RNA–Protein interactions for RNA: ENST00000474461.1

SAMD11-208, Transcript of sterile alpha motif domain containing 11, humanhuman

TSL 5

Gene SAMD11, Length 862 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD11-208ENST00000474461 NISCHQ9Y2I1 1504 aa47.33■■■■■ 5.17
SAMD11-208ENST00000474461 CCDC180Q9P1Z9 1646 aa42.31■■■■■ 4.36
SAMD11-208ENST00000474461 ABCC9O60706 1549 aa42.05■■■■■ 4.32
SAMD11-208ENST00000474461 RB1CC1Q8TDY2 1594 aa40.13■■■■■ 4.01
SAMD11-208ENST00000474461 DCAF8L2P0C7V8 631 aa39.91■■■■□ 3.98
SAMD11-208ENST00000474461 NACADO15069 1562 aa39.89■■■■□ 3.98
SAMD11-208ENST00000474461 DNAJC5BQ9UF47 199 aa39.73■■■■□ 3.95
SAMD11-208ENST00000474461 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
SAMD11-208ENST00000474461 ZCCHC6Q5VYS8 1495 aaKnown RBP39.3■■■■□ 3.88
SAMD11-208ENST00000474461 UNC13AQ9UPW8 1703 aa39.29■■■■□ 3.88
SAMD11-208ENST00000474461 PABPN1Q86U42 306 aaKnown RBP eCLIP39.21■■■■□ 3.87
SAMD11-208ENST00000474461 DCAF1Q9Y4B6 1507 aa39.04■■■■□ 3.84
SAMD11-208ENST00000474461 BICRAQ9NZM4 1560 aa38.95■■■■□ 3.83
SAMD11-208ENST00000474461 SCRIBQ14160 1630 aa38.68■■■■□ 3.78
SAMD11-208ENST00000474461 SHROOM4Q9ULL8 1493 aa38.36■■■■□ 3.73
SAMD11-208ENST00000474461 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
SAMD11-208ENST00000474461 EIF4G1Q04637 1599 aaKnown RBP37.97■■■■□ 3.67
SAMD11-208ENST00000474461 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
SAMD11-208ENST00000474461 SMARCA4P51532 1647 aa36.88■■■■□ 3.49
SAMD11-208ENST00000474461 NCAPD3P42695 1498 aa36.81■■■■□ 3.48
SAMD11-208ENST00000474461 ATAD2BQ9ULI0 1458 aa36.79■■■■□ 3.48
SAMD11-208ENST00000474461 BAZ1AQ9NRL2 1556 aaPredicted RBP36.72■■■■□ 3.47
SAMD11-208ENST00000474461 SMARCA2P51531 1590 aa36.7■■■■□ 3.47
SAMD11-208ENST00000474461 HMGXB3Q12766 1538 aa36.59■■■■□ 3.45
SAMD11-208ENST00000474461 DNAJC5Q9H3Z4 198 aa36.55■■■■□ 3.44
SAMD11-208ENST00000474461 MROH2BQ7Z745 1585 aa36.52■■■■□ 3.44
SAMD11-208ENST00000474461 BAZ1BQ9UIG0 1483 aaKnown RBP36.49■■■■□ 3.43
SAMD11-208ENST00000474461 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
SAMD11-208ENST00000474461 ERCC6Q03468 1493 aa36.27■■■■□ 3.4
SAMD11-208ENST00000474461 NESP48681 1621 aa36.23■■■■□ 3.39
SAMD11-208ENST00000474461 CUX2O14529 1486 aa36.16■■■■□ 3.38
SAMD11-208ENST00000474461 WIZO95785 1651 aa36.13■■■■□ 3.37
SAMD11-208ENST00000474461 LAMC3Q9Y6N6 1575 aa35.97■■■■□ 3.35
SAMD11-208ENST00000474461 RSF1Q96T23 1441 aaPredicted RBP35.85■■■■□ 3.33
SAMD11-208ENST00000474461 KIF21AQ7Z4S6 1674 aa35.8■■■■□ 3.32
SAMD11-208ENST00000474461 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.31
SAMD11-208ENST00000474461 CADPSQ9ULU8 1353 aa35.74■■■■□ 3.31
SAMD11-208ENST00000474461 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
SAMD11-208ENST00000474461 TOP2AP11388 1531 aaKnown RBP35.64■■■■□ 3.3
SAMD11-208ENST00000474461 MRC2Q9UBG0 1479 aa35.43■■■■□ 3.26
SAMD11-208ENST00000474461 CFTRP13569 1480 aa35.4■■■■□ 3.26
SAMD11-208ENST00000474461 CEP164Q9UPV0 1460 aa35.38■■■■□ 3.25
SAMD11-208ENST00000474461 FANCD2Q9BXW9 1451 aa35.37■■■■□ 3.25
SAMD11-208ENST00000474461 WDR62O43379 1518 aa35.32■■■■□ 3.25
SAMD11-208ENST00000474461 CCDC88BA6NC98 1476 aa35.24■■■■□ 3.23
SAMD11-208ENST00000474461 PRDM2Q13029 1718 aa35.15■■■■□ 3.22
SAMD11-208ENST00000474461 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
SAMD11-208ENST00000474461 TRIM41Q8WV44 630 aa34.97■■■■□ 3.19
SAMD11-208ENST00000474461 TOPBP1Q92547 1522 aa34.74■■■■□ 3.15
SAMD11-208ENST00000474461 DNMBPQ6XZF7 1577 aa34.64■■■■□ 3.14
SAMD11-208ENST00000474461 SUPT5HO00267 1087 aaKnown RBP34.63■■■■□ 3.13
SAMD11-208ENST00000474461 IFT140Q96RY7 1462 aa34.63■■■■□ 3.13
SAMD11-208ENST00000474461 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
SAMD11-208ENST00000474461 OSCARQ8IYS5 282 aa34.62■■■■□ 3.13
SAMD11-208ENST00000474461 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
SAMD11-208ENST00000474461 EIF4G3O43432 1585 aaKnown RBP34.43■■■■□ 3.1
SAMD11-208ENST00000474461 TARBP1Q13395 1621 aaKnown RBP34.41■■■■□ 3.1
SAMD11-208ENST00000474461 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
SAMD11-208ENST00000474461 AQRO60306 1485 aaKnown RBP eCLIP34.33■■■■□ 3.09
SAMD11-208ENST00000474461 RAD54L2Q9Y4B4 1467 aa34.31■■■■□ 3.08
SAMD11-208ENST00000474461 CUX1P39880 1505 aa34.28■■■■□ 3.08
SAMD11-208ENST00000474461 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
SAMD11-208ENST00000474461 SOGA1O94964 1423 aa34.25■■■■□ 3.07
SAMD11-208ENST00000474461 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
SAMD11-208ENST00000474461 RIMBP3CA6NJZ7 1639 aa34.15■■■■□ 3.06
SAMD11-208ENST00000474461 RIMBP3BA6NNM3 1639 aa34.15■■■■□ 3.06
SAMD11-208ENST00000474461 RIMBP3Q9UFD9 1639 aa34.15■■■■□ 3.06
SAMD11-208ENST00000474461 CHD1O14646 1710 aa34.13■■■■□ 3.05
SAMD11-208ENST00000474461 FBLN2P98095 1184 aa34.07■■■■□ 3.04
SAMD11-208ENST00000474461 WDR97A6NE52 1622 aa34.01■■■■□ 3.04
SAMD11-208ENST00000474461 ARHGEF11O15085 1522 aa34■■■■□ 3.03
SAMD11-208ENST00000474461 SNAPC4Q5SXM2 1469 aa33.98■■■■□ 3.03
SAMD11-208ENST00000474461 CYB5RLQ6IPT4 315 aa33.91■■■■□ 3.02
SAMD11-208ENST00000474461 GRIN2BQ13224 1484 aa33.9■■■■□ 3.02
SAMD11-208ENST00000474461 PBRM1Q86U86 1689 aa33.87■■■■□ 3.01
SAMD11-208ENST00000474461 MAGI1Q96QZ7 1491 aaPredicted RBP33.85■■■■□ 3.01
SAMD11-208ENST00000474461 ABCA10Q8WWZ4 1543 aa33.84■■■■□ 3.01
SAMD11-208ENST00000474461 GAPVD1Q14C86 1478 aa33.84■■■■□ 3.01
SAMD11-208ENST00000474461 SYNJ1O43426 1573 aa33.83■■■■□ 3.01
SAMD11-208ENST00000474461 WRNQ14191 1432 aaPredicted RBP eCLIP33.83■■■■□ 3.01
SAMD11-208ENST00000474461 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3.01
SAMD11-208ENST00000474461 CHMP7Q8WUX9 453 aaPredicted RBP33.82■■■■□ 3
SAMD11-208ENST00000474461 TOP2BQ02880 1626 aa33.82■■■■□ 3
SAMD11-208ENST00000474461 ABCA5Q8WWZ7 1642 aa33.8■■■■□ 3
SAMD11-208ENST00000474461 SYNJ2O15056 1496 aa33.75■■■□□ 2.99
SAMD11-208ENST00000474461 CLASP1Q7Z460 1538 aa33.68■■■□□ 2.98
SAMD11-208ENST00000474461 ARAP1Q96P48 1450 aa33.67■■■□□ 2.98
SAMD11-208ENST00000474461 TRHP20396 242 aaPredicted RBP33.61■■■□□ 2.97
SAMD11-208ENST00000474461 ADAMTS12P58397 1594 aa33.53■■■□□ 2.96
SAMD11-208ENST00000474461 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
SAMD11-208ENST00000474461 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
SAMD11-208ENST00000474461 FHAD1B1AJZ9 1412 aa33.4■■■□□ 2.94
SAMD11-208ENST00000474461 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
SAMD11-208ENST00000474461 NUP160Q12769 1436 aa33.32■■■□□ 2.92
SAMD11-208ENST00000474461 ERCC6L2Q5T890 1561 aa33.25■■■□□ 2.91
SAMD11-208ENST00000474461 SHROOM2Q13796 1616 aa33.16■■■□□ 2.9
SAMD11-208ENST00000474461 KIF27Q86VH2 1401 aa33.15■■■□□ 2.9
SAMD11-208ENST00000474461 IGF1RP08069 1367 aa33.09■■■□□ 2.89
SAMD11-208ENST00000474461 RUSC2Q8N2Y8 1516 aa33.06■■■□□ 2.88
SAMD11-208ENST00000474461 CUL7Q14999 1698 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms