RNA–Protein interactions for RNA: ENST00000474668.1

PTRHD1-203, Transcript of peptidyl-tRNA hydrolase domain containing 1, humanhuman

TSL 2

Gene PTRHD1, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRHD1-203ENST00000474668 NISCHQ9Y2I1 1504 aa30.87■■■□□ 2.53
PTRHD1-203ENST00000474668 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
PTRHD1-203ENST00000474668 ABCC9O60706 1549 aa27.23■■□□□ 1.95
PTRHD1-203ENST00000474668 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
PTRHD1-203ENST00000474668 NACADO15069 1562 aa26.03■■□□□ 1.76
PTRHD1-203ENST00000474668 DCAF8L2P0C7V8 631 aa25.88■■□□□ 1.73
PTRHD1-203ENST00000474668 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
PTRHD1-203ENST00000474668 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
PTRHD1-203ENST00000474668 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
PTRHD1-203ENST00000474668 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
PTRHD1-203ENST00000474668 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
PTRHD1-203ENST00000474668 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
PTRHD1-203ENST00000474668 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
PTRHD1-203ENST00000474668 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
PTRHD1-203ENST00000474668 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.6
PTRHD1-203ENST00000474668 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
PTRHD1-203ENST00000474668 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
PTRHD1-203ENST00000474668 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
PTRHD1-203ENST00000474668 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
PTRHD1-203ENST00000474668 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
PTRHD1-203ENST00000474668 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
PTRHD1-203ENST00000474668 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
PTRHD1-203ENST00000474668 ATAD2BQ9ULI0 1458 aa23.93■■□□□ 1.42
PTRHD1-203ENST00000474668 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
PTRHD1-203ENST00000474668 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
PTRHD1-203ENST00000474668 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
PTRHD1-203ENST00000474668 MROH2BQ7Z745 1585 aa23.76■■□□□ 1.39
PTRHD1-203ENST00000474668 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
PTRHD1-203ENST00000474668 WIZO95785 1651 aa23.54■■□□□ 1.36
PTRHD1-203ENST00000474668 NESP48681 1621 aa23.45■■□□□ 1.34
PTRHD1-203ENST00000474668 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
PTRHD1-203ENST00000474668 CUX2O14529 1486 aa23.39■■□□□ 1.34
PTRHD1-203ENST00000474668 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
PTRHD1-203ENST00000474668 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
PTRHD1-203ENST00000474668 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
PTRHD1-203ENST00000474668 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
PTRHD1-203ENST00000474668 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
PTRHD1-203ENST00000474668 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
PTRHD1-203ENST00000474668 CFTRP13569 1480 aa23.05■■□□□ 1.28
PTRHD1-203ENST00000474668 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
PTRHD1-203ENST00000474668 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
PTRHD1-203ENST00000474668 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
PTRHD1-203ENST00000474668 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
PTRHD1-203ENST00000474668 WDR62O43379 1518 aa22.98■■□□□ 1.27
PTRHD1-203ENST00000474668 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
PTRHD1-203ENST00000474668 DNAJC5Q9H3Z4 198 aa22.88■■□□□ 1.25
PTRHD1-203ENST00000474668 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
PTRHD1-203ENST00000474668 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
PTRHD1-203ENST00000474668 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
PTRHD1-203ENST00000474668 DNMBPQ6XZF7 1577 aa22.6■■□□□ 1.21
PTRHD1-203ENST00000474668 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
PTRHD1-203ENST00000474668 IFT140Q96RY7 1462 aa22.55■■□□□ 1.2
PTRHD1-203ENST00000474668 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
PTRHD1-203ENST00000474668 EIF4G3O43432 1585 aaKnown RBP22.41■■□□□ 1.18
PTRHD1-203ENST00000474668 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.18
PTRHD1-203ENST00000474668 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.17
PTRHD1-203ENST00000474668 CUX1P39880 1505 aa22.32■■□□□ 1.16
PTRHD1-203ENST00000474668 FGD5Q6ZNL6 1462 aa22.31■■□□□ 1.16
PTRHD1-203ENST00000474668 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
PTRHD1-203ENST00000474668 SOGA1O94964 1423 aa22.29■■□□□ 1.16
PTRHD1-203ENST00000474668 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
PTRHD1-203ENST00000474668 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
PTRHD1-203ENST00000474668 AQRO60306 1485 aaKnown RBP eCLIP22.25■■□□□ 1.15
PTRHD1-203ENST00000474668 CHD1O14646 1710 aa22.21■■□□□ 1.15
PTRHD1-203ENST00000474668 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
PTRHD1-203ENST00000474668 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
PTRHD1-203ENST00000474668 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
PTRHD1-203ENST00000474668 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
PTRHD1-203ENST00000474668 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
PTRHD1-203ENST00000474668 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
PTRHD1-203ENST00000474668 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
PTRHD1-203ENST00000474668 FBLN2P98095 1184 aa22.09■■□□□ 1.13
PTRHD1-203ENST00000474668 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
PTRHD1-203ENST00000474668 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
PTRHD1-203ENST00000474668 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
PTRHD1-203ENST00000474668 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
PTRHD1-203ENST00000474668 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
PTRHD1-203ENST00000474668 RIMBP3CA6NJZ7 1639 aa22.05■■□□□ 1.12
PTRHD1-203ENST00000474668 RIMBP3BA6NNM3 1639 aa22.05■■□□□ 1.12
PTRHD1-203ENST00000474668 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
PTRHD1-203ENST00000474668 RIMBP3Q9UFD9 1639 aa22.05■■□□□ 1.12
PTRHD1-203ENST00000474668 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
PTRHD1-203ENST00000474668 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
PTRHD1-203ENST00000474668 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
PTRHD1-203ENST00000474668 CLASP1Q7Z460 1538 aa21.89■■□□□ 1.09
PTRHD1-203ENST00000474668 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
PTRHD1-203ENST00000474668 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
PTRHD1-203ENST00000474668 GRIN2AQ12879 1464 aa21.8■■□□□ 1.08
PTRHD1-203ENST00000474668 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
PTRHD1-203ENST00000474668 ARAP1Q96P48 1450 aa21.77■■□□□ 1.07
PTRHD1-203ENST00000474668 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
PTRHD1-203ENST00000474668 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
PTRHD1-203ENST00000474668 NUP160Q12769 1436 aa21.69■■□□□ 1.06
PTRHD1-203ENST00000474668 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
PTRHD1-203ENST00000474668 CUL7Q14999 1698 aa21.66■■□□□ 1.06
PTRHD1-203ENST00000474668 SHROOM2Q13796 1616 aa21.6■■□□□ 1.05
PTRHD1-203ENST00000474668 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
PTRHD1-203ENST00000474668 IGF1RP08069 1367 aa21.53■■□□□ 1.04
PTRHD1-203ENST00000474668 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
PTRHD1-203ENST00000474668 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms