RNA–Protein interactions for RNA: ENST00000474540.1

AP001024.1-201, humanhuman

BASIC

Gene AP001024.1, Length 345 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001024.1-201ENST00000474540 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
AP001024.1-201ENST00000474540 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
AP001024.1-201ENST00000474540 ABCC9O60706 1549 aa22.35■■□□□ 1.17
AP001024.1-201ENST00000474540 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
AP001024.1-201ENST00000474540 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
AP001024.1-201ENST00000474540 NACADO15069 1562 aa21.36■■□□□ 1.01
AP001024.1-201ENST00000474540 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
AP001024.1-201ENST00000474540 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
AP001024.1-201ENST00000474540 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
AP001024.1-201ENST00000474540 UNC13AQ9UPW8 1703 aa20.86■□□□□ 0.93
AP001024.1-201ENST00000474540 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
AP001024.1-201ENST00000474540 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
AP001024.1-201ENST00000474540 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
AP001024.1-201ENST00000474540 SHROOM4Q9ULL8 1493 aa20.54■□□□□ 0.88
AP001024.1-201ENST00000474540 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
AP001024.1-201ENST00000474540 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
AP001024.1-201ENST00000474540 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
AP001024.1-201ENST00000474540 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.81
AP001024.1-201ENST00000474540 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
AP001024.1-201ENST00000474540 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
AP001024.1-201ENST00000474540 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
AP001024.1-201ENST00000474540 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
AP001024.1-201ENST00000474540 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
AP001024.1-201ENST00000474540 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
AP001024.1-201ENST00000474540 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
AP001024.1-201ENST00000474540 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
AP001024.1-201ENST00000474540 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
AP001024.1-201ENST00000474540 WIZO95785 1651 aa19.4■□□□□ 0.7
AP001024.1-201ENST00000474540 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
AP001024.1-201ENST00000474540 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
AP001024.1-201ENST00000474540 NESP48681 1621 aa19.25■□□□□ 0.67
AP001024.1-201ENST00000474540 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
AP001024.1-201ENST00000474540 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
AP001024.1-201ENST00000474540 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
AP001024.1-201ENST00000474540 PDS5BQ9NTI5 1447 aa19.12■□□□□ 0.65
AP001024.1-201ENST00000474540 CUX2O14529 1486 aa19.09■□□□□ 0.65
AP001024.1-201ENST00000474540 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
AP001024.1-201ENST00000474540 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
AP001024.1-201ENST00000474540 CFTRP13569 1480 aa18.98■□□□□ 0.63
AP001024.1-201ENST00000474540 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
AP001024.1-201ENST00000474540 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
AP001024.1-201ENST00000474540 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
AP001024.1-201ENST00000474540 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
AP001024.1-201ENST00000474540 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
AP001024.1-201ENST00000474540 WDR62O43379 1518 aa18.84■□□□□ 0.61
AP001024.1-201ENST00000474540 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
AP001024.1-201ENST00000474540 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
AP001024.1-201ENST00000474540 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
AP001024.1-201ENST00000474540 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
AP001024.1-201ENST00000474540 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
AP001024.1-201ENST00000474540 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
AP001024.1-201ENST00000474540 IFT140Q96RY7 1462 aa18.54■□□□□ 0.56
AP001024.1-201ENST00000474540 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
AP001024.1-201ENST00000474540 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
AP001024.1-201ENST00000474540 CUX1P39880 1505 aa18.4■□□□□ 0.54
AP001024.1-201ENST00000474540 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.54
AP001024.1-201ENST00000474540 SOGA1O94964 1423 aa18.39■□□□□ 0.53
AP001024.1-201ENST00000474540 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
AP001024.1-201ENST00000474540 TARBP1Q13395 1621 aaKnown RBP18.37■□□□□ 0.53
AP001024.1-201ENST00000474540 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
AP001024.1-201ENST00000474540 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.52
AP001024.1-201ENST00000474540 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
AP001024.1-201ENST00000474540 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
AP001024.1-201ENST00000474540 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
AP001024.1-201ENST00000474540 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
AP001024.1-201ENST00000474540 FBLN2P98095 1184 aa18.22■□□□□ 0.51
AP001024.1-201ENST00000474540 TOP2BQ02880 1626 aa18.22■□□□□ 0.51
AP001024.1-201ENST00000474540 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
AP001024.1-201ENST00000474540 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
AP001024.1-201ENST00000474540 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
AP001024.1-201ENST00000474540 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
AP001024.1-201ENST00000474540 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
AP001024.1-201ENST00000474540 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
AP001024.1-201ENST00000474540 CHD1O14646 1710 aa18.15■□□□□ 0.5
AP001024.1-201ENST00000474540 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
AP001024.1-201ENST00000474540 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
AP001024.1-201ENST00000474540 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
AP001024.1-201ENST00000474540 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
AP001024.1-201ENST00000474540 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
AP001024.1-201ENST00000474540 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
AP001024.1-201ENST00000474540 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
AP001024.1-201ENST00000474540 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
AP001024.1-201ENST00000474540 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
AP001024.1-201ENST00000474540 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
AP001024.1-201ENST00000474540 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
AP001024.1-201ENST00000474540 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
AP001024.1-201ENST00000474540 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
AP001024.1-201ENST00000474540 GRIN2AQ12879 1464 aa17.94■□□□□ 0.46
AP001024.1-201ENST00000474540 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
AP001024.1-201ENST00000474540 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
AP001024.1-201ENST00000474540 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
AP001024.1-201ENST00000474540 CEP170Q5SW79 1584 aa17.83■□□□□ 0.45
AP001024.1-201ENST00000474540 NUP160Q12769 1436 aa17.83■□□□□ 0.45
AP001024.1-201ENST00000474540 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
AP001024.1-201ENST00000474540 CUL7Q14999 1698 aa17.81■□□□□ 0.44
AP001024.1-201ENST00000474540 IGF1RP08069 1367 aa17.8■□□□□ 0.44
AP001024.1-201ENST00000474540 CARMIL1Q5VZK9 1371 aa17.75■□□□□ 0.43
AP001024.1-201ENST00000474540 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
AP001024.1-201ENST00000474540 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
AP001024.1-201ENST00000474540 JPH4Q96JJ6 628 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms