RNA–Protein interactions for RNA: ENST00000474326.1

PFDN4-203, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-203ENST00000474326 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
PFDN4-203ENST00000474326 CCDC180Q9P1Z9 1646 aa36.32■■■■□ 3.4
PFDN4-203ENST00000474326 ABCC9O60706 1549 aa35.68■■■■□ 3.3
PFDN4-203ENST00000474326 RB1CC1Q8TDY2 1594 aa34.31■■■■□ 3.08
PFDN4-203ENST00000474326 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
PFDN4-203ENST00000474326 NACADO15069 1562 aa34.18■■■■□ 3.06
PFDN4-203ENST00000474326 MYO15BQ96JP2 1530 aa33.88■■■■□ 3.01
PFDN4-203ENST00000474326 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
PFDN4-203ENST00000474326 DCAF1Q9Y4B6 1507 aa33.65■■■□□ 2.98
PFDN4-203ENST00000474326 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
PFDN4-203ENST00000474326 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
PFDN4-203ENST00000474326 BICRAQ9NZM4 1560 aa33.12■■■□□ 2.89
PFDN4-203ENST00000474326 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
PFDN4-203ENST00000474326 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
PFDN4-203ENST00000474326 DNAJC5BQ9UF47 199 aa32.77■■■□□ 2.84
PFDN4-203ENST00000474326 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
PFDN4-203ENST00000474326 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
PFDN4-203ENST00000474326 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
PFDN4-203ENST00000474326 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
PFDN4-203ENST00000474326 BAZ1AQ9NRL2 1556 aaPredicted RBP31.61■■■□□ 2.65
PFDN4-203ENST00000474326 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
PFDN4-203ENST00000474326 NCAPD3P42695 1498 aa31.48■■■□□ 2.63
PFDN4-203ENST00000474326 ATAD2BQ9ULI0 1458 aa31.47■■■□□ 2.63
PFDN4-203ENST00000474326 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
PFDN4-203ENST00000474326 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
PFDN4-203ENST00000474326 PEG3Q9GZU2 1588 aa31.29■■■□□ 2.6
PFDN4-203ENST00000474326 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
PFDN4-203ENST00000474326 WIZO95785 1651 aa30.99■■■□□ 2.55
PFDN4-203ENST00000474326 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
PFDN4-203ENST00000474326 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
PFDN4-203ENST00000474326 NESP48681 1621 aa30.76■■■□□ 2.52
PFDN4-203ENST00000474326 LAMC3Q9Y6N6 1575 aa30.76■■■□□ 2.52
PFDN4-203ENST00000474326 TOP2AP11388 1531 aaKnown RBP30.69■■■□□ 2.5
PFDN4-203ENST00000474326 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
PFDN4-203ENST00000474326 CADPSQ9ULU8 1353 aa30.58■■■□□ 2.49
PFDN4-203ENST00000474326 CUX2O14529 1486 aa30.56■■■□□ 2.48
PFDN4-203ENST00000474326 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
PFDN4-203ENST00000474326 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
PFDN4-203ENST00000474326 CFTRP13569 1480 aa30.34■■■□□ 2.45
PFDN4-203ENST00000474326 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
PFDN4-203ENST00000474326 CEP164Q9UPV0 1460 aa30.28■■■□□ 2.44
PFDN4-203ENST00000474326 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
PFDN4-203ENST00000474326 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
PFDN4-203ENST00000474326 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
PFDN4-203ENST00000474326 WDR62O43379 1518 aa30.12■■■□□ 2.41
PFDN4-203ENST00000474326 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
PFDN4-203ENST00000474326 URB2Q14146 1524 aaKnown RBP29.91■■■□□ 2.38
PFDN4-203ENST00000474326 ABCC8Q09428 1581 aa29.8■■■□□ 2.36
PFDN4-203ENST00000474326 DNAJC5Q9H3Z4 198 aa29.79■■■□□ 2.36
PFDN4-203ENST00000474326 TOPBP1Q92547 1522 aa29.72■■■□□ 2.35
PFDN4-203ENST00000474326 DNMBPQ6XZF7 1577 aa29.71■■■□□ 2.35
PFDN4-203ENST00000474326 IFT140Q96RY7 1462 aa29.63■■■□□ 2.33
PFDN4-203ENST00000474326 POLA1P09884 1462 aaPredicted RBP29.45■■■□□ 2.31
PFDN4-203ENST00000474326 ZNF608Q9ULD9 1512 aaPredicted RBP29.43■■■□□ 2.3
PFDN4-203ENST00000474326 CUX1P39880 1505 aa29.4■■■□□ 2.3
PFDN4-203ENST00000474326 TARBP1Q13395 1621 aaKnown RBP29.38■■■□□ 2.29
PFDN4-203ENST00000474326 EIF4G3O43432 1585 aaKnown RBP29.38■■■□□ 2.29
PFDN4-203ENST00000474326 FGD5Q6ZNL6 1462 aa29.37■■■□□ 2.29
PFDN4-203ENST00000474326 SOGA1O94964 1423 aa29.37■■■□□ 2.29
PFDN4-203ENST00000474326 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
PFDN4-203ENST00000474326 OSCARQ8IYS5 282 aa29.27■■■□□ 2.28
PFDN4-203ENST00000474326 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.27
PFDN4-203ENST00000474326 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
PFDN4-203ENST00000474326 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
PFDN4-203ENST00000474326 TDRD9Q8NDG6 1382 aaKnown RBP29.19■■■□□ 2.26
PFDN4-203ENST00000474326 TOP2BQ02880 1626 aa29.14■■■□□ 2.26
PFDN4-203ENST00000474326 BIVM-ERCC5R4GMW8 1640 aa29.13■■■□□ 2.25
PFDN4-203ENST00000474326 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
PFDN4-203ENST00000474326 FBLN2P98095 1184 aa29.07■■■□□ 2.24
PFDN4-203ENST00000474326 ABCA10Q8WWZ4 1543 aa29.07■■■□□ 2.24
PFDN4-203ENST00000474326 GRIN2BQ13224 1484 aa29.06■■■□□ 2.24
PFDN4-203ENST00000474326 CHD1O14646 1710 aa29.04■■■□□ 2.24
PFDN4-203ENST00000474326 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
PFDN4-203ENST00000474326 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
PFDN4-203ENST00000474326 MAGI1Q96QZ7 1491 aaPredicted RBP29.01■■■□□ 2.23
PFDN4-203ENST00000474326 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
PFDN4-203ENST00000474326 ABCA5Q8WWZ7 1642 aa28.97■■■□□ 2.23
PFDN4-203ENST00000474326 CHMP7Q8WUX9 453 aaPredicted RBP28.95■■■□□ 2.22
PFDN4-203ENST00000474326 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
PFDN4-203ENST00000474326 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
PFDN4-203ENST00000474326 RIMBP3CA6NJZ7 1639 aa28.78■■■□□ 2.2
PFDN4-203ENST00000474326 RIMBP3BA6NNM3 1639 aa28.78■■■□□ 2.2
PFDN4-203ENST00000474326 RIMBP3Q9UFD9 1639 aa28.78■■■□□ 2.2
PFDN4-203ENST00000474326 ARHGEF11O15085 1522 aa28.75■■■□□ 2.19
PFDN4-203ENST00000474326 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
PFDN4-203ENST00000474326 ADAMTS12P58397 1594 aa28.73■■■□□ 2.19
PFDN4-203ENST00000474326 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
PFDN4-203ENST00000474326 CLASP1Q7Z460 1538 aa28.68■■■□□ 2.18
PFDN4-203ENST00000474326 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
PFDN4-203ENST00000474326 KIF27Q86VH2 1401 aa28.64■■■□□ 2.18
PFDN4-203ENST00000474326 CYB5RLQ6IPT4 315 aa28.52■■■□□ 2.16
PFDN4-203ENST00000474326 NUP160Q12769 1436 aa28.51■■■□□ 2.15
PFDN4-203ENST00000474326 CUL7Q14999 1698 aa28.5■■■□□ 2.15
PFDN4-203ENST00000474326 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
PFDN4-203ENST00000474326 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
PFDN4-203ENST00000474326 IGF1RP08069 1367 aa28.44■■■□□ 2.14
PFDN4-203ENST00000474326 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
PFDN4-203ENST00000474326 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
PFDN4-203ENST00000474326 RUSC2Q8N2Y8 1516 aa28.31■■■□□ 2.12
PFDN4-203ENST00000474326 JPH4Q96JJ6 628 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms