RNA–Protein interactions for RNA: ENST00000474403.1

SIT1-202, Transcript of signaling threshold regulating transmembrane adaptor 1, humanhuman

TSL 2

Gene SIT1, Length 933 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1-202ENST00000474403 NISCHQ9Y2I1 1504 aa42.24■■■■■ 4.35
SIT1-202ENST00000474403 CCDC180Q9P1Z9 1646 aa37.7■■■■□ 3.63
SIT1-202ENST00000474403 ABCC9O60706 1549 aa37.03■■■■□ 3.52
SIT1-202ENST00000474403 RB1CC1Q8TDY2 1594 aa35.49■■■■□ 3.27
SIT1-202ENST00000474403 ZCCHC6Q5VYS8 1495 aaKnown RBP35.47■■■■□ 3.27
SIT1-202ENST00000474403 NACADO15069 1562 aa35.37■■■■□ 3.25
SIT1-202ENST00000474403 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
SIT1-202ENST00000474403 DCAF1Q9Y4B6 1507 aa35.09■■■■□ 3.21
SIT1-202ENST00000474403 MYO15BQ96JP2 1530 aa35.03■■■■□ 3.2
SIT1-202ENST00000474403 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
SIT1-202ENST00000474403 BICRAQ9NZM4 1560 aa34.54■■■■□ 3.12
SIT1-202ENST00000474403 PABPN1Q86U42 306 aaKnown RBP eCLIP34.47■■■■□ 3.11
SIT1-202ENST00000474403 SCRIBQ14160 1630 aa34.41■■■■□ 3.1
SIT1-202ENST00000474403 DNAJC5BQ9UF47 199 aa34.14■■■■□ 3.06
SIT1-202ENST00000474403 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
SIT1-202ENST00000474403 EIF4G1Q04637 1599 aaKnown RBP33.6■■■□□ 2.97
SIT1-202ENST00000474403 CC2D2AQ9P2K1 1620 aa33.54■■■□□ 2.96
SIT1-202ENST00000474403 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
SIT1-202ENST00000474403 SMARCA4P51532 1647 aa32.86■■■□□ 2.85
SIT1-202ENST00000474403 BAZ1AQ9NRL2 1556 aaPredicted RBP32.71■■■□□ 2.83
SIT1-202ENST00000474403 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
SIT1-202ENST00000474403 NCAPD3P42695 1498 aa32.58■■■□□ 2.81
SIT1-202ENST00000474403 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
SIT1-202ENST00000474403 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
SIT1-202ENST00000474403 MROH2BQ7Z745 1585 aa32.55■■■□□ 2.8
SIT1-202ENST00000474403 HMGXB3Q12766 1538 aa32.51■■■□□ 2.79
SIT1-202ENST00000474403 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
SIT1-202ENST00000474403 SUPT5HO00267 1087 aaKnown RBP32.46■■■□□ 2.79
SIT1-202ENST00000474403 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
SIT1-202ENST00000474403 WIZO95785 1651 aa32.27■■■□□ 2.76
SIT1-202ENST00000474403 TOP2AP11388 1531 aaKnown RBP32.05■■■□□ 2.72
SIT1-202ENST00000474403 NESP48681 1621 aa32.03■■■□□ 2.72
SIT1-202ENST00000474403 ERCC6Q03468 1493 aa31.86■■■□□ 2.69
SIT1-202ENST00000474403 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
SIT1-202ENST00000474403 KIF21AQ7Z4S6 1674 aa31.77■■■□□ 2.68
SIT1-202ENST00000474403 THOC2Q8NI27 1593 aaKnown RBP31.66■■■□□ 2.66
SIT1-202ENST00000474403 CUX2O14529 1486 aa31.6■■■□□ 2.65
SIT1-202ENST00000474403 CADPSQ9ULU8 1353 aa31.59■■■□□ 2.65
SIT1-202ENST00000474403 CCDC88BA6NC98 1476 aa31.58■■■□□ 2.65
SIT1-202ENST00000474403 PDS5BQ9NTI5 1447 aa31.5■■■□□ 2.63
SIT1-202ENST00000474403 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
SIT1-202ENST00000474403 CFTRP13569 1480 aa31.42■■■□□ 2.62
SIT1-202ENST00000474403 FANCD2Q9BXW9 1451 aa31.33■■■□□ 2.61
SIT1-202ENST00000474403 MRC2Q9UBG0 1479 aa31.31■■■□□ 2.6
SIT1-202ENST00000474403 CEP164Q9UPV0 1460 aa31.31■■■□□ 2.6
SIT1-202ENST00000474403 WDR62O43379 1518 aa31.28■■■□□ 2.6
SIT1-202ENST00000474403 URB2Q14146 1524 aaKnown RBP31.09■■■□□ 2.57
SIT1-202ENST00000474403 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
SIT1-202ENST00000474403 TOPBP1Q92547 1522 aa30.83■■■□□ 2.53
SIT1-202ENST00000474403 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
SIT1-202ENST00000474403 DNAJC5Q9H3Z4 198 aa30.79■■■□□ 2.52
SIT1-202ENST00000474403 ABCC8Q09428 1581 aa30.77■■■□□ 2.52
SIT1-202ENST00000474403 WRNQ14191 1432 aaPredicted RBP eCLIP30.71■■■□□ 2.51
SIT1-202ENST00000474403 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
SIT1-202ENST00000474403 IFT140Q96RY7 1462 aa30.62■■■□□ 2.49
SIT1-202ENST00000474403 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
SIT1-202ENST00000474403 TARBP1Q13395 1621 aaKnown RBP30.58■■■□□ 2.49
SIT1-202ENST00000474403 BIVM-ERCC5R4GMW8 1640 aa30.58■■■□□ 2.49
SIT1-202ENST00000474403 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
SIT1-202ENST00000474403 TOP2BQ02880 1626 aa30.56■■■□□ 2.48
SIT1-202ENST00000474403 CUX1P39880 1505 aa30.56■■■□□ 2.48
SIT1-202ENST00000474403 EIF4G3O43432 1585 aaKnown RBP30.55■■■□□ 2.48
SIT1-202ENST00000474403 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
SIT1-202ENST00000474403 FGD5Q6ZNL6 1462 aa30.46■■■□□ 2.47
SIT1-202ENST00000474403 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
SIT1-202ENST00000474403 WDR97A6NE52 1622 aa30.39■■■□□ 2.46
SIT1-202ENST00000474403 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.45
SIT1-202ENST00000474403 SOGA1O94964 1423 aa30.31■■■□□ 2.44
SIT1-202ENST00000474403 CHD1O14646 1710 aa30.29■■■□□ 2.44
SIT1-202ENST00000474403 EEA1Q15075 1411 aa30.22■■■□□ 2.43
SIT1-202ENST00000474403 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.43
SIT1-202ENST00000474403 PBRM1Q86U86 1689 aa30.19■■■□□ 2.42
SIT1-202ENST00000474403 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.41
SIT1-202ENST00000474403 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
SIT1-202ENST00000474403 OSCARQ8IYS5 282 aa30.1■■■□□ 2.41
SIT1-202ENST00000474403 SNAPC4Q5SXM2 1469 aa30.1■■■□□ 2.41
SIT1-202ENST00000474403 GRIN2BQ13224 1484 aa30.02■■■□□ 2.4
SIT1-202ENST00000474403 GAPVD1Q14C86 1478 aa30.01■■■□□ 2.4
SIT1-202ENST00000474403 MAGI1Q96QZ7 1491 aaPredicted RBP29.99■■■□□ 2.39
SIT1-202ENST00000474403 KIF27Q86VH2 1401 aa29.98■■■□□ 2.39
SIT1-202ENST00000474403 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
SIT1-202ENST00000474403 RIMBP3CA6NJZ7 1639 aa29.95■■■□□ 2.38
SIT1-202ENST00000474403 RIMBP3BA6NNM3 1639 aa29.95■■■□□ 2.38
SIT1-202ENST00000474403 RIMBP3Q9UFD9 1639 aa29.95■■■□□ 2.38
SIT1-202ENST00000474403 FAM9AQ8IZU1 332 aaPredicted RBP29.92■■■□□ 2.38
SIT1-202ENST00000474403 FBLN2P98095 1184 aa29.9■■■□□ 2.38
SIT1-202ENST00000474403 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
SIT1-202ENST00000474403 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
SIT1-202ENST00000474403 CSRNP3Q8WYN3 585 aa29.86■■■□□ 2.37
SIT1-202ENST00000474403 ARHGEF11O15085 1522 aa29.85■■■□□ 2.37
SIT1-202ENST00000474403 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
SIT1-202ENST00000474403 KIF21BO75037 1637 aa29.82■■■□□ 2.36
SIT1-202ENST00000474403 CHMP7Q8WUX9 453 aaPredicted RBP29.74■■■□□ 2.35
SIT1-202ENST00000474403 ERICH3Q5RHP9 1530 aa29.74■■■□□ 2.35
SIT1-202ENST00000474403 GOLGA3Q08378 1498 aa29.7■■■□□ 2.35
SIT1-202ENST00000474403 GRIN2AQ12879 1464 aa29.69■■■□□ 2.34
SIT1-202ENST00000474403 PRXQ9BXM0 1461 aa29.69■■■□□ 2.34
SIT1-202ENST00000474403 CUL7Q14999 1698 aa29.66■■■□□ 2.34
SIT1-202ENST00000474403 CEP170Q5SW79 1584 aa29.65■■■□□ 2.34
SIT1-202ENST00000474403 IGF1RP08069 1367 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms