RNA–Protein interactions for RNA: ENST00000474562.1

SIKE1-207, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-207ENST00000474562 NISCHQ9Y2I1 1504 aa46.15■■■■■ 4.98
SIKE1-207ENST00000474562 CCDC180Q9P1Z9 1646 aa41.24■■■■■ 4.19
SIKE1-207ENST00000474562 ABCC9O60706 1549 aa40.77■■■■■ 4.12
SIKE1-207ENST00000474562 RB1CC1Q8TDY2 1594 aa39.04■■■■□ 3.84
SIKE1-207ENST00000474562 DCAF8L2P0C7V8 631 aa38.87■■■■□ 3.81
SIKE1-207ENST00000474562 NACADO15069 1562 aa38.87■■■■□ 3.81
SIKE1-207ENST00000474562 MYO15BQ96JP2 1530 aa38.44■■■■□ 3.74
SIKE1-207ENST00000474562 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
SIKE1-207ENST00000474562 DCAF1Q9Y4B6 1507 aa38.14■■■■□ 3.7
SIKE1-207ENST00000474562 UNC13AQ9UPW8 1703 aa38.14■■■■□ 3.7
SIKE1-207ENST00000474562 PABPN1Q86U42 306 aaKnown RBP eCLIP38.03■■■■□ 3.68
SIKE1-207ENST00000474562 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
SIKE1-207ENST00000474562 DNAJC5BQ9UF47 199 aa37.72■■■■□ 3.63
SIKE1-207ENST00000474562 SCRIBQ14160 1630 aa37.62■■■■□ 3.61
SIKE1-207ENST00000474562 SHROOM4Q9ULL8 1493 aa37.38■■■■□ 3.57
SIKE1-207ENST00000474562 EIF4G1Q04637 1599 aaKnown RBP36.87■■■■□ 3.49
SIKE1-207ENST00000474562 CC2D2AQ9P2K1 1620 aa36.84■■■■□ 3.49
SIKE1-207ENST00000474562 CECR2Q9BXF3 1484 aa36.67■■■■□ 3.46
SIKE1-207ENST00000474562 SMARCA4P51532 1647 aa35.92■■■■□ 3.34
SIKE1-207ENST00000474562 NCAPD3P42695 1498 aa35.84■■■■□ 3.33
SIKE1-207ENST00000474562 BAZ1AQ9NRL2 1556 aaPredicted RBP35.83■■■■□ 3.33
SIKE1-207ENST00000474562 ATAD2BQ9ULI0 1458 aa35.8■■■■□ 3.32
SIKE1-207ENST00000474562 SMARCA2P51531 1590 aa35.78■■■■□ 3.32
SIKE1-207ENST00000474562 HMGXB3Q12766 1538 aa35.63■■■■□ 3.29
SIKE1-207ENST00000474562 MROH2BQ7Z745 1585 aa35.56■■■■□ 3.28
SIKE1-207ENST00000474562 BAZ1BQ9UIG0 1483 aaKnown RBP35.54■■■■□ 3.28
SIKE1-207ENST00000474562 PEG3Q9GZU2 1588 aa35.53■■■■□ 3.28
SIKE1-207ENST00000474562 ERCC6Q03468 1493 aa35.22■■■■□ 3.23
SIKE1-207ENST00000474562 WIZO95785 1651 aa35.19■■■■□ 3.22
SIKE1-207ENST00000474562 NESP48681 1621 aa35.13■■■■□ 3.21
SIKE1-207ENST00000474562 RSF1Q96T23 1441 aaPredicted RBP35■■■■□ 3.19
SIKE1-207ENST00000474562 LAMC3Q9Y6N6 1575 aa35■■■■□ 3.19
SIKE1-207ENST00000474562 CUX2O14529 1486 aa34.92■■■■□ 3.18
SIKE1-207ENST00000474562 PDS5BQ9NTI5 1447 aa34.8■■■■□ 3.16
SIKE1-207ENST00000474562 CADPSQ9ULU8 1353 aa34.79■■■■□ 3.16
SIKE1-207ENST00000474562 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
SIKE1-207ENST00000474562 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
SIKE1-207ENST00000474562 THOC2Q8NI27 1593 aaKnown RBP34.67■■■■□ 3.14
SIKE1-207ENST00000474562 CFTRP13569 1480 aa34.48■■■■□ 3.11
SIKE1-207ENST00000474562 MRC2Q9UBG0 1479 aa34.45■■■■□ 3.1
SIKE1-207ENST00000474562 CEP164Q9UPV0 1460 aa34.43■■■■□ 3.1
SIKE1-207ENST00000474562 FANCD2Q9BXW9 1451 aa34.42■■■■□ 3.1
SIKE1-207ENST00000474562 CCDC88BA6NC98 1476 aa34.37■■■■□ 3.09
SIKE1-207ENST00000474562 DNAJC5Q9H3Z4 198 aa34.32■■■■□ 3.08
SIKE1-207ENST00000474562 WDR62O43379 1518 aa34.31■■■■□ 3.08
SIKE1-207ENST00000474562 PRDM2Q13029 1718 aa34.26■■■■□ 3.07
SIKE1-207ENST00000474562 URB2Q14146 1524 aaKnown RBP34.07■■■■□ 3.04
SIKE1-207ENST00000474562 SUPT5HO00267 1087 aaKnown RBP33.93■■■■□ 3.02
SIKE1-207ENST00000474562 TOPBP1Q92547 1522 aa33.81■■■■□ 3
SIKE1-207ENST00000474562 ABCC8Q09428 1581 aa33.81■■■■□ 3
SIKE1-207ENST00000474562 DNMBPQ6XZF7 1577 aa33.74■■■□□ 2.99
SIKE1-207ENST00000474562 IFT140Q96RY7 1462 aa33.71■■■□□ 2.99
SIKE1-207ENST00000474562 ZNF608Q9ULD9 1512 aaPredicted RBP33.57■■■□□ 2.96
SIKE1-207ENST00000474562 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
SIKE1-207ENST00000474562 EIF4G3O43432 1585 aaKnown RBP33.45■■■□□ 2.95
SIKE1-207ENST00000474562 TARBP1Q13395 1621 aaKnown RBP33.45■■■□□ 2.95
SIKE1-207ENST00000474562 OSCARQ8IYS5 282 aa33.44■■■□□ 2.94
SIKE1-207ENST00000474562 CUX1P39880 1505 aa33.38■■■□□ 2.93
SIKE1-207ENST00000474562 SOGA1O94964 1423 aa33.37■■■□□ 2.93
SIKE1-207ENST00000474562 FGD5Q6ZNL6 1462 aa33.37■■■□□ 2.93
SIKE1-207ENST00000474562 RAD54L2Q9Y4B4 1467 aa33.36■■■□□ 2.93
SIKE1-207ENST00000474562 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.938e-7■■■□□ 16
SIKE1-207ENST00000474562 TDRD9Q8NDG6 1382 aaKnown RBP33.23■■■□□ 2.91
SIKE1-207ENST00000474562 WDR97A6NE52 1622 aa33.18■■■□□ 2.9
SIKE1-207ENST00000474562 CHD1O14646 1710 aa33.13■■■□□ 2.89
SIKE1-207ENST00000474562 FBLN2P98095 1184 aa33.12■■■□□ 2.89
SIKE1-207ENST00000474562 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
SIKE1-207ENST00000474562 WRNQ14191 1432 aaPredicted RBP eCLIP33.06■■■□□ 2.88
SIKE1-207ENST00000474562 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
SIKE1-207ENST00000474562 GRIN2BQ13224 1484 aa33.03■■■□□ 2.88
SIKE1-207ENST00000474562 TOP2BQ02880 1626 aa33.01■■■□□ 2.87
SIKE1-207ENST00000474562 BIVM-ERCC5R4GMW8 1640 aa33.01■■■□□ 2.87
SIKE1-207ENST00000474562 ABCA10Q8WWZ4 1543 aa33■■■□□ 2.87
SIKE1-207ENST00000474562 GAPVD1Q14C86 1478 aa32.98■■■□□ 2.87
SIKE1-207ENST00000474562 MAGI1Q96QZ7 1491 aaPredicted RBP32.98■■■□□ 2.87
SIKE1-207ENST00000474562 SYNJ1O43426 1573 aa32.97■■■□□ 2.87
SIKE1-207ENST00000474562 PBRM1Q86U86 1689 aa32.95■■■□□ 2.87
SIKE1-207ENST00000474562 CHMP7Q8WUX9 453 aaPredicted RBP32.94■■■□□ 2.86
SIKE1-207ENST00000474562 RIMBP3CA6NJZ7 1639 aa32.93■■■□□ 2.86
SIKE1-207ENST00000474562 RIMBP3BA6NNM3 1639 aa32.93■■■□□ 2.86
SIKE1-207ENST00000474562 RIMBP3Q9UFD9 1639 aa32.93■■■□□ 2.86
SIKE1-207ENST00000474562 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
SIKE1-207ENST00000474562 ARHGEF11O15085 1522 aa32.87■■■□□ 2.85
SIKE1-207ENST00000474562 SYNJ2O15056 1496 aa32.86■■■□□ 2.85
SIKE1-207ENST00000474562 CLASP1Q7Z460 1538 aa32.7■■■□□ 2.83
SIKE1-207ENST00000474562 ADAMTS12P58397 1594 aa32.64■■■□□ 2.82
SIKE1-207ENST00000474562 CYB5RLQ6IPT4 315 aa32.64■■■□□ 2.82
SIKE1-207ENST00000474562 ERICH3Q5RHP9 1530 aa32.61■■■□□ 2.81
SIKE1-207ENST00000474562 GRIN2AQ12879 1464 aa32.59■■■□□ 2.81
SIKE1-207ENST00000474562 FHAD1B1AJZ9 1412 aa32.58■■■□□ 2.81
SIKE1-207ENST00000474562 ARAP1Q96P48 1450 aa32.57■■■□□ 2.8
SIKE1-207ENST00000474562 CEP170Q5SW79 1584 aa32.45■■■□□ 2.78
SIKE1-207ENST00000474562 NUP160Q12769 1436 aa32.43■■■□□ 2.78
SIKE1-207ENST00000474562 KIF27Q86VH2 1401 aa32.42■■■□□ 2.78
SIKE1-207ENST00000474562 IGF1RP08069 1367 aa32.28■■■□□ 2.76
SIKE1-207ENST00000474562 CUL7Q14999 1698 aa32.27■■■□□ 2.76
SIKE1-207ENST00000474562 SHROOM2Q13796 1616 aa32.24■■■□□ 2.75
SIKE1-207ENST00000474562 ERCC6L2Q5T890 1561 aa32.23■■■□□ 2.75
SIKE1-207ENST00000474562 TRHP20396 242 aaPredicted RBP32.17■■■□□ 2.74
SIKE1-207ENST00000474562 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms