RNA–Protein interactions for RNA: ENST00000474466.5

HM13-215, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-215ENST00000474466 NISCHQ9Y2I1 1504 aa24.94■■□□□ 1.58
HM13-215ENST00000474466 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
HM13-215ENST00000474466 ABCC9O60706 1549 aa21.53■■□□□ 1.04
HM13-215ENST00000474466 RB1CC1Q8TDY2 1594 aa20.82■□□□□ 0.92
HM13-215ENST00000474466 NACADO15069 1562 aa20.81■□□□□ 0.92
HM13-215ENST00000474466 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
HM13-215ENST00000474466 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
HM13-215ENST00000474466 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
HM13-215ENST00000474466 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
HM13-215ENST00000474466 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
HM13-215ENST00000474466 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
HM13-215ENST00000474466 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
HM13-215ENST00000474466 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
HM13-215ENST00000474466 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
HM13-215ENST00000474466 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
HM13-215ENST00000474466 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
HM13-215ENST00000474466 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
HM13-215ENST00000474466 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
HM13-215ENST00000474466 CECR2Q9BXF3 1484 aa19.39■□□□□ 0.69
HM13-215ENST00000474466 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
HM13-215ENST00000474466 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
HM13-215ENST00000474466 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
HM13-215ENST00000474466 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
HM13-215ENST00000474466 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
HM13-215ENST00000474466 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
HM13-215ENST00000474466 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
HM13-215ENST00000474466 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
HM13-215ENST00000474466 HMGXB3Q12766 1538 aa19.12■□□□□ 0.65
HM13-215ENST00000474466 WIZO95785 1651 aa19.05■□□□□ 0.64
HM13-215ENST00000474466 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
HM13-215ENST00000474466 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
HM13-215ENST00000474466 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
HM13-215ENST00000474466 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
HM13-215ENST00000474466 NESP48681 1621 aa18.66■□□□□ 0.58
HM13-215ENST00000474466 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
HM13-215ENST00000474466 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
HM13-215ENST00000474466 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
HM13-215ENST00000474466 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
HM13-215ENST00000474466 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
HM13-215ENST00000474466 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
HM13-215ENST00000474466 CFTRP13569 1480 aa18.52■□□□□ 0.55
HM13-215ENST00000474466 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
HM13-215ENST00000474466 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
HM13-215ENST00000474466 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
HM13-215ENST00000474466 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
HM13-215ENST00000474466 CUX2O14529 1486 aa18.35■□□□□ 0.53
HM13-215ENST00000474466 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.52
HM13-215ENST00000474466 WDR62O43379 1518 aa18.29■□□□□ 0.52
HM13-215ENST00000474466 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
HM13-215ENST00000474466 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
HM13-215ENST00000474466 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
HM13-215ENST00000474466 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
HM13-215ENST00000474466 CUX1P39880 1505 aa18.02■□□□□ 0.47
HM13-215ENST00000474466 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
HM13-215ENST00000474466 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
HM13-215ENST00000474466 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
HM13-215ENST00000474466 BIVM-ERCC5R4GMW8 1640 aa17.96■□□□□ 0.47
HM13-215ENST00000474466 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
HM13-215ENST00000474466 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
HM13-215ENST00000474466 WRNQ14191 1432 aaPredicted RBP eCLIP17.92■□□□□ 0.46
HM13-215ENST00000474466 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
HM13-215ENST00000474466 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
HM13-215ENST00000474466 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
HM13-215ENST00000474466 SOGA1O94964 1423 aa17.87■□□□□ 0.45
HM13-215ENST00000474466 RAD54L2Q9Y4B4 1467 aa17.87■□□□□ 0.45
HM13-215ENST00000474466 ZNF608Q9ULD9 1512 aaPredicted RBP17.87■□□□□ 0.45
HM13-215ENST00000474466 ABCA10Q8WWZ4 1543 aa17.78■□□□□ 0.44
HM13-215ENST00000474466 AQRO60306 1485 aaKnown RBP eCLIP17.77■□□□□ 0.441e-7■■■■■ 32.7
HM13-215ENST00000474466 PBRM1Q86U86 1689 aa17.75■□□□□ 0.43
HM13-215ENST00000474466 ABCA5Q8WWZ7 1642 aa17.75■□□□□ 0.43
HM13-215ENST00000474466 TDRD9Q8NDG6 1382 aaKnown RBP17.74■□□□□ 0.43
HM13-215ENST00000474466 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
HM13-215ENST00000474466 CHD1O14646 1710 aa17.68■□□□□ 0.42
HM13-215ENST00000474466 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
HM13-215ENST00000474466 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
HM13-215ENST00000474466 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
HM13-215ENST00000474466 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
HM13-215ENST00000474466 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
HM13-215ENST00000474466 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
HM13-215ENST00000474466 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
HM13-215ENST00000474466 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
HM13-215ENST00000474466 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
HM13-215ENST00000474466 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
HM13-215ENST00000474466 FBLN2P98095 1184 aa17.5■□□□□ 0.39
HM13-215ENST00000474466 CUL7Q14999 1698 aa17.49■□□□□ 0.39
HM13-215ENST00000474466 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
HM13-215ENST00000474466 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
HM13-215ENST00000474466 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
HM13-215ENST00000474466 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
HM13-215ENST00000474466 IGF1RP08069 1367 aa17.42■□□□□ 0.38
HM13-215ENST00000474466 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
HM13-215ENST00000474466 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
HM13-215ENST00000474466 NUP160Q12769 1436 aa17.37■□□□□ 0.37
HM13-215ENST00000474466 RIMBP3CA6NJZ7 1639 aa17.35■□□□□ 0.37
HM13-215ENST00000474466 RIMBP3BA6NNM3 1639 aa17.35■□□□□ 0.37
HM13-215ENST00000474466 RIMBP3Q9UFD9 1639 aa17.35■□□□□ 0.37
HM13-215ENST00000474466 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
HM13-215ENST00000474466 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
HM13-215ENST00000474466 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
HM13-215ENST00000474466 EEA1Q15075 1411 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms