O60706 1549 aa25.17■■□□□ 1.62
RN7SL40P-201ENST00000474689 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
RN7SL40P-201ENST00000474689 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
RN7SL40P-201ENST00000474689 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
RN7SL40P-201ENST00000474689 NACADO15069 1562 aa23.5■■□□□ 1.35
RN7SL40P-201ENST00000474689 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
RN7SL40P-201ENST00000474689 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
RN7SL40P-201ENST00000474689 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
RN7SL40P-201ENST00000474689 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
RN7SL40P-201ENST00000474689 MYO15BQ96JP2 1530 aa23.05■■□□□ 1.28
RN7SL40P-201ENST00000474689 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
RN7SL40P-201ENST00000474689 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
RN7SL40P-201ENST00000474689 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
RN7SL40P-201ENST00000474689 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
RN7SL40P-201ENST00000474689 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
RN7SL40P-201ENST00000474689 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
RN7SL40P-201ENST00000474689 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
RN7SL40P-201ENST00000474689 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
RN7SL40P-201ENST00000474689 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
RN7SL40P-201ENST00000474689 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
RN7SL40P-201ENST00000474689 CUX2O14529 1486 aa21.67■■□□□ 1.06
RN7SL40P-201ENST00000474689 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
RN7SL40P-201ENST00000474689 NESP48681 1621 aa21.58■■□□□ 1.04
RN7SL40P-201ENST00000474689 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
RN7SL40P-201ENST00000474689 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
RN7SL40P-201ENST00000474689 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
RN7SL40P-201ENST00000474689 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
RN7SL40P-201ENST00000474689 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
RN7SL40P-201ENST00000474689 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
RN7SL40P-201ENST00000474689 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
RN7SL40P-201ENST00000474689 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
RN7SL40P-201ENST00000474689 LAMC3Q9Y6N6 1575 aa21.25■□□□□ 0.99
RN7SL40P-201ENST00000474689 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
RN7SL40P-201ENST00000474689 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
RN7SL40P-201ENST00000474689 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.96
RN7SL40P-201ENST00000474689 WIZO95785 1651 aa21.04■□□□□ 0.96
RN7SL40P-201ENST00000474689 TRIM41Q8WV44 630 aa21.01■□□□□ 0.95
RN7SL40P-201ENST00000474689 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
RN7SL40P-201ENST00000474689 WDR62O43379 1518 aa20.95■□□□□ 0.94
RN7SL40P-201ENST00000474689 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
RN7SL40P-201ENST00000474689 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
RN7SL40P-201ENST00000474689 CFTRP13569 1480 aa20.78■□□□□ 0.92
RN7SL40P-201ENST00000474689 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
RN7SL40P-201ENST00000474689 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
RN7SL40P-201ENST00000474689 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
RN7SL40P-201ENST00000474689 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
RN7SL40P-201ENST00000474689 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
RN7SL40P-201ENST00000474689 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
RN7SL40P-201ENST00000474689 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
RN7SL40P-201ENST00000474689 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
RN7SL40P-201ENST00000474689 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
RN7SL40P-201ENST00000474689 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
RN7SL40P-201ENST00000474689 IFT140Q96RY7 1462 aa20.45■□□□□ 0.86
RN7SL40P-201ENST00000474689 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
RN7SL40P-201ENST00000474689 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
RN7SL40P-201ENST00000474689 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
RN7SL40P-201ENST00000474689 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
RN7SL40P-201ENST00000474689 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
RN7SL40P-201ENST00000474689 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
RN7SL40P-201ENST00000474689 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
RN7SL40P-201ENST00000474689 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.83
RN7SL40P-201ENST00000474689 CHD1O14646 1710 aa20.26■□□□□ 0.83
RN7SL40P-201ENST00000474689 FBLN2P98095 1184 aa20.23■□□□□ 0.83
RN7SL40P-201ENST00000474689 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
RN7SL40P-201ENST00000474689 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
RN7SL40P-201ENST00000474689 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
RN7SL40P-201ENST00000474689 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
RN7SL40P-201ENST00000474689 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
RN7SL40P-201ENST00000474689 SOGA1O94964 1423 aa20.11■□□□□ 0.81
RN7SL40P-201ENST00000474689 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
RN7SL40P-201ENST00000474689 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
RN7SL40P-201ENST00000474689 CUX1P39880 1505 aa20.02■□□□□ 0.79
RN7SL40P-201ENST00000474689 CLASP1Q7Z460 1538 aa20.01■□□□□ 0.79
RN7SL40P-201ENST00000474689 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
RN7SL40P-201ENST00000474689 GRIN2BQ13224 1484 aa19.93■□□□□ 0.78
RN7SL40P-201ENST00000474689 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
RN7SL40P-201ENST00000474689 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
RN7SL40P-201ENST00000474689 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
RN7SL40P-201ENST00000474689 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
RN7SL40P-201ENST00000474689 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
RN7SL40P-201ENST00000474689 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
RN7SL40P-201ENST00000474689 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
RN7SL40P-201ENST00000474689 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
RN7SL40P-201ENST00000474689 ERCC6L2Q5T890 1561 aa19.77■□□□□ 0.76
RN7SL40P-201ENST00000474689 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
RN7SL40P-201ENST00000474689 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
RN7SL40P-201ENST00000474689 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
RN7SL40P-201ENST00000474689 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
RN7SL40P-201ENST00000474689 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
RN7SL40P-201ENST00000474689 ADAMTS12P58397 1594 aa19.65■□□□□ 0.74
RN7SL40P-201ENST00000474689 NUP160Q12769 1436 aa19.63■□□□□ 0.73
RN7SL40P-201ENST00000474689 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
RN7SL40P-201ENST00000474689 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.72
RN7SL40P-201ENST00000474689 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
RN7SL40P-201ENST00000474689 SHROOM2Q13796 1616 aa19.56■□□□□ 0.72
RN7SL40P-201ENST00000474689 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
RN7SL40P-201ENST00000474689 PRG4Q92954 1404 aaPredicted RBP19.5■□□□□ 0.71
RN7SL40P-201ENST00000474689 KIF13AQ9H1H9 1805 aa19.47■□□□□ 0.71
RN7SL40P-201ENST00000474689 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms