RNA–Protein interactions for RNA: ENST00000474635.1

SNRPC-204, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

TSL 5

Gene SNRPC, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-204ENST00000474635 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
SNRPC-204ENST00000474635 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
SNRPC-204ENST00000474635 ABCC9O60706 1549 aa18.43■□□□□ 0.54
SNRPC-204ENST00000474635 RB1CC1Q8TDY2 1594 aa17.67■□□□□ 0.42
SNRPC-204ENST00000474635 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
SNRPC-204ENST00000474635 NACADO15069 1562 aa17.61■□□□□ 0.41
SNRPC-204ENST00000474635 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
SNRPC-204ENST00000474635 ZCCHC6Q5VYS8 1495 aaKnown RBP17.4■□□□□ 0.38
SNRPC-204ENST00000474635 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
SNRPC-204ENST00000474635 UNC13AQ9UPW8 1703 aa17.19■□□□□ 0.34
SNRPC-204ENST00000474635 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRPC-204ENST00000474635 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
SNRPC-204ENST00000474635 SCRIBQ14160 1630 aa17.05■□□□□ 0.32
SNRPC-204ENST00000474635 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
SNRPC-204ENST00000474635 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
SNRPC-204ENST00000474635 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
SNRPC-204ENST00000474635 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
SNRPC-204ENST00000474635 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
SNRPC-204ENST00000474635 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
SNRPC-204ENST00000474635 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
SNRPC-204ENST00000474635 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
SNRPC-204ENST00000474635 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
SNRPC-204ENST00000474635 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
SNRPC-204ENST00000474635 HMGXB3Q12766 1538 aa16.14■□□□□ 0.18
SNRPC-204ENST00000474635 BAZ1BQ9UIG0 1483 aaKnown RBP16.12■□□□□ 0.17
SNRPC-204ENST00000474635 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
SNRPC-204ENST00000474635 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
SNRPC-204ENST00000474635 ERCC6Q03468 1493 aa15.95■□□□□ 0.14
SNRPC-204ENST00000474635 WIZO95785 1651 aa15.94■□□□□ 0.14
SNRPC-204ENST00000474635 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
SNRPC-204ENST00000474635 NESP48681 1621 aa15.86■□□□□ 0.13
SNRPC-204ENST00000474635 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
SNRPC-204ENST00000474635 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
SNRPC-204ENST00000474635 CUX2O14529 1486 aa15.78■□□□□ 0.12
SNRPC-204ENST00000474635 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.12
SNRPC-204ENST00000474635 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
SNRPC-204ENST00000474635 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
SNRPC-204ENST00000474635 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
SNRPC-204ENST00000474635 CFTRP13569 1480 aa15.62■□□□□ 0.09
SNRPC-204ENST00000474635 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
SNRPC-204ENST00000474635 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
SNRPC-204ENST00000474635 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
SNRPC-204ENST00000474635 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
SNRPC-204ENST00000474635 WDR62O43379 1518 aa15.53■□□□□ 0.08
SNRPC-204ENST00000474635 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
SNRPC-204ENST00000474635 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
SNRPC-204ENST00000474635 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
SNRPC-204ENST00000474635 URB2Q14146 1524 aaKnown RBP15.41■□□□□ 0.06
SNRPC-204ENST00000474635 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
SNRPC-204ENST00000474635 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
SNRPC-204ENST00000474635 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
SNRPC-204ENST00000474635 IFT140Q96RY7 1462 aa15.27■□□□□ 0.04
SNRPC-204ENST00000474635 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
SNRPC-204ENST00000474635 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
SNRPC-204ENST00000474635 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
SNRPC-204ENST00000474635 SOGA1O94964 1423 aa15.13■□□□□ 0.01
SNRPC-204ENST00000474635 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
SNRPC-204ENST00000474635 CUX1P39880 1505 aa15.12■□□□□ 0.01
SNRPC-204ENST00000474635 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
SNRPC-204ENST00000474635 TARBP1Q13395 1621 aaKnown RBP15.12■□□□□ 0.01
SNRPC-204ENST00000474635 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
SNRPC-204ENST00000474635 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.011e-7■■■■□ 23.2
SNRPC-204ENST00000474635 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
SNRPC-204ENST00000474635 WDR97A6NE52 1622 aa15.04■□□□□ -0
SNRPC-204ENST00000474635 WRNQ14191 1432 aaPredicted RBP eCLIP15.02■□□□□ -0
SNRPC-204ENST00000474635 FBLN2P98095 1184 aa15.01□□□□□ -0.01
SNRPC-204ENST00000474635 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
SNRPC-204ENST00000474635 SNAPC4Q5SXM2 1469 aa14.97□□□□□ -0.01
SNRPC-204ENST00000474635 TOP2BQ02880 1626 aa14.97□□□□□ -0.01
SNRPC-204ENST00000474635 BIVM-ERCC5R4GMW8 1640 aa14.97□□□□□ -0.01
SNRPC-204ENST00000474635 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
SNRPC-204ENST00000474635 CHD1O14646 1710 aa14.96□□□□□ -0.01
SNRPC-204ENST00000474635 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
SNRPC-204ENST00000474635 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
SNRPC-204ENST00000474635 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
SNRPC-204ENST00000474635 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
SNRPC-204ENST00000474635 CHMP7Q8WUX9 453 aaPredicted RBP14.93□□□□□ -0.02
SNRPC-204ENST00000474635 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
SNRPC-204ENST00000474635 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
SNRPC-204ENST00000474635 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
SNRPC-204ENST00000474635 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
SNRPC-204ENST00000474635 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
SNRPC-204ENST00000474635 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
SNRPC-204ENST00000474635 ARHGEF11O15085 1522 aa14.85□□□□□ -0.03
SNRPC-204ENST00000474635 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
SNRPC-204ENST00000474635 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
SNRPC-204ENST00000474635 CLASP1Q7Z460 1538 aa14.78□□□□□ -0.04
SNRPC-204ENST00000474635 FHAD1B1AJZ9 1412 aa14.78□□□□□ -0.04
SNRPC-204ENST00000474635 GRIN2AQ12879 1464 aa14.77□□□□□ -0.04
SNRPC-204ENST00000474635 CYB5RLQ6IPT4 315 aa14.75□□□□□ -0.05
SNRPC-204ENST00000474635 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
SNRPC-204ENST00000474635 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
SNRPC-204ENST00000474635 NUP160Q12769 1436 aa14.69□□□□□ -0.06
SNRPC-204ENST00000474635 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
SNRPC-204ENST00000474635 CUL7Q14999 1698 aa14.65□□□□□ -0.06
SNRPC-204ENST00000474635 IGF1RP08069 1367 aa14.63□□□□□ -0.07
SNRPC-204ENST00000474635 CARMIL1Q5VZK9 1371 aa14.59□□□□□ -0.07
SNRPC-204ENST00000474635 SHROOM2Q13796 1616 aa14.58□□□□□ -0.08
SNRPC-204ENST00000474635 RUSC2Q8N2Y8 1516 aa14.57□□□□□ -0.08
SNRPC-204ENST00000474635 JPH4Q96JJ6 628 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms